A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm

An immunocapture (IC) One-step RT-PCR assay was developed to improve the detection of Banana bract mosaic virus (BBrMV) in single and bulked samples of banana plants. In this paper, an atypical strain of BBrMV was described, the BBrMV "Ref" strain, and we showed that detection with available BBrMV tools using ELISA and RT-PCR approacheswas not reliable. Primer sets Bract N1/NR and N2/NR specific to BBrMV were designed and used in RT-PCR and IC-RT-PCR assays with two commercial kits that allow the RT and the PCR reactions to take place simultaneously in the same tube. The new assay enabled detection of BBrMV in leaf extract diluted up to 1×10-10 and in bulked samples of 10 plants, and was proposed as a new international standard to index BBrMV.

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Main Authors: Iskra Caruana, Marie-Line, Galzi, Serge, Laboureau, Nathalie
Format: article biblioteca
Language:eng
Subjects:H20 - Maladies des plantes, Musa, virus des végétaux, PCR, Test ELISA, diagnostic, germoplasme, http://aims.fao.org/aos/agrovoc/c_4993, http://aims.fao.org/aos/agrovoc/c_5985, http://aims.fao.org/aos/agrovoc/c_34079, http://aims.fao.org/aos/agrovoc/c_15968, http://aims.fao.org/aos/agrovoc/c_2238, http://aims.fao.org/aos/agrovoc/c_3249,
Online Access:http://agritrop.cirad.fr/546691/
http://agritrop.cirad.fr/546691/1/document_546691.pdf
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spelling dig-cirad-fr-5466912024-01-28T16:27:16Z http://agritrop.cirad.fr/546691/ http://agritrop.cirad.fr/546691/ A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm. Iskra Caruana Marie-Line, Galzi Serge, Laboureau Nathalie. 2008. Journal of Virological Methods, 153 (2) : 223-231.https://doi.org/10.1016/j.jviromet.2008.06.028 <https://doi.org/10.1016/j.jviromet.2008.06.028> A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm Iskra Caruana, Marie-Line Galzi, Serge Laboureau, Nathalie eng 2008 Journal of Virological Methods H20 - Maladies des plantes Musa virus des végétaux PCR Test ELISA diagnostic germoplasme http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_5985 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_15968 http://aims.fao.org/aos/agrovoc/c_2238 http://aims.fao.org/aos/agrovoc/c_3249 An immunocapture (IC) One-step RT-PCR assay was developed to improve the detection of Banana bract mosaic virus (BBrMV) in single and bulked samples of banana plants. In this paper, an atypical strain of BBrMV was described, the BBrMV "Ref" strain, and we showed that detection with available BBrMV tools using ELISA and RT-PCR approacheswas not reliable. Primer sets Bract N1/NR and N2/NR specific to BBrMV were designed and used in RT-PCR and IC-RT-PCR assays with two commercial kits that allow the RT and the PCR reactions to take place simultaneously in the same tube. The new assay enabled detection of BBrMV in leaf extract diluted up to 1×10-10 and in bulked samples of 10 plants, and was proposed as a new international standard to index BBrMV. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/546691/1/document_546691.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1016/j.jviromet.2008.06.028 10.1016/j.jviromet.2008.06.028 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.jviromet.2008.06.028 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.jviromet.2008.06.028
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
Musa
virus des végétaux
PCR
Test ELISA
diagnostic
germoplasme
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_34079
http://aims.fao.org/aos/agrovoc/c_15968
http://aims.fao.org/aos/agrovoc/c_2238
http://aims.fao.org/aos/agrovoc/c_3249
H20 - Maladies des plantes
Musa
virus des végétaux
PCR
Test ELISA
diagnostic
germoplasme
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_34079
http://aims.fao.org/aos/agrovoc/c_15968
http://aims.fao.org/aos/agrovoc/c_2238
http://aims.fao.org/aos/agrovoc/c_3249
spellingShingle H20 - Maladies des plantes
Musa
virus des végétaux
PCR
Test ELISA
diagnostic
germoplasme
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_34079
http://aims.fao.org/aos/agrovoc/c_15968
http://aims.fao.org/aos/agrovoc/c_2238
http://aims.fao.org/aos/agrovoc/c_3249
H20 - Maladies des plantes
Musa
virus des végétaux
PCR
Test ELISA
diagnostic
germoplasme
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_34079
http://aims.fao.org/aos/agrovoc/c_15968
http://aims.fao.org/aos/agrovoc/c_2238
http://aims.fao.org/aos/agrovoc/c_3249
Iskra Caruana, Marie-Line
Galzi, Serge
Laboureau, Nathalie
A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
description An immunocapture (IC) One-step RT-PCR assay was developed to improve the detection of Banana bract mosaic virus (BBrMV) in single and bulked samples of banana plants. In this paper, an atypical strain of BBrMV was described, the BBrMV "Ref" strain, and we showed that detection with available BBrMV tools using ELISA and RT-PCR approacheswas not reliable. Primer sets Bract N1/NR and N2/NR specific to BBrMV were designed and used in RT-PCR and IC-RT-PCR assays with two commercial kits that allow the RT and the PCR reactions to take place simultaneously in the same tube. The new assay enabled detection of BBrMV in leaf extract diluted up to 1×10-10 and in bulked samples of 10 plants, and was proposed as a new international standard to index BBrMV.
format article
topic_facet H20 - Maladies des plantes
Musa
virus des végétaux
PCR
Test ELISA
diagnostic
germoplasme
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_5985
http://aims.fao.org/aos/agrovoc/c_34079
http://aims.fao.org/aos/agrovoc/c_15968
http://aims.fao.org/aos/agrovoc/c_2238
http://aims.fao.org/aos/agrovoc/c_3249
author Iskra Caruana, Marie-Line
Galzi, Serge
Laboureau, Nathalie
author_facet Iskra Caruana, Marie-Line
Galzi, Serge
Laboureau, Nathalie
author_sort Iskra Caruana, Marie-Line
title A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
title_short A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
title_full A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
title_fullStr A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
title_full_unstemmed A reliable IC One-step RT-PCR method for the detection of BBrMV to ensure safe exchange of Musa germplasm
title_sort reliable ic one-step rt-pcr method for the detection of bbrmv to ensure safe exchange of musa germplasm
url http://agritrop.cirad.fr/546691/
http://agritrop.cirad.fr/546691/1/document_546691.pdf
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