Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3
The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors.
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Format: | Article biblioteca |
Language: | English |
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Frontiers Media S.A.
2023
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Subjects: | AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Parastagonospora nodorum, Quantitative Inheritance, Recessive Alleles, FUNGAL DISEASES, PYRENOPHORA TRITICI-REPENTIS, TRITICUM AESTIVUM, LEPTOSPHAERIA NODORUM, Wheat, |
Online Access: | https://hdl.handle.net/10883/22739 |
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dig-cimmyt-10883-227392024-03-19T15:41:48Z Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 Sudhir Navathe Xinyao He Kamble, U. Kumar, M. Patial, M. Singh, G. Singh, G.P. Joshi, A.K. Singh, P.K. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors. 2023-11-08T01:20:16Z 2023-11-08T01:20:16Z 2023 Article Published Version https://hdl.handle.net/10883/22739 10.3389/fpls.2023.1223959 English https://hdl.handle.net/11529/10548934 Climate adaptation & mitigation Nutrition, health & food security Poverty reduction, livelihoods & jobs Accelerated Breeding Plant Health Genetic Innovation Resilient Agrifood Systems Indian Council of Agricultural Research (ICAR) Bill & Melinda Gates Foundation (BMGF) United States Agency for International Development (USAID) https://hdl.handle.net/10568/137928 CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose Open Access Switzerland Frontiers Media S.A. 14 1664-462X Frontiers in Plant Science 1223959 |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat Sudhir Navathe Xinyao He Kamble, U. Kumar, M. Patial, M. Singh, G. Singh, G.P. Joshi, A.K. Singh, P.K. Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
description |
The leaf blight diseases, Septoria nodorum blotch (SNB), and tan spot (TS) are emerging due to changing climatic conditions in the northern parts of India. We screened 296 bread wheat cultivars released in India over the past 20 years for seedling resistance against SNB (three experiments) and TS (two experiments). According to a genome-wide association study, six QTLs on chromosome arms 1BL, 2AS, 5BL, and 6BL were particularly significant for SNB across all three years, of which Q.CIM.snb.1BL, Q.CIM.snb.2AS1, Q.CIM.snb.2AS.2, and Q.CIM.snb.6BL appeared novel. In contrast, those on 5BS and 5BL may correspond to Snn3 and Tsn1, respectively. The allelic combination of tsn1/snn3 conferred resistance to SNB, whereas that of Tsn1/Snn3 conferred high susceptibility. As for TS, Tsn1 was the only stably significant locus identified in this panel. Several varieties like PBW 771, DBW 277, and HD 3319, were identified as highly resistant to both diseases that can be used in future wheat improvement programs as resistant donors. |
format |
Article |
topic_facet |
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Parastagonospora nodorum Quantitative Inheritance Recessive Alleles FUNGAL DISEASES PYRENOPHORA TRITICI-REPENTIS TRITICUM AESTIVUM LEPTOSPHAERIA NODORUM Wheat |
author |
Sudhir Navathe Xinyao He Kamble, U. Kumar, M. Patial, M. Singh, G. Singh, G.P. Joshi, A.K. Singh, P.K. |
author_facet |
Sudhir Navathe Xinyao He Kamble, U. Kumar, M. Patial, M. Singh, G. Singh, G.P. Joshi, A.K. Singh, P.K. |
author_sort |
Sudhir Navathe |
title |
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
title_short |
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
title_full |
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
title_fullStr |
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
title_full_unstemmed |
Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles of Tsn1 and Snn3 |
title_sort |
assessment of indian wheat germplasm for septoria nodorum blotch and tan spot reveals new qtls conferring resistance along with recessive alleles of tsn1 and snn3 |
publisher |
Frontiers Media S.A. |
publishDate |
2023 |
url |
https://hdl.handle.net/10883/22739 |
work_keys_str_mv |
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