A new image of plantain diversity assessed by SSR, AFLP and MSAP markers

Using both SSR and AFLP markers, the genetic diversity of 30 plantains constituting a representative sample of the phenotypic diversity was assessed. The results confirmed a very narrow genetic base of this cultivar group. SSR and AFLP data support the hypothesis that these cultivars may have arisen from vegetative multiplication of a single seed. MSAP were used to survey cytosine methylation status at CCGG sites in order to obtain an alternative source of diversity data. A higher degree of polymorphism was revealed allowing the classification of the samples into three clusters. No correlation was observed between the phenotypic classification and methylation diversity. Implications for breeding programs are discussed.

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Bibliographic Details
Main Authors: Noyer, Jean-Louis, Causse, Sandrine, Tomekpé, Kodjo, Bouet, André, Baurens, Franc-Christophe
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, Musa, Musa acuminata, Musa balbisiana, biodiversité, germoplasme, marqueur génétique, microsatellite, polymorphisme génétique, http://aims.fao.org/aos/agrovoc/c_4993, http://aims.fao.org/aos/agrovoc/c_4994, http://aims.fao.org/aos/agrovoc/c_4995, http://aims.fao.org/aos/agrovoc/c_33949, http://aims.fao.org/aos/agrovoc/c_3249, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24031,
Online Access:http://agritrop.cirad.fr/528175/
http://agritrop.cirad.fr/528175/1/document_528175.pdf
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spelling dig-cirad-fr-5281752024-01-28T13:51:47Z http://agritrop.cirad.fr/528175/ http://agritrop.cirad.fr/528175/ A new image of plantain diversity assessed by SSR, AFLP and MSAP markers. Noyer Jean-Louis, Causse Sandrine, Tomekpé Kodjo, Bouet André, Baurens Franc-Christophe. 2005. Genetica, 124 : 61-69.https://doi.org/10.1007/s10709-004-7319-z <https://doi.org/10.1007/s10709-004-7319-z> A new image of plantain diversity assessed by SSR, AFLP and MSAP markers Noyer, Jean-Louis Causse, Sandrine Tomekpé, Kodjo Bouet, André Baurens, Franc-Christophe eng 2005 Genetica F30 - Génétique et amélioration des plantes Musa Musa acuminata Musa balbisiana biodiversité germoplasme marqueur génétique microsatellite polymorphisme génétique http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_4995 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3249 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24031 Using both SSR and AFLP markers, the genetic diversity of 30 plantains constituting a representative sample of the phenotypic diversity was assessed. The results confirmed a very narrow genetic base of this cultivar group. SSR and AFLP data support the hypothesis that these cultivars may have arisen from vegetative multiplication of a single seed. MSAP were used to survey cytosine methylation status at CCGG sites in order to obtain an alternative source of diversity data. A higher degree of polymorphism was revealed allowing the classification of the samples into three clusters. No correlation was observed between the phenotypic classification and methylation diversity. Implications for breeding programs are discussed. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/528175/1/document_528175.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1007/s10709-004-7319-z 10.1007/s10709-004-7319-z info:eu-repo/semantics/altIdentifier/doi/10.1007/s10709-004-7319-z info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1007/s10709-004-7319-z
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Musa
Musa acuminata
Musa balbisiana
biodiversité
germoplasme
marqueur génétique
microsatellite
polymorphisme génétique
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4995
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3249
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24031
F30 - Génétique et amélioration des plantes
Musa
Musa acuminata
Musa balbisiana
biodiversité
germoplasme
marqueur génétique
microsatellite
polymorphisme génétique
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4995
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3249
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24031
spellingShingle F30 - Génétique et amélioration des plantes
Musa
Musa acuminata
Musa balbisiana
biodiversité
germoplasme
marqueur génétique
microsatellite
polymorphisme génétique
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4995
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3249
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24031
F30 - Génétique et amélioration des plantes
Musa
Musa acuminata
Musa balbisiana
biodiversité
germoplasme
marqueur génétique
microsatellite
polymorphisme génétique
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4995
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3249
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24031
Noyer, Jean-Louis
Causse, Sandrine
Tomekpé, Kodjo
Bouet, André
Baurens, Franc-Christophe
A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
description Using both SSR and AFLP markers, the genetic diversity of 30 plantains constituting a representative sample of the phenotypic diversity was assessed. The results confirmed a very narrow genetic base of this cultivar group. SSR and AFLP data support the hypothesis that these cultivars may have arisen from vegetative multiplication of a single seed. MSAP were used to survey cytosine methylation status at CCGG sites in order to obtain an alternative source of diversity data. A higher degree of polymorphism was revealed allowing the classification of the samples into three clusters. No correlation was observed between the phenotypic classification and methylation diversity. Implications for breeding programs are discussed.
format article
topic_facet F30 - Génétique et amélioration des plantes
Musa
Musa acuminata
Musa balbisiana
biodiversité
germoplasme
marqueur génétique
microsatellite
polymorphisme génétique
http://aims.fao.org/aos/agrovoc/c_4993
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_4995
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3249
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24031
author Noyer, Jean-Louis
Causse, Sandrine
Tomekpé, Kodjo
Bouet, André
Baurens, Franc-Christophe
author_facet Noyer, Jean-Louis
Causse, Sandrine
Tomekpé, Kodjo
Bouet, André
Baurens, Franc-Christophe
author_sort Noyer, Jean-Louis
title A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
title_short A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
title_full A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
title_fullStr A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
title_full_unstemmed A new image of plantain diversity assessed by SSR, AFLP and MSAP markers
title_sort new image of plantain diversity assessed by ssr, aflp and msap markers
url http://agritrop.cirad.fr/528175/
http://agritrop.cirad.fr/528175/1/document_528175.pdf
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