Marker-aided selection of QTLs for drought tolerance in rice

Drought is an increasingly important constraint limiting rice world production. Drought tolerance, however, is a complex character resulting from many interacting component traits that QTL mapping studies have shown to be quantitative. To demonstrate the efficiency of marker-aided selection (MAS) to manipulate QTLs, two examples of selection based on markers only are described. The first study aimed at introgressing alleles for root depth. QTL detection had already been conducted in the appropriate background and the MAS step was therefore implemented directly. The interesting alleles were coming from Azucena, a deep-rooted variety, and IR64, the target for introgression, was used as the recurrent parent in 3 cycles of marker-assisted backcrosses. Several QTLs were manipulated at once. BC3F2 progenies were genotyped to select plants with Azucena alleles at the QTLs and assess the return to the recurrent parent. The phenotypic evaluation of BC3F3 families showed that the introgressed QTLs were expressed in the recipient background. It also highlighted the importance of the initial QTL analysis methods. In standard breeding programs, however, specific QTL detection results are seldom available. The advanced backcross QTL analysis method allows the simultaneous discovery and transfer of interesting QTLs from an unadapted donor to an elite variety. We used this method to transfer QTLs for osmotic adjustment, an important component of true tolerance, from IR62266, an indica donor, to IR60080-46A, a japonica elite line. BC3F3 plants were produced and QTL analysis of osmotic adjustment was conducted to determine the best plants to cross to construct improved near-isogenic lines. (Texte intégral)

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Main Authors: Courtois, Brigitte, Lafitte, Renée Honor, McNally, K., Pathan, M.S., Robin, Sabariappan, Shen, Lishuang, Nguyen, Henry T., Li, Zhi-Kang
Format: conference_item biblioteca
Language:eng
Published: Scherago International
Subjects:F30 - Génétique et amélioration des plantes, Oryza, résistance à la sécheresse, sélection, technique analytique, http://aims.fao.org/aos/agrovoc/c_5435, http://aims.fao.org/aos/agrovoc/c_2392, http://aims.fao.org/aos/agrovoc/c_6951, http://aims.fao.org/aos/agrovoc/c_1513,
Online Access:http://agritrop.cirad.fr/487400/
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spelling dig-cirad-fr-4874002024-01-28T10:05:14Z http://agritrop.cirad.fr/487400/ http://agritrop.cirad.fr/487400/ Marker-aided selection of QTLs for drought tolerance in rice. Courtois Brigitte, Lafitte Renée Honor, McNally K., Pathan M.S., Robin Sabariappan, Shen Lishuang, Nguyen Henry T., Li Zhi-Kang. 2002. In : Plant, Animal and Microbe Genomes 10th Conference. Abstracts. New York : Scherago International Plant, Animal and Microbe Genomes Conference. 10, San Diego, États-Unis, 12 Janvier 2002/16 Janvier 2002.http://www.intl-pag.org/pag/10/abstracts/PAGX_W225.html <http://www.intl-pag.org/pag/10/abstracts/PAGX_W225.html> Marker-aided selection of QTLs for drought tolerance in rice Courtois, Brigitte Lafitte, Renée Honor McNally, K. Pathan, M.S. Robin, Sabariappan Shen, Lishuang Nguyen, Henry T. Li, Zhi-Kang eng 2002 Scherago International Plant, Animal and Microbe Genomes 10th Conference. Abstracts F30 - Génétique et amélioration des plantes Oryza résistance à la sécheresse sélection technique analytique http://aims.fao.org/aos/agrovoc/c_5435 http://aims.fao.org/aos/agrovoc/c_2392 http://aims.fao.org/aos/agrovoc/c_6951 http://aims.fao.org/aos/agrovoc/c_1513 Drought is an increasingly important constraint limiting rice world production. Drought tolerance, however, is a complex character resulting from many interacting component traits that QTL mapping studies have shown to be quantitative. To demonstrate the efficiency of marker-aided selection (MAS) to manipulate QTLs, two examples of selection based on markers only are described. The first study aimed at introgressing alleles for root depth. QTL detection had already been conducted in the appropriate background and the MAS step was therefore implemented directly. The interesting alleles were coming from Azucena, a deep-rooted variety, and IR64, the target for introgression, was used as the recurrent parent in 3 cycles of marker-assisted backcrosses. Several QTLs were manipulated at once. BC3F2 progenies were genotyped to select plants with Azucena alleles at the QTLs and assess the return to the recurrent parent. The phenotypic evaluation of BC3F3 families showed that the introgressed QTLs were expressed in the recipient background. It also highlighted the importance of the initial QTL analysis methods. In standard breeding programs, however, specific QTL detection results are seldom available. The advanced