Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa

Despite considerable effort for surveillance of wild birds for avian influenza viruses (AIVs), empirical investigations of ecological drivers of AIV prevalence in wild birds are still scarce. Here we used a continental-scale dataset, collected in tropical wetlands of 15 African countries, to test the relative roles of a range of ecological factors on patterns of AIV prevalence in wildfowl. Seasonal and geographical variations in prevalence were positively related to the local density of the wildfowl community and to the wintering period of Eurasian migratory birds in Africa. The predominant influence of wildfowl density with no influence of climatic conditions suggests, in contrast to temperate regions, a predominant role for inter-individual transmission rather than transmission via long-lived virus persisting in the environment. Higher prevalences were found in Anas species than in non-Anas species even when we account for differences in their foraging behaviour (primarily dabbling or not) or their geographical origin (Eurasian or Afro-tropical), suggesting the existence of intrinsic differences between wildfowl taxonomic groups in receptivity to infection. Birds were found infected as often in oropharyngeal as in cloacal samples, but rarely for both types of sample concurrently, indicating that both respiratory and digestive tracts may be important for AIV replication. Keywords: influenza A virus; pathogen transmission; disease ecology; wild birds; tropical; migration.

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Main Authors: Gaidet, Nicolas, Caron, Alexandre, Cappelle, Julien, Cumming, Graeme S., Balança, Gilles, Hammoumi, Saliha, Cattoli, Giovanni, Abolnik, Célia, Servan de Almeida, Renata, Gil, Patricia, Fereidouni, Sasan R., Grosbois, Vladimir, Tran, Annelise, Mundava, Josephine, Fofana, Bouba, Ould El Mamy, Ahmed Bezeid, Ndlovu, Mduduzi, Mondain-Monval, J.Y., Triplet, Patrick, Hagemeijer, Ward, Karesh, William B., Newman, Scott, Dodman, Tim
Format: article biblioteca
Language:eng
Subjects:L73 - Maladies des animaux, L20 - Écologie animale, Influenzavirus aviaire, oiseau, animal sauvage, épidémiologie, climat tropical, facteur du milieu, migration animale, transmission des maladies, vecteur de maladie, Anas, canard, http://aims.fao.org/aos/agrovoc/c_9017, http://aims.fao.org/aos/agrovoc/c_935, http://aims.fao.org/aos/agrovoc/c_24103, http://aims.fao.org/aos/agrovoc/c_2615, http://aims.fao.org/aos/agrovoc/c_7973, http://aims.fao.org/aos/agrovoc/c_2594, http://aims.fao.org/aos/agrovoc/c_32926, http://aims.fao.org/aos/agrovoc/c_2329, http://aims.fao.org/aos/agrovoc/c_8164, http://aims.fao.org/aos/agrovoc/c_8786, http://aims.fao.org/aos/agrovoc/c_2406, http://aims.fao.org/aos/agrovoc/c_165, http://aims.fao.org/aos/agrovoc/c_2723,
Online Access:http://agritrop.cirad.fr/563531/
http://agritrop.cirad.fr/563531/1/document_563531.pdf
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id dig-cirad-fr-563531
record_format koha
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic L73 - Maladies des animaux
L20 - Écologie animale
Influenzavirus aviaire
oiseau
animal sauvage
épidémiologie
climat tropical
facteur du milieu
migration animale
transmission des maladies
vecteur de maladie
Anas
canard
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_7973
http://aims.fao.org/aos/agrovoc/c_2594
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_8786
http://aims.fao.org/aos/agrovoc/c_2406
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_2723
L73 - Maladies des animaux
L20 - Écologie animale
Influenzavirus aviaire
oiseau
animal sauvage
épidémiologie
climat tropical
facteur du milieu
migration animale
transmission des maladies
vecteur de maladie
Anas
canard
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_7973
http://aims.fao.org/aos/agrovoc/c_2594
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_8786
http://aims.fao.org/aos/agrovoc/c_2406
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_2723
spellingShingle L73 - Maladies des animaux
L20 - Écologie animale
Influenzavirus aviaire
oiseau
animal sauvage
épidémiologie
climat tropical
facteur du milieu
migration animale
transmission des maladies
vecteur de maladie
Anas
canard
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_7973
http://aims.fao.org/aos/agrovoc/c_2594
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_8786
http://aims.fao.org/aos/agrovoc/c_2406
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_2723
L73 - Maladies des animaux
L20 - Écologie animale
Influenzavirus aviaire
oiseau
animal sauvage
épidémiologie
climat tropical
facteur du milieu
migration animale
transmission des maladies
vecteur de maladie
Anas
canard
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_7973
http://aims.fao.org/aos/agrovoc/c_2594
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_8786
http://aims.fao.org/aos/agrovoc/c_2406
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_2723
Gaidet, Nicolas
Caron, Alexandre
Cappelle, Julien
Cumming, Graeme S.
