High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers
Microsatellite markers were used to assess genetic diversity of Mycosphaerella graminicola at a micro geographical scale in Tunisia. Forty five (45) isolates were sampled and assessed using seven pairs of single-locus microsatellite primers not previously tested on populations of M. graminicola in Tunisia. Genetic diversity of the field population ranged from 0.403 to 0.555 with an average of 0.484. A high level of genetic diversity was found at a sharp scale throughout the pathogen population tested. Among 45 isolates sampled, 39 different multi locus genotypes (MLG) were identified. Cluster analysis (UPGMA) showed that 86% of the isolates tested were distinct. The high degree of DNA polymorphism, the large number of different molecular genotypes and the pattern of cluster analysis suggest that sexual ascospores and/or asexual spores of a highly mutable local population could have contributed to the genetic diversity of M. graminicola in Tunisia.
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2013
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Subjects: | AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Micro Geographical Scale, HARD WHEAT, GENETIC VARIATION, MICROSATELLITES, MYCOSPHAERELLA GRAMINICOLA, |
Online Access: | http://hdl.handle.net/10883/3304 |
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dig-cimmyt-10883-33042023-10-27T15:00:59Z High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers Berraies, S. Gharbi, M.S. Belzile, F. Yahyaoui, A.H. Hajlaoui, M.R. Trifi, M. Jean, M. Rezgui, S. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA Microsatellite markers were used to assess genetic diversity of Mycosphaerella graminicola at a micro geographical scale in Tunisia. Forty five (45) isolates were sampled and assessed using seven pairs of single-locus microsatellite primers not previously tested on populations of M. graminicola in Tunisia. Genetic diversity of the field population ranged from 0.403 to 0.555 with an average of 0.484. A high level of genetic diversity was found at a sharp scale throughout the pathogen population tested. Among 45 isolates sampled, 39 different multi locus genotypes (MLG) were identified. Cluster analysis (UPGMA) showed that 86% of the isolates tested were distinct. The high degree of DNA polymorphism, the large number of different molecular genotypes and the pattern of cluster analysis suggest that sexual ascospores and/or asexual spores of a highly mutable local population could have contributed to the genetic diversity of M. graminicola in Tunisia. 1344-1349 2013-11-25T02:37:42Z 2013-11-25T02:37:42Z 2013 Article 1684-5315 http://hdl.handle.net/10883/3304 10.5897/AJB12.2299 English CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose. Open Access PDF Academic Journals https://academicjournals.org/journal/AJB/article-abstract/90F4A3340405 12 12 African Journal of Biotechnology |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA Berraies, S. Gharbi, M.S. Belzile, F. Yahyaoui, A.H. Hajlaoui, M.R. Trifi, M. Jean, M. Rezgui, S. High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
description |
Microsatellite markers were used to assess genetic diversity of Mycosphaerella graminicola at a micro geographical scale in Tunisia. Forty five (45) isolates were sampled and assessed using seven pairs of single-locus microsatellite primers not previously tested on populations of M. graminicola in Tunisia. Genetic diversity of the field population ranged from 0.403 to 0.555 with an average of 0.484. A high level of genetic diversity was found at a sharp scale throughout the pathogen population tested. Among 45 isolates sampled, 39 different multi locus genotypes (MLG) were identified. Cluster analysis (UPGMA) showed that 86% of the isolates tested were distinct. The high degree of DNA polymorphism, the large number of different molecular genotypes and the pattern of cluster analysis suggest that sexual ascospores and/or asexual spores of a highly mutable local population could have contributed to the genetic diversity of M. graminicola in Tunisia. |
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Article |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Micro Geographical Scale HARD WHEAT GENETIC VARIATION MICROSATELLITES MYCOSPHAERELLA GRAMINICOLA |
author |
Berraies, S. Gharbi, M.S. Belzile, F. Yahyaoui, A.H. Hajlaoui, M.R. Trifi, M. Jean, M. Rezgui, S. |
author_facet |
Berraies, S. Gharbi, M.S. Belzile, F. Yahyaoui, A.H. Hajlaoui, M.R. Trifi, M. Jean, M. Rezgui, S. |
author_sort |
Berraies, S. |
title |
High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
title_short |
High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
title_full |
High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
title_fullStr |
High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
title_full_unstemmed |
High genetic diversity of Mycospaherella graminicola (Zymoseptoria tritici) from a single wheat field in Tunisia as revealed by SSR markers |
title_sort |
high genetic diversity of mycospaherella graminicola (zymoseptoria tritici) from a single wheat field in tunisia as revealed by ssr markers |
publisher |
Academic Journals |
publishDate |
2013 |
url |
http://hdl.handle.net/10883/3304 |
work_keys_str_mv |
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