The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae

Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed.

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Main Authors: Pieretti, Isabelle, Royer, Monique, Barbe, Valérie, Carrère, Sébastien, Koebnik, Ralf, Cociancich, Stéphane, Couloux, Arnaud, Darrasse, Armelle, Gouzy, Jérôme, Jacques, Marie Agnès, Lauber, Emmanuelle, Manceau, Charles, Mangenot, Sophie, Poussier, Stéphane, Segurens, Béatrice, Szurek, Boris, Verdier, Véronique, Arlat, Mathieu, Rott, Philippe
Format: article biblioteca
Language:eng
Published: Springer
Subjects:H20 - Maladies des plantes, Xanthomonas albilineans, Xylella fastidiosa, Xanthomonas, http://aims.fao.org/aos/agrovoc/c_27422, http://aims.fao.org/aos/agrovoc/c_35188, http://aims.fao.org/aos/agrovoc/c_8455, http://aims.fao.org/aos/agrovoc/c_3406, http://aims.fao.org/aos/agrovoc/c_3081,
Online Access:http://agritrop.cirad.fr/553366/
http://agritrop.cirad.fr/553366/1/document_553366.pdf
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spelling dig-cirad-fr-5533662024-12-18T13:09:08Z http://agritrop.cirad.fr/553366/ http://agritrop.cirad.fr/553366/ The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. Pieretti Isabelle, Royer Monique, Barbe Valérie, Carrère Sébastien, Koebnik Ralf, Cociancich Stéphane, Couloux Arnaud, Darrasse Armelle, Gouzy Jérôme, Jacques Marie Agnès, Lauber Emmanuelle, Manceau Charles, Mangenot Sophie, Poussier Stéphane, Segurens Béatrice, Szurek Boris, Verdier Véronique, Arlat Mathieu, Rott Philippe. 2009. BMC Genomics, 10 (616), 15 p.https://doi.org/10.1186/1471-2164-10-616 <https://doi.org/10.1186/1471-2164-10-616> The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae Pieretti, Isabelle Royer, Monique Barbe, Valérie Carrère, Sébastien Koebnik, Ralf Cociancich, Stéphane Couloux, Arnaud Darrasse, Armelle Gouzy, Jérôme Jacques, Marie Agnès Lauber, Emmanuelle Manceau, Charles Mangenot, Sophie Poussier, Stéphane Segurens, Béatrice Szurek, Boris Verdier, Véronique Arlat, Mathieu Rott, Philippe eng 2009 Springer BMC Genomics H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 Guadeloupe France http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/553366/1/document_553366.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1186/1471-2164-10-616 10.1186/1471-2164-10-616 info:eu-repo/semantics/altIdentifier/doi/10.1186/1471-2164-10-616 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1186/1471-2164-10-616
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
Xanthomonas albilineans
Xylella fastidiosa
Xanthomonas
http://aims.fao.org/aos/agrovoc/c_27422
http://aims.fao.org/aos/agrovoc/c_35188
http://aims.fao.org/aos/agrovoc/c_8455
http://aims.fao.org/aos/agrovoc/c_3406
http://aims.fao.org/aos/agrovoc/c_3081
H20 - Maladies des plantes
Xanthomonas albilineans
Xylella fastidiosa
Xanthomonas
http://aims.fao.org/aos/agrovoc/c_27422
http://aims.fao.org/aos/agrovoc/c_35188
http://aims.fao.org/aos/agrovoc/c_8455
http://aims.fao.org/aos/agrovoc/c_3406
http://aims.fao.org/aos/agrovoc/c_3081
spellingShingle H20 - Maladies des plantes
Xanthomonas albilineans
Xylella fastidiosa
Xanthomonas
http://aims.fao.org/aos/agrovoc/c_27422
http://aims.fao.org/aos/agrovoc/c_35188
http://aims.fao.org/aos/agrovoc/c_8455
http://aims.fao.org/aos/agrovoc/c_3406
http://aims.fao.org/aos/agrovoc/c_3081
H20 - Maladies des plantes
Xanthomonas albilineans
Xylella fastidiosa
Xanthomonas
http://aims.fao.org/aos/agrovoc/c_27422
http://aims.fao.org/aos/agrovoc/c_35188
http://aims.fao.org/aos/agrovoc/c_8455
http://aims.fao.org/aos/agrovoc/c_3406
http://aims.fao.org/aos/agrovoc/c_3081
Pieretti, Isabelle
Royer, Monique
Barbe, Valérie
Carrère, Sébastien
Koebnik, Ralf
Cociancich, Stéphane
Couloux, Arnaud
Darrasse, Armelle
Gouzy, Jérôme
Jacques, Marie Agnès
Lauber, Emmanuelle
Manceau, Charles
Mangenot, Sophie
Poussier, Stéphane
Segurens, Béatrice
Szurek, Boris
Verdier, Véronique
Arlat, Mathieu
Rott, Philippe
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
description Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed.
format article
topic_facet H20 - Maladies des plantes
Xanthomonas albilineans
Xylella fastidiosa
Xanthomonas
http://aims.fao.org/aos/agrovoc/c_27422
http://aims.fao.org/aos/agrovoc/c_35188
http://aims.fao.org/aos/agrovoc/c_8455
http://aims.fao.org/aos/agrovoc/c_3406
http://aims.fao.org/aos/agrovoc/c_3081
author Pieretti, Isabelle
Royer, Monique
Barbe, Valérie
Carrère, Sébastien
Koebnik, Ralf
Cociancich, Stéphane
Couloux, Arnaud
Darrasse, Armelle
Gouzy, Jérôme
Jacques, Marie Agnès
Lauber, Emmanuelle
Manceau, Charles
Mangenot, Sophie
Poussier, Stéphane
Segurens, Béatrice
Szurek, Boris
Verdier, Véronique
Arlat, Mathieu
Rott, Philippe
author_facet Pieretti, Isabelle
Royer, Monique
Barbe, Valérie
Carrère, Sébastien
Koebnik, Ralf
Cociancich, Stéphane
Couloux, Arnaud
Darrasse, Armelle
Gouzy, Jérôme
Jacques, Marie Agnès
Lauber, Emmanuelle
Manceau, Charles
Mangenot, Sophie
Poussier, Stéphane
Segurens, Béatrice
Szurek, Boris
Verdier, Véronique
Arlat, Mathieu
Rott, Philippe
author_sort Pieretti, Isabelle
title The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
title_short The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
title_full The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
title_fullStr The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
title_full_unstemmed The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
title_sort complete genome sequence of xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited xanthomonadaceae
publisher Springer
url http://agritrop.cirad.fr/553366/
http://agritrop.cirad.fr/553366/1/document_553366.pdf
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