Balança, Gilles
Hammoumi, Saliha
Cattoli, Giovanni
Abolnik, Célia
Servan de Almeida, Renata
Gil, Patricia
Fereidouni, Sasan R.
Grosbois, Vladimir
Tran, Annelise
Mundava, Josephine
Fofana, Bouba
Ould El Mamy, Ahmed Bezeid
Ndlovu, Mduduzi
Mondain-Monval, J.Y.
Triplet, Patrick
Hagemeijer, Ward
Karesh, William B.
Newman, Scott
Dodman, Tim
Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
description Despite considerable effort for surveillance of wild birds for avian influenza viruses (AIVs), empirical investigations of ecological drivers of AIV prevalence in wild birds are still scarce. Here we used a continental-scale dataset, collected in tropical wetlands of 15 African countries, to test the relative roles of a range of ecological factors on patterns of AIV prevalence in wildfowl. Seasonal and geographical variations in prevalence were positively related to the local density of the wildfowl community and to the wintering period of Eurasian migratory birds in Africa. The predominant influence of wildfowl density with no influence of climatic conditions suggests, in contrast to temperate regions, a predominant role for inter-individual transmission rather than transmission via long-lived virus persisting in the environment. Higher prevalences were found in Anas species than in non-Anas species even when we account for differences in their foraging behaviour (primarily dabbling or not) or their geographical origin (Eurasian or Afro-tropical), suggesting the existence of intrinsic differences between wildfowl taxonomic groups in receptivity to infection. Birds were found infected as often in oropharyngeal as in cloacal samples, but rarely for both types of sample concurrently, indicating that both respiratory and digestive tracts may be important for AIV replication. Keywords: influenza A virus; pathogen transmission; disease ecology; wild birds; tropical; migration.
format article
topic_facet L73 - Maladies des animaux
L20 - Écologie animale
Influenzavirus aviaire
oiseau
animal sauvage
épidémiologie
climat tropical
facteur du milieu
migration animale
transmission des maladies
vecteur de maladie
Anas
canard
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_935
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_7973
http://aims.fao.org/aos/agrovoc/c_2594
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_8786
http://aims.fao.org/aos/agrovoc/c_2406
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_2723
author Gaidet, Nicolas
Caron, Alexandre
Cappelle, Julien
Cumming, Graeme S.
Balança, Gilles
Hammoumi, Saliha
Cattoli, Giovanni
Abolnik, Célia
Servan de Almeida, Renata
Gil, Patricia
Fereidouni, Sasan R.
Grosbois, Vladimir
Tran, Annelise
Mundava, Josephine
Fofana, Bouba
Ould El Mamy, Ahmed Bezeid
Ndlovu, Mduduzi
Mondain-Monval, J.Y.
Triplet, Patrick
Hagemeijer, Ward
Karesh, William B.
Newman, Scott
Dodman, Tim
author_facet Gaidet, Nicolas
Caron, Alexandre
Cappelle, Julien
Cumming, Graeme S.
Balança, Gilles
Hammoumi, Saliha
Cattoli, Giovanni
Abolnik, Célia
Servan de Almeida, Renata
Gil, Patricia
Fereidouni, Sasan R.
Grosbois, Vladimir
Tran, Annelise
Mundava, Josephine
Fofana, Bouba
Ould El Mamy, Ahmed Bezeid
Ndlovu, Mduduzi
Mondain-Monval, J.Y.
Triplet, Patrick
Hagemeijer, Ward
Karesh, William B.
