Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques

Maize is the most cultivated cereal in Africa in terms of land area and production, but low soil nitrogen availability often constrains yields. Developing new maize varieties with high and reliable yields using traditional crop breeding techniques in field conditions can be slow and costly. Remote sensing has become an important tool in the modernization of field-based high-throughput plant phenotyping (HTPP), providing faster gains towards the improvement of yield potential and adaptation to abiotic and biotic limiting conditions. We evaluated the performance of a set of remote sensing indices derived from red–green–blue (RGB) images along with field-based multispectral normalized difference vegetation index (NDVI) and leaf chlorophyll content (SPAD values) as phenotypic traits for assessing maize performance under managed low-nitrogen conditions. HTPP measurements were conducted from the ground and from an unmanned aerial vehicle (UAV). For the ground-level RGB indices, the strongest correlations to yield were observed with hue, greener green area (GGA), and a newly developed RGB HTPP index, NDLab (normalized difference Commission Internationale de I´Edairage (CIE)Lab index), while GGA and crop senescence index (CSI) correlated better with grain yield from the UAV. Regarding ground sensors, SPAD exhibited the closest correlation with grain yield, notably increasing in its correlation when measured in the vegetative stage. Additionally, we evaluated how different HTPP indices contributed to the explanation of yield in combination with agronomic data, such as anthesis silking interval (ASI), anthesis date (AD), and plant height (PH). Multivariate regression models, including RGB indices (R2 > 0.60), outperformed other models using only agronomic parameters or field sensors (R2 > 0.50), reinforcing RGB HTPP’s potential to improve yield assessments. Finally, we compared the low-N results to the same panel of 64 maize genotypes grown under optimal conditions, noting that only 11% of the total genotypes appeared in the highest yield producing quartile for both trials. Furthermore, we calculated the grain yield loss index (GYLI) for each genotype, which showed a large range of variability, suggesting that low-N performance is not necessarily exclusive of high productivity in optimal conditions.

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Main Authors: Buchaillot, M.L., Gracia-Romero, A., Vergara Diaz, O., Zaman-Allah, M., Amsal Tesfaye Tarekegne, Cairns, J.E., Prasanna, B.M., Araus, J.L., Kefauver, S.C.
Format: Article biblioteca
Language:English
Published: MDPI 2019
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Phenotyping, RGB, UAV, CIELab, MAIZE, NITROGEN, PHENOTYPES, REMOTE SENSING,
Online Access:https://hdl.handle.net/10883/20156
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spelling dig-cimmyt-10883-201562021-02-09T18:24:58Z Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques Buchaillot, M.L. Gracia-Romero, A. Vergara Diaz, O. Zaman-Allah, M. Amsal Tesfaye Tarekegne Cairns, J.E. Prasanna, B.M. Araus, J.L. Kefauver, S.C. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Phenotyping RGB UAV CIELab MAIZE NITROGEN PHENOTYPES REMOTE SENSING Maize is the most cultivated cereal in Africa in terms of land area and production, but low soil nitrogen availability often constrains yields. Developing new maize varieties with high and reliable yields using traditional crop breeding techniques in field conditions can be slow and costly. Remote sensing has become an important tool in the modernization of field-based high-throughput plant phenotyping (HTPP), providing faster gains towards the improvement of yield potential and adaptation to abiotic and biotic limiting conditions. We evaluated the performance of a set of remote sensing indices derived from red–green–blue (RGB) images along with field-based multispectral normalized difference vegetation index (NDVI) and leaf chlorophyll content (SPAD values) as phenotypic traits for assessing maize performance under managed low-nitrogen conditions. HTPP measurements were conducted from the ground and from an unmanned aerial vehicle (UAV). For the ground-level RGB indices, the strongest correlations to yield were observed with hue, greener green area (GGA), and a newly developed RGB HTPP index, NDLab (normalized difference Commission Internationale de I´Edairage (CIE)Lab index), while GGA and crop senescence index (CSI) correlated better with grain yield from the UAV. Regarding ground sensors, SPAD exhibited the closest correlation with grain yield, notably increasing in its correlation when measured in the vegetative stage. Additionally, we evaluated how different HTPP indices contributed to the explanation of yield in combination with agronomic data, such as anthesis silking interval (ASI), anthesis date (AD), and plant height (PH). Multivariate regression models, including RGB indices (R2 > 0.60), outperformed other models using only agronomic parameters or field sensors (R2 > 0.50), reinforcing RGB HTPP