Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago
We present a study of the genetic diversity and structure of a tropical tree in an insular system. Santalum austrocaledonicum is endemic to the archipelago of New Caledonia and is exploited for oil extraction from heartwood. A total of 431 individuals over 17 populations were analysed for eight polymorphic microsatellite loci. The number of alleles per locus ranged from 3 to 33 and the observed heterozygosity per population ranged from 0.01 in Maré to 0.74 in Ile des Pins. The genetic diversity was lowest in the most recent islands, the Loyautés, and highest in the oldest island, Grande Terre, as well as the nearby small Ile des Pins. Significant departures from panmixia were observed for some loci-population combinations (per population FIS = 0-0.03 on Grande-Terre and Ile des Pins, and 0-0.67 on Loyautés). A strong genetic differentiation among all islands was observed (FsT = 0.22), and the amount of differentiation increased with geographic distance in Iles Loyauté and in Grande Terre. At both population and island levels, island age and isolation seem to be the main factors influencing the amount of genetic diversity. In particular, populations from recent islands had large average FIS that could not be entirely explained by null alleles or a Wahlund effect. This result suggests that, at least in some populations, selfing occurred extensively. Conclusively, our results indicate a strong influence of insularity on the genetic diversity and structure of Santalum austrocaledonicum.
Main Authors: | , , , , , |
---|---|
Format: | article biblioteca |
Language: | eng |
Subjects: | F30 - Génétique et amélioration des plantes, ressource génétique, flux de gènes, conservation des ressources, http://aims.fao.org/aos/agrovoc/c_3218, http://aims.fao.org/aos/agrovoc/c_37331, http://aims.fao.org/aos/agrovoc/c_6523, http://aims.fao.org/aos/agrovoc/c_5155, http://aims.fao.org/aos/agrovoc/c_3081, |
Online Access: | http://agritrop.cirad.fr/531529/ http://agritrop.cirad.fr/531529/1/531529.pdf |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
id |
dig-cirad-fr-531529 |
---|---|
record_format |
koha |
spelling |
dig-cirad-fr-5315292024-01-28T14:24:55Z http://agritrop.cirad.fr/531529/ http://agritrop.cirad.fr/531529/ Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago. Bottin Lorraine, Verhaegen Daniel, Tassin Jacques, Olivieri Isabelle, Vaillant Alexandre, Bouvet Jean-Marc. 2005. Molecular Ecology, 14 : 1979-1989.https://doi.org/10.1111/j.1365-294X.2005.02576.x <https://doi.org/10.1111/j.1365-294X.2005.02576.x> Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago Bottin, Lorraine Verhaegen, Daniel Tassin, Jacques Olivieri, Isabelle Vaillant, Alexandre Bouvet, Jean-Marc eng 2005 Molecular Ecology F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 Nouvelle-Calédonie France http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 We present a study of the genetic diversity and structure of a tropical tree in an insular system. Santalum austrocaledonicum is endemic to the archipelago of New Caledonia and is exploited for oil extraction from heartwood. A total of 431 individuals over 17 populations were analysed for eight polymorphic microsatellite loci. The number of alleles per locus ranged from 3 to 33 and the observed heterozygosity per population ranged from 0.01 in Maré to 0.74 in Ile des Pins. The genetic diversity was lowest in the most recent islands, the Loyautés, and highest in the oldest island, Grande Terre, as well as the nearby small Ile des Pins. Significant departures from panmixia were observed for some loci-population combinations (per population FIS = 0-0.03 on Grande-Terre and Ile des Pins, and 0-0.67 on Loyautés). A strong genetic differentiation among all islands was observed (FsT = 0.22), and the amount of differentiation increased with geographic distance in Iles Loyauté and in Grande Terre. At both population and island levels, island age and isolation seem to be the main factors influencing the amount of genetic diversity. In particular, populations from recent islands had large average FIS that could not be entirely explained by null alleles or a Wahlund effect. This result suggests that, at least in some populations, selfing occurred extensively. Conclusively, our results indicate a strong influence of insularity on the genetic diversity and structure of Santalum austrocaledonicum. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/531529/1/531529.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1111/j.1365-294X.2005.02576.x 10.1111/j.1365-294X.2005.02576.x http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=190574 info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1365-294X.2005.02576.x info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/j.1365-294X.2005.02576.x |
institution |
CIRAD FR |
collection |
DSpace |
country |
Francia |
countrycode |
FR |
component |
Bibliográfico |
access |
En linea |
databasecode |
dig-cirad-fr |
tag |
biblioteca |
region |
Europa del Oeste |
libraryname |
Biblioteca del CIRAD Francia |
language |
eng |
topic |
F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 |
spellingShingle |
F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 Bottin, Lorraine Verhaegen, Daniel Tassin, Jacques Olivieri, Isabelle Vaillant, Alexandre Bouvet, Jean-Marc Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
description |
We present a study of the genetic diversity and structure of a tropical tree in an insular system. Santalum austrocaledonicum is endemic to the archipelago of New Caledonia and is exploited for oil extraction from heartwood. A total of 431 individuals over 17 populations were analysed for eight polymorphic microsatellite loci. The number of alleles per locus ranged from 3 to 33 and the observed heterozygosity per population ranged from 0.01 in Maré to 0.74 in Ile des Pins. The genetic diversity was lowest in the most recent islands, the Loyautés, and highest in the oldest island, Grande Terre, as well as the nearby small Ile des Pins. Significant departures from panmixia were observed for some loci-population combinations (per population FIS = 0-0.03 on Grande-Terre and Ile des Pins, and 0-0.67 on Loyautés). A strong genetic differentiation among all islands was observed (FsT = 0.22), and the amount of differentiation increased with geographic distance in Iles Loyauté and in Grande Terre. At both population and island levels, island age and isolation seem to be the main factors influencing the amount of genetic diversity. In particular, populations from recent islands had large average FIS that could not be entirely explained by null alleles or a Wahlund effect. This result suggests that, at least in some populations, selfing occurred extensively. Conclusively, our results indicate a strong influence of insularity on the genetic diversity and structure of Santalum austrocaledonicum. |
format |
article |
topic_facet |
F30 - Génétique et amélioration des plantes ressource génétique flux de gènes conservation des ressources http://aims.fao.org/aos/agrovoc/c_3218 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_6523 http://aims.fao.org/aos/agrovoc/c_5155 http://aims.fao.org/aos/agrovoc/c_3081 |
author |
Bottin, Lorraine Verhaegen, Daniel Tassin, Jacques Olivieri, Isabelle Vaillant, Alexandre Bouvet, Jean-Marc |
author_facet |
Bottin, Lorraine Verhaegen, Daniel Tassin, Jacques Olivieri, Isabelle Vaillant, Alexandre Bouvet, Jean-Marc |
author_sort |
Bottin, Lorraine |
title |
Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
title_short |
Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
title_full |
Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
title_fullStr |
Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
title_full_unstemmed |
Genetic diversity and population structure of an insular tree, Santalum austrocaledonicum in New Caledonian archipelago |
title_sort |
genetic diversity and population structure of an insular tree, santalum austrocaledonicum in new caledonian archipelago |
url |
http://agritrop.cirad.fr/531529/ http://agritrop.cirad.fr/531529/1/531529.pdf |
work_keys_str_mv |
AT bottinlorraine geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago AT verhaegendaniel geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago AT tassinjacques geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago AT olivieriisabelle geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago AT vaillantalexandre geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago AT bouvetjeanmarc geneticdiversityandpopulationstructureofaninsulartreesantalumaustrocaledonicuminnewcaledonianarchipelago |
_version_ |
1792496419124281344 |