Newman, Scott
Dodman, Tim
author_sort Gaidet, Nicolas
title Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
title_short Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
title_full Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
title_fullStr Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
title_full_unstemmed Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa
title_sort understanding the ecological drivers of avian influenza virus infection in wildfowl : a continental-scale study across africa
url http://agritrop.cirad.fr/563531/
http://agritrop.cirad.fr/563531/1/document_563531.pdf
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spelling dig-cirad-fr-5635312024-01-28T20:13:34Z http://agritrop.cirad.fr/563531/ http://agritrop.cirad.fr/563531/ Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa. Gaidet Nicolas, Caron Alexandre, Cappelle Julien, Cumming Graeme S., Balança Gilles, Hammoumi Saliha, Cattoli Giovanni, Abolnik Célia, Servan de Almeida Renata, Gil Patricia, Fereidouni Sasan R., Grosbois Vladimir, Tran Annelise, Mundava Josephine, Fofana Bouba, Ould El Mamy Ahmed Bezeid, Ndlovu Mduduzi, Mondain-Monval J.Y., Triplet Patrick, Hagemeijer Ward, Karesh William B., Newman Scott, Dodman Tim. 2012. Proceedings - Royal Society. Biological Sciences, 279 (1731) : 1131-1141.https://doi.org/10.1098/rspb.2011.1417 <https://doi.org/10.1098/rspb.2011.1417> Understanding the ecological drivers of avian influenza virus infection in wildfowl : A continental-scale study across Africa Gaidet, Nicolas Caron, Alexandre Cappelle, Julien Cumming, Graeme S. Balança, Gilles Hammoumi, Saliha Cattoli, Giovanni Abolnik, Célia Servan de Almeida, Renata Gil, Patricia Fereidouni, Sasan R. Grosbois, Vladimir Tran, Annelise Mundava, Josephine Fofana, Bouba Ould El Mamy, Ahmed Bezeid Ndlovu, Mduduzi Mondain-Monval, J.Y. Triplet, Patrick Hagemeijer, Ward Karesh, William B. Newman, Scott Dodman, Tim eng 2012 Proceedings - Royal Society. Biological Sciences L73 - Maladies des animaux L20 - Écologie animale Influenzavirus aviaire oiseau animal sauvage épidémiologie climat tropical facteur du milieu migration animale transmission des maladies vecteur de maladie Anas canard http://aims.fao.org/aos/agrovoc/c_9017 http://aims.fao.org/aos/agrovoc/c_935 http://aims.fao.org/aos/agrovoc/c_24103 http://aims.fao.org/aos/agrovoc/c_2615 http://aims.fao.org/aos/agrovoc/c_7973 http://aims.fao.org/aos/agrovoc/c_2594 http://aims.fao.org/aos/agrovoc/c_32926 http://aims.fao.org/aos/agrovoc/c_2329 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_8786 http://aims.fao.org/aos/agrovoc/c_2406 Afrique Eurasie http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2723 Despite considerable effort for surveillance of wild birds for avian influenza viruses (AIVs), empirical investigations of ecological drivers of AIV prevalence in wild birds are still scarce. Here we used a continental-scale dataset, collected in tropical wetlands of 15 African countries, to test the relative roles of a range of ecological factors on patterns of AIV prevalence in wildfowl. Seasonal and geographical variations in prevalence were positively related to the local density of the wildfowl community and to the wintering period of Eurasian migratory birds in Africa. The predominant influence of wildfowl density with no influence of climatic conditions suggests, in contrast to temperate regions, a predominant role for inter-individual transmission rather than transmission via long-lived virus persisting in the environment. Higher prevalences were found in Anas species than in non-Anas species even when we account for differences in their foraging behaviour (primarily dabbling or not) or their geographical origin (Eurasian or Afro-tropical), suggesting the existence of intrinsic differences between wildfowl taxonomic groups in receptivity to infection. Birds were found infected as often in oropharyngeal as in cloacal samples, but rarely for both types of sample concurrently, indicating that both respiratory and digestive tracts may be important for AIV replication. Keywords: influenza A virus; pathogen transmission; disease ecology; wild birds; tropical; migration. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/563531/1/document_563531.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1098/rspb.2011.1417 10.1098/rspb.2011.1417 http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=214294 info:eu-repo/semantics/altIdentifier/doi/10.1098/rspb.2011.1417 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1098/rspb.2011.1417