Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe
The current microscopy method for identifying the Culicoides imicola Kieffer, 1913 species can be time and labour intensive. There is a need for the development of a rapid and quantitative tool to quantify the biting midges C. imicola ss in light trap catches. A reproducible and sensitive real-time polymerase chain reaction method that targets the internal transcribed spacer (ITS-1) of ribosomal DNA of C. imicola ss species was developed. This real-time PCR assay was first performed on 10-fold serial dilutions of purified plasmid DNA containing specific C. imicola ss ITS-1. It was then possible to construct standard curves with a high correlation coefficient (r2 = 0.99) in the range of 10_2-10_8 ng of purified DNA. The performances of this PCR were evaluated in comparison with morphological determination on Culicoides trapped along the Mediterranean coastal mainland France. ROC statistical analysis was carried out using morphology as gold standard and the area under the ROC curve had a satisfactory value of 0.9752. The results indicated that this real-time PCR assay holds promise for monitoring C. imicola ss population in both surveillance and research programmes because of its good specificity (92%) and sensitivity (95%).
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Subjects: | L72 - Organismes nuisibles des animaux, L73 - Maladies des animaux, Culicoides, PCR, identification, fièvre catarrhale ovine, peste équine africaine, vecteur de maladie, virus bluetongue, http://aims.fao.org/aos/agrovoc/c_10196, http://aims.fao.org/aos/agrovoc/c_34079, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_976, http://aims.fao.org/aos/agrovoc/c_34202, http://aims.fao.org/aos/agrovoc/c_8164, http://aims.fao.org/aos/agrovoc/c_9342, http://aims.fao.org/aos/agrovoc/c_165, http://aims.fao.org/aos/agrovoc/c_2724, |
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dig-cirad-fr-5448062024-12-18T14:17:57Z http://agritrop.cirad.fr/544806/ http://agritrop.cirad.fr/544806/ Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe. Cetre-Sossah Catherine, Mathieu Bruno, Setier-Rio Marie-Laure, Grillet Colette, Baldet Thierry, Delecolle Jean Claude, Albina Emmanuel. 2008. Research in Veterinary Science, 85 (2) : 372-382.https://doi.org/10.1016/j.rvsc.2007.12.001 <https://doi.org/10.1016/j.rvsc.2007.12.001> Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe Cetre-Sossah, Catherine Mathieu, Bruno Setier-Rio, Marie-Laure Grillet, Colette Baldet, Thierry Delecolle, Jean Claude Albina, Emmanuel eng 2008 Elsevier Research in Veterinary Science L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 Afrique Europe http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 The current microscopy method for identifying the Culicoides imicola Kieffer, 1913 species can be time and labour intensive. There is a need for the development of a rapid and quantitative tool to quantify the biting midges C. imicola ss in light trap catches. A reproducible and sensitive real-time polymerase chain reaction method that targets the internal transcribed spacer (ITS-1) of ribosomal DNA of C. imicola ss species was developed. This real-time PCR assay was first performed on 10-fold serial dilutions of purified plasmid DNA containing specific C. imicola ss ITS-1. It was then possible to construct standard curves with a high correlation coefficient (r2 = 0.99) in the range of 10_2-10_8 ng of purified DNA. The performances of this PCR were evaluated in comparison with morphological determination on Culicoides trapped along the Mediterranean coastal mainland France. ROC statistical analysis was carried out using morphology as gold standard and the area under the ROC curve had a satisfactory value of 0.9752. The results indicated that this real-time PCR assay holds promise for monitoring C. imicola ss population in both surveillance and research programmes because of its good specificity (92%) and sensitivity (95%). article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/544806/1/document_544806.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1016/j.rvsc.2007.12.001 10.1016/j.rvsc.2007.12.001 http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=163384 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.rvsc.2007.12.001 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.rvsc.2007.12.001 |
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L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 |
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L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 Cetre-Sossah, Catherine Mathieu, Bruno Setier-Rio, Marie-Laure Grillet, Colette Baldet, Thierry Delecolle, Jean Claude Albina, Emmanuel Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
description |
The current microscopy method for identifying the Culicoides imicola Kieffer, 1913 species can be time and labour intensive. There is a need for the development of a rapid and quantitative tool to quantify the biting midges C. imicola ss in light trap catches. A reproducible and sensitive real-time polymerase chain reaction method that targets the internal transcribed spacer (ITS-1) of ribosomal DNA of C. imicola ss species was developed. This real-time PCR assay was first performed on 10-fold serial dilutions of purified plasmid DNA containing specific C. imicola ss ITS-1. It was then possible to construct standard curves with a high correlation coefficient (r2 = 0.99) in the range of 10_2-10_8 ng of purified DNA. The performances of this PCR were evaluated in comparison with morphological determination on Culicoides trapped along the Mediterranean coastal mainland France. ROC statistical analysis was carried out using morphology as gold standard and the area under the ROC curve had a satisfactory value of 0.9752. The results indicated that this real-time PCR assay holds promise for monitoring C. imicola ss population in both surveillance and research programmes because of its good specificity (92%) and sensitivity (95%). |
format |
article |
topic_facet |
L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Culicoides PCR identification fièvre catarrhale ovine peste équine africaine vecteur de maladie virus bluetongue http://aims.fao.org/aos/agrovoc/c_10196 http://aims.fao.org/aos/agrovoc/c_34079 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_976 http://aims.fao.org/aos/agrovoc/c_34202 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_9342 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_2724 |
author |
Cetre-Sossah, Catherine Mathieu, Bruno Setier-Rio, Marie-Laure Grillet, Colette Baldet, Thierry Delecolle, Jean Claude Albina, Emmanuel |
author_facet |
Cetre-Sossah, Catherine Mathieu, Bruno Setier-Rio, Marie-Laure Grillet, Colette Baldet, Thierry Delecolle, Jean Claude Albina, Emmanuel |
author_sort |
Cetre-Sossah, Catherine |
title |
Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
title_short |
Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
title_full |
Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
title_fullStr |
Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
title_full_unstemmed |
Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe |
title_sort |
development and evaluation of a real-time quantitative pcr assay for culicoides imicola, one of the main vectors of bluetongue (bt) and african horse sickness (ahs) in africa and europe |
publisher |
Elsevier |
url |
http://agritrop.cirad.fr/544806/ http://agritrop.cirad.fr/544806/1/document_544806.pdf |
work_keys_str_mv |
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1819041883735719936 |