QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population

Wheat blast (WB) is a devastating disease in South America, and it recently also emerged in Bangladesh. Host resistance to WB has relied heavily on the 2NS/2AS translocation, but the responsible QTL has not been mapped and its phenotypic effects in different environments have not been reported. In the current study, a recombinant inbred line population with 298 progenies was generated, with the female and male parents being Caninde#1 (with 2NS) and Alondra (without 2NS), respectively. Phenotyping was carried out in two locations in Bolivia, namely Quirusillas and Okinawa, and one location in Bangladesh, Jashore, with two sowing dates in each of the two cropping seasons in each location, during the years 2017–2019. Genotyping was performed with the DArTseq® technology along with five previously reported STS markers in the 2NS region. QTL mapping identified a major and consistent QTL on 2NS/2AS region, explaining between 22.4 and 50.1% of the phenotypic variation in different environments. Additional QTL were detected on chromosomes 1AS, 2BL, 3AL, 4BS, 4DL and 7BS, all additive to the 2NS QTL and showing phenotypic effects less than 10%. Two codominant STS markers, WGGB156 and WGGB159, were linked proximally to the 2NS/2AS QTL with a genetic distance of 0.9 cM, being potentially useful in marker-assisted selection.

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Main Authors: Xinyao He, Kabir, M.R., Roy, K.K., Anwar, M.B., Kaijie Xu, Marza, F., Odilbekov, F., Chawade, A., Duveiller, E., Huttner, E., Singh, P.K.
Format: Article biblioteca
Language:English
Published: Springer 2020
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, QUANTITATIVE TRAIT LOCI, BLASTS (OF PLANTS), DISEASE RESISTANCE, GENETIC RESISTANCE, GENETIC MARKERS,
Online Access:https://hdl.handle.net/10883/21037
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spelling dig-cimmyt-10883-210372021-02-09T18:25:15Z QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population Xinyao He Kabir, M.R. Roy, K.K. Anwar, M.B. Kaijie Xu Marza, F. Odilbekov, F. Chawade, A. Duveiller, E. Huttner, E. Singh, P.K. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY QUANTITATIVE TRAIT LOCI BLASTS (OF PLANTS) DISEASE RESISTANCE GENETIC RESISTANCE GENETIC MARKERS Wheat blast (WB) is a devastating disease in South America, and it recently also emerged in Bangladesh. Host resistance to WB has relied heavily on the 2NS/2AS translocation, but the responsible QTL has not been mapped and its phenotypic effects in different environments have not been reported. In the current study, a recombinant inbred line population with 298 progenies was generated, with the female and male parents being Caninde#1 (with 2NS) and Alondra (without 2NS), respectively. Phenotyping was carried out in two locations in Bolivia, namely Quirusillas and Okinawa, and one location in Bangladesh, Jashore, with two sowing dates in each of the two cropping seasons in each location, during the years 2017–2019. Genotyping was performed with the DArTseq® technology along with five previously reported STS markers in the 2NS region. QTL mapping identified a major and consistent QTL on 2NS/2AS region, explaining between 22.4 and 50.1% of the phenotypic variation in different environments. Additional QTL were detected on chromosomes 1AS, 2BL, 3AL, 4BS, 4DL and 7BS, all additive to the 2NS QTL and showing phenotypic effects less than 10%. Two codominant STS markers, WGGB156 and WGGB159, were linked proximally to the 2NS/2AS QTL with a genetic distance of 0.9 cM, being potentially useful in marker-assisted selection. 2673-2683 2020-11-28T01:20:17Z 2020-11-28T01:20:17Z 2020 Article Published Version https://hdl.handle.net/10883/21037 10.1007/s00122-020-03624-x English https://link.springer.com/article/10.1007%2Fs00122-020-03624-x#Sec16 CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose Open Access Berlin (Germany) Springer 9 133 0040-5752 Theoretical and Applied Genetics
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
QUANTITATIVE TRAIT LOCI
BLASTS (OF PLANTS)
DISEASE RESISTANCE
GENETIC RESISTANCE
GENETIC MARKERS
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
QUANTITATIVE TRAIT LOCI
BLASTS (OF PLANTS)
DISEASE RESISTANCE
GENETIC RESISTANCE
GENETIC MARKERS
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
QUANTITATIVE TRAIT LOCI
BLASTS (OF PLANTS)
DISEASE RESISTANCE
GENETIC RESISTANCE
GENETIC MARKERS
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
QUANTITATIVE TRAIT LOCI
BLASTS (OF PLANTS)
DISEASE RESISTANCE
GENETIC RESISTANCE
GENETIC MARKERS
Xinyao He
Kabir, M.R.
Roy, K.K.
Anwar, M.B.
Kaijie Xu
Marza, F.
Odilbekov, F.
Chawade, A.
Duveiller, E.
Huttner, E.
Singh, P.K.
QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
description Wheat blast (WB) is a devastating disease in South America, and it recently also emerged in Bangladesh. Host resistance to WB has relied heavily on the 2NS/2AS translocation, but the responsible QTL has not been mapped and its phenotypic effects in different environments have not been reported. In the current study, a recombinant inbred line population with 298 progenies was generated, with the female and male parents being Caninde#1 (with 2NS) and Alondra (without 2NS), respectively. Phenotyping was carried out in two locations in Bolivia, namely Quirusillas and Okinawa, and one location in Bangladesh, Jashore, with two sowing dates in each of the two cropping seasons in each location, during the years 2017–2019. Genotyping was performed with the DArTseq® technology along with five previously reported STS markers in the 2NS region. QTL mapping identified a major and consistent QTL on 2NS/2AS region, explaining between 22.4 and 50.1% of the phenotypic variation in different environments. Additional QTL were detected on chromosomes 1AS, 2BL, 3AL, 4BS, 4DL and 7BS, all additive to the 2NS QTL and showing phenotypic effects less than 10%. Two codominant STS markers, WGGB156 and WGGB159, were linked proximally to the 2NS/2AS QTL with a genetic distance of 0.9 cM, being potentially useful in marker-assisted selection.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
QUANTITATIVE TRAIT LOCI
BLASTS (OF PLANTS)
DISEASE RESISTANCE
GENETIC RESISTANCE
GENETIC MARKERS
author Xinyao He
Kabir, M.R.
Roy, K.K.
Anwar, M.B.
Kaijie Xu
Marza, F.
Odilbekov, F.
Chawade, A.
Duveiller, E.
Huttner, E.
Singh, P.K.
author_facet Xinyao He
Kabir, M.R.
Roy, K.K.
Anwar, M.B.
Kaijie Xu
Marza, F.
Odilbekov, F.
Chawade, A.
Duveiller, E.
Huttner, E.
Singh, P.K.
author_sort Xinyao He
title QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
title_short QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
title_full QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
title_fullStr QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
title_full_unstemmed QTL mapping for field resistance to wheat blast in the Caninde#1/Alondra population
title_sort qtl mapping for field resistance to wheat blast in the caninde#1/alondra population
publisher Springer
publishDate 2020
url https://hdl.handle.net/10883/21037
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