Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3

The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors.

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Bibliographic Details
Main Authors: Sudhir Navathe, Xinyao He, Kamble, U., Kumar, M., Patial, M., Singh, G., Singh, G.P., Joshi, A.K., Singh, P.K.
Format: Article biblioteca
Language:English
Published: Frontiers Media S.A. 2023
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Parastagonospora nodorum, Quantitative Inheritance, Recessive Alleles, FUNGAL DISEASES, PYRENOPHORA TRITICI-REPENTIS, TRITICUM AESTIVUM, LEPTOSPHAERIA NODORUM, Wheat,
Online Access:https://hdl.handle.net/10883/22739
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spelling dig-cimmyt-10883-227392024-03-19T15:41:48Z Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 Sudhir Navathe Xinyao He Kamble, U. Kumar, M. Patial, M. Singh, G. Singh, G.P. Joshi, A.K. Singh, P.K. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors. 2023-11-08T01:20:16Z 2023-11-08T01:20:16Z 2023 Article Published Version https://hdl.handle.net/10883/22739 10.3389/fpls.2023.1223959 English https://hdl.handle.net/11529/10548934 Climate adaptation & mitigation Nutrition, health & food security Poverty reduction, livelihoods & jobs Accelerated Breeding Plant Health Genetic Innovation Resilient Agrifood Systems Indian Council of Agricultural Research (ICAR) Bill & Melinda Gates Foundation (BMGF) United States Agency for International Development (USAID) https://hdl.handle.net/10568/137928 CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose Open Access Switzerland Frontiers Media S.A. 14 1664-462X Frontiers in Plant Science 1223959
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Parastagonospora nodorum
Quantitative Inheritance
Recessive Alleles
FUNGAL DISEASES
PYRENOPHORA TRITICI-REPENTIS
TRITICUM AESTIVUM
LEPTOSPHAERIA NODORUM
Wheat
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Parastagonospora nodorum
Quantitative Inheritance
Recessive Alleles
FUNGAL DISEASES
PYRENOPHORA TRITICI-REPENTIS
TRITICUM AESTIVUM
LEPTOSPHAERIA NODORUM
Wheat
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Parastagonospora nodorum
Quantitative Inheritance
Recessive Alleles
FUNGAL DISEASES
PYRENOPHORA TRITICI-REPENTIS
TRITICUM AESTIVUM
LEPTOSPHAERIA NODORUM
Wheat
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Parastagonospora nodorum
Quantitative Inheritance
Recessive Alleles
FUNGAL DISEASES
PYRENOPHORA TRITICI-REPENTIS
TRITICUM AESTIVUM
LEPTOSPHAERIA NODORUM
Wheat
Sudhir Navathe
Xinyao He
Kamble, U.
Kumar, M.
Patial, M.
Singh, G.
Singh, G.P.
Joshi, A.K.
Singh, P.K.
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
description The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Parastagonospora nodorum
Quantitative Inheritance
Recessive Alleles
FUNGAL DISEASES
PYRENOPHORA TRITICI-REPENTIS
TRITICUM AESTIVUM
LEPTOSPHAERIA NODORUM
Wheat
author Sudhir Navathe
Xinyao He
Kamble, U.
Kumar, M.
Patial, M.
Singh, G.
Singh, G.P.
Joshi, A.K.
Singh, P.K.
author_facet Sudhir Navathe
Xinyao He
Kamble, U.
Kumar, M.
Patial, M.
Singh, G.
Singh, G.P.
Joshi, A.K.
Singh, P.K.
author_sort Sudhir Navathe
title Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
title_short Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
title_full Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
title_fullStr Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
title_full_unstemmed Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
title_sort assessment of indian wheat germplasm for septoria nodorum blotch and tan spot reveals new qtls conferring resistance along with recessive alleles of tsn1 and snn3
publisher Frontiers Media S.A.
publishDate 2023
url https://hdl.handle.net/10883/22739
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