The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed.
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Subjects: | H20 - Maladies des plantes, Xanthomonas albilineans, Xylella fastidiosa, Xanthomonas, http://aims.fao.org/aos/agrovoc/c_27422, http://aims.fao.org/aos/agrovoc/c_35188, http://aims.fao.org/aos/agrovoc/c_8455, http://aims.fao.org/aos/agrovoc/c_3406, http://aims.fao.org/aos/agrovoc/c_3081, |
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dig-cirad-fr-5533662024-12-18T13:09:08Z http://agritrop.cirad.fr/553366/ http://agritrop.cirad.fr/553366/ The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. Pieretti Isabelle, Royer Monique, Barbe Valérie, Carrère Sébastien, Koebnik Ralf, Cociancich Stéphane, Couloux Arnaud, Darrasse Armelle, Gouzy Jérôme, Jacques Marie Agnès, Lauber Emmanuelle, Manceau Charles, Mangenot Sophie, Poussier Stéphane, Segurens Béatrice, Szurek Boris, Verdier Véronique, Arlat Mathieu, Rott Philippe. 2009. BMC Genomics, 10 (616), 15 p.https://doi.org/10.1186/1471-2164-10-616 <https://doi.org/10.1186/1471-2164-10-616> The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae Pieretti, Isabelle Royer, Monique Barbe, Valérie Carrère, Sébastien Koebnik, Ralf Cociancich, Stéphane Couloux, Arnaud Darrasse, Armelle Gouzy, Jérôme Jacques, Marie Agnès Lauber, Emmanuelle Manceau, Charles Mangenot, Sophie Poussier, Stéphane Segurens, Béatrice Szurek, Boris Verdier, Véronique Arlat, Mathieu Rott, Philippe eng 2009 Springer BMC Genomics H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 Guadeloupe France http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/553366/1/document_553366.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1186/1471-2164-10-616 10.1186/1471-2164-10-616 info:eu-repo/semantics/altIdentifier/doi/10.1186/1471-2164-10-616 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1186/1471-2164-10-616 |
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H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 |
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H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 Pieretti, Isabelle Royer, Monique Barbe, Valérie Carrère, Sébastien Koebnik, Ralf Cociancich, Stéphane Couloux, Arnaud Darrasse, Armelle Gouzy, Jérôme Jacques, Marie Agnès Lauber, Emmanuelle Manceau, Charles Mangenot, Sophie Poussier, Stéphane Segurens, Béatrice Szurek, Boris Verdier, Véronique Arlat, Mathieu Rott, Philippe The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
description |
Background. The Xanthomonadaceae family contains two xylem-limited plant pathogenic bacterial species, Xanthomonas albilineans and Xylella fastidiosa. X. fastidiosa was the first completely sequenced plant pathogen. It is insect-vectored, has a reduced genome and does not possess hrp genes which encode a Type III secretion system found in most plant pathogenic bacteria. X. fastidiosa was excluded from the Xanthomonas group based on phylogenetic analyses with rRNA sequences. Results. The complete genome of X. albilineans was sequenced and annotated. X. albilineans, which is not known to be insect-vectored, also has a reduced genome and does not possess hrp genes. Phylogenetic analysis using X. albilineans genomic sequences showed that X. fastidiosa belongs to the Xanthomonas group. Order of divergence of the Xanthomonadaceae revealed that X. albilineans and X. fastidiosa experienced a convergent reductive genome evolution during their descent from the progenitor of the Xanthomonas genus. Reductive genome evolutions of the two xylem-limited Xanthomonadaceae were compared in light of their genome characteristics and those of obligate animal symbionts and pathogens. Conclusion. The two xylem-limited Xanthomonadaceae, during their descent from a common ancestral parent, experienced a convergent reductive genome evolution. Adaptation to the nutrient-poor xylem elements and to the cloistered environmental niche of xylem vessels probably favoured this convergent evolution. However, genome characteristics of X. albilineans differ from those of X. fastidiosa and obligate animal symbionts and pathogens, indicating that a distinctive process was responsible for the reductive genome evolution in this pathogen. The possible role in genome reduction of the unique toxin albicidin, produced by X. albilineans, is discussed. |
format |
article |
topic_facet |
H20 - Maladies des plantes Xanthomonas albilineans Xylella fastidiosa Xanthomonas http://aims.fao.org/aos/agrovoc/c_27422 http://aims.fao.org/aos/agrovoc/c_35188 http://aims.fao.org/aos/agrovoc/c_8455 http://aims.fao.org/aos/agrovoc/c_3406 http://aims.fao.org/aos/agrovoc/c_3081 |
author |
Pieretti, Isabelle Royer, Monique Barbe, Valérie Carrère, Sébastien Koebnik, Ralf Cociancich, Stéphane Couloux, Arnaud Darrasse, Armelle Gouzy, Jérôme Jacques, Marie Agnès Lauber, Emmanuelle Manceau, Charles Mangenot, Sophie Poussier, Stéphane Segurens, Béatrice Szurek, Boris Verdier, Véronique Arlat, Mathieu Rott, Philippe |
author_facet |
Pieretti, Isabelle Royer, Monique Barbe, Valérie Carrère, Sébastien Koebnik, Ralf Cociancich, Stéphane Couloux, Arnaud Darrasse, Armelle Gouzy, Jérôme Jacques, Marie Agnès Lauber, Emmanuelle Manceau, Charles Mangenot, Sophie Poussier, Stéphane Segurens, Béatrice Szurek, Boris Verdier, Véronique Arlat, Mathieu Rott, Philippe |
author_sort |
Pieretti, Isabelle |
title |
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
title_short |
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
title_full |
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
title_fullStr |
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
title_full_unstemmed |
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae |
title_sort |
complete genome sequence of xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited xanthomonadaceae |
publisher |
Springer |
url |
http://agritrop.cirad.fr/553366/ http://agritrop.cirad.fr/553366/1/document_553366.pdf |
work_keys_str_mv |
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