Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif
The nucleic acid sequences of rDNA ITS1 and the rDNA D2/D3 expansion segment were compared for 57 burrowing nematode isolates collected from Australia, Cameroon, Central America, Cuba, Dominican Republic, Florida, Guadeloupe, Hawaii, Nigeria, Honduras, Indonesia, Ivory Coast, Puerto Rico, South Africa, and Uganda. Of the 57 isolates, 55 were morphologically. similar to #Radopholus similis# and seven were citrus-parasitic. The nucleic acid sequences for PCR-amplified ITS1 and for the D2/D3 expansion segment of the 28S rDNA gene were each identical for all putative #R similis#. Sequence divergence for both the ITS1 and the D2/D3 was concordant with morphological differences that distinguish #R. similis# from other burrowing nematode species. This result substantiates previous observations that the #R. similis# genome is highly conserved across geographic regions. Autapomorphies that would delimit phylogenetic lineages of non-citrus-parasitic #R. similis# from those that parasitize citrus were not observed. The data presented herein support the concept that #R. similis# is comprised of two pathotypes-one that parasitizes citrus and one that does not. (Author's abstract)
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Subjects: | H10 - Ravageurs des plantes, Radopholus similis, phylogénie, adn, ribosome, évolution, espèce, taxonomie, Musa, Citrus, adn ribosomal, http://aims.fao.org/aos/agrovoc/c_24799, http://aims.fao.org/aos/agrovoc/c_13325, http://aims.fao.org/aos/agrovoc/c_2347, http://aims.fao.org/aos/agrovoc/c_6597, http://aims.fao.org/aos/agrovoc/c_2745, http://aims.fao.org/aos/agrovoc/c_7280, http://aims.fao.org/aos/agrovoc/c_7631, http://aims.fao.org/aos/agrovoc/c_4993, http://aims.fao.org/aos/agrovoc/c_1637, http://aims.fao.org/aos/agrovoc/c_1354098656894, |
Online Access: | http://agritrop.cirad.fr/475619/ http://agritrop.cirad.fr/475619/1/67137-67221-1-PB.pdf |
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dig-cirad-fr-4756192024-01-28T08:21:33Z http://agritrop.cirad.fr/475619/ http://agritrop.cirad.fr/475619/ Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif. Kaplan D.T., Thomas W.K., Frisse L.M., Sarah Jean-Louis, Stanton J.M., Speijer P.R., Marin D.H., Opperman C.H.. 2000. Journal of Nematology, 32 (2) : 134-142.http://journals.fcla.edu/jon/article/view/67137 <http://journals.fcla.edu/jon/article/view/67137> Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif Kaplan, D.T. Thomas, W.K. Frisse, L.M. Sarah, Jean-Louis Stanton, J.M. Speijer, P.R. Marin, D.H. Opperman, C.H. eng 2000 Journal of Nematology H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 The nucleic acid sequences of rDNA ITS1 and the rDNA D2/D3 expansion segment were compared for 57 burrowing nematode isolates collected from Australia, Cameroon, Central America, Cuba, Dominican Republic, Florida, Guadeloupe, Hawaii, Nigeria, Honduras, Indonesia, Ivory Coast, Puerto Rico, South Africa, and Uganda. Of the 57 isolates, 55 were morphologically. similar to #Radopholus similis# and seven were citrus-parasitic. The nucleic acid sequences for PCR-amplified ITS1 and for the D2/D3 expansion segment of the 28S rDNA gene were each identical for all putative #R similis#. Sequence divergence for both the ITS1 and the D2/D3 was concordant with morphological differences that distinguish #R. similis# from other burrowing nematode species. This result substantiates previous observations that the #R. similis# genome is highly conserved across geographic regions. Autapomorphies that would delimit phylogenetic lineages of non-citrus-parasitic #R. similis# from those that parasitize citrus were not observed. The data presented herein support the concept that #R. similis# is comprised of two pathotypes-one that parasitizes citrus and one that does not. (Author's abstract) article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/475619/1/67137-67221-1-PB.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html http://journals.fcla.edu/jon/article/view/67137 info:eu-repo/semantics/altIdentifier/purl/http://journals.fcla.edu/jon/article/view/67137 |
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H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 |
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H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 Kaplan, D.T. Thomas, W.K. Frisse, L.M. Sarah, Jean-Louis Stanton, J.M. Speijer, P.R. Marin, D.H. Opperman, C.H. Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
description |
The nucleic acid sequences of rDNA ITS1 and the rDNA D2/D3 expansion segment were compared for 57 burrowing nematode isolates collected from Australia, Cameroon, Central America, Cuba, Dominican Republic, Florida, Guadeloupe, Hawaii, Nigeria, Honduras, Indonesia, Ivory Coast, Puerto Rico, South Africa, and Uganda. Of the 57 isolates, 55 were morphologically. similar to #Radopholus similis# and seven were citrus-parasitic. The nucleic acid sequences for PCR-amplified ITS1 and for the D2/D3 expansion segment of the 28S rDNA gene were each identical for all putative #R similis#. Sequence divergence for both the ITS1 and the D2/D3 was concordant with morphological differences that distinguish #R. similis# from other burrowing nematode species. This result substantiates previous observations that the #R. similis# genome is highly conserved across geographic regions. Autapomorphies that would delimit phylogenetic lineages of non-citrus-parasitic #R. similis# from those that parasitize citrus were not observed. The data presented herein support the concept that #R. similis# is comprised of two pathotypes-one that parasitizes citrus and one that does not. (Author's abstract) |
format |
article |
topic_facet |
H10 - Ravageurs des plantes Radopholus similis phylogénie adn ribosome évolution espèce taxonomie Musa Citrus adn ribosomal http://aims.fao.org/aos/agrovoc/c_24799 http://aims.fao.org/aos/agrovoc/c_13325 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_6597 http://aims.fao.org/aos/agrovoc/c_2745 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_4993 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_1354098656894 |
author |
Kaplan, D.T. Thomas, W.K. Frisse, L.M. Sarah, Jean-Louis Stanton, J.M. Speijer, P.R. Marin, D.H. Opperman, C.H. |
author_facet |
Kaplan, D.T. Thomas, W.K. Frisse, L.M. Sarah, Jean-Louis Stanton, J.M. Speijer, P.R. Marin, D.H. Opperman, C.H. |
author_sort |
Kaplan, D.T. |
title |
Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
title_short |
Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
title_full |
Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
title_fullStr |
Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
title_full_unstemmed |
Phylogenetic analysis of geographically diverse Radopholus similis via rDNA sequence reveals a monomorphic motif |
title_sort |
phylogenetic analysis of geographically diverse radopholus similis via rdna sequence reveals a monomorphic motif |
url |
http://agritrop.cirad.fr/475619/ http://agritrop.cirad.fr/475619/1/67137-67221-1-PB.pdf |
work_keys_str_mv |
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_version_ |
1792494681409454080 |