backcross QTL analysis method allows the simultaneous discovery and transfer of interesting QTLs from an unadapted donor to an elite variety. We used this method to transfer QTLs for osmotic adjustment, an important component of true tolerance, from IR62266, an indica donor, to IR60080-46A, a japonica elite line. BC3F3 plants were produced and QTL analysis of osmotic adjustment was conducted to determine the best plants to cross to construct improved near-isogenic lines. (Texte intégral) conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/closedAccess http://www.intl-pag.org/pag/10/abstracts/PAGX_W225.html http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=170987 info:eu-repo/semantics/altIdentifier/purl/http://www.intl-pag.org/pag/10/abstracts/PAGX_W225.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Oryza
résistance à la sécheresse
sélection
technique analytique
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_2392
http://aims.fao.org/aos/agrovoc/c_6951
http://aims.fao.org/aos/agrovoc/c_1513
F30 - Génétique et amélioration des plantes
Oryza
résistance à la sécheresse
sélection
technique analytique
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_2392
http://aims.fao.org/aos/agrovoc/c_6951
http://aims.fao.org/aos/agrovoc/c_1513
spellingShingle F30 - Génétique et amélioration des plantes
Oryza
résistance à la sécheresse
sélection
technique analytique
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_2392
http://aims.fao.org/aos/agrovoc/c_6951
http://aims.fao.org/aos/agrovoc/c_1513
F30 - Génétique et amélioration des plantes
Oryza
résistance à la sécheresse
sélection
technique analytique
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_2392
http://aims.fao.org/aos/agrovoc/c_6951
http://aims.fao.org/aos/agrovoc/c_1513
Courtois, Brigitte
Lafitte, Renée Honor
McNally, K.
Pathan, M.S.
Robin, Sabariappan
Shen, Lishuang
Nguyen, Henry T.
Li, Zhi-Kang
Marker-aided selection of QTLs for drought tolerance in rice
description Drought is an increasingly important constraint limiting rice world production. Drought tolerance, however, is a complex character resulting from many interacting component traits that QTL mapping studies have shown to be quantitative. To demonstrate the efficiency of marker-aided selection (MAS) to manipulate QTLs, two examples of selection based on markers only are described. The first study aimed at introgressing alleles for root depth. QTL detection had already been conducted in the appropriate background and the MAS step was therefore implemented directly. The interesting alleles were coming from Azucena, a deep-rooted variety, and IR64, the target for introgression, was used as the recurrent parent in 3 cycles of marker-assisted backcrosses. Several QTLs were manipulated at once. BC3F2 progenies were genotyped to select plants with Azucena alleles at the QTLs and assess the return to the recurrent parent. The phenotypic evaluation of BC3F3 families showed that the introgressed QTLs were expressed in the recipient background. It also highlighted the importance of the initial QTL analysis methods. In standard breeding programs, however, specific QTL detection results are seldom available. The advanced backcross QTL analysis method allows the simultaneous discovery and transfer of interesting QTLs from an unadapted donor to an elite variety. We used this method to transfer QTLs for osmotic adjustment, an important component of true tolerance, from IR62266, an indica donor, to IR60080-46A, a japonica elite line. BC3F3 plants were produced and QTL analysis of osmotic adjustment was conducted to determine the best plants to cross to construct improved near-isogenic lines. (Texte intégral)
format conference_item
topic_facet F30 - Génétique et amélioration des plantes
Oryza
résistance à la sécheresse
sélection
technique analytique
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_2392
http://aims.fao.org/aos/agrovoc/c_6951
http://aims.fao.org/aos/agrovoc/c_1513
author Courtois, Brigitte
Lafitte, Renée Honor
McNally, K.
Pathan, M.S.
Robin, Sabariappan
Shen, Lishuang
Nguyen, Henry T.
Li, Zhi-Kang
author_facet Courtois, Brigitte
Lafitte, Renée Honor
McNally, K.
Pathan, M.S.
Robin, Sabariappan
Shen, Lishuang
Nguyen, Henry T.
Li, Zhi-Kang
author_sort Courtois, Brigitte
title Marker-aided selection of QTLs for drought tolerance in rice
title_short Marker-aided selection of QTLs for drought tolerance in rice
title_full Marker-aided selection of QTLs for drought tolerance in rice
title_fullStr Marker-aided selection of QTLs for drought tolerance in rice
title_full_unstemmed Marker-aided selection of QTLs for drought tolerance in rice
title_sort marker-aided selection of qtls for drought tolerance in rice
publisher Scherago International
url http://agritrop.cirad.fr/487400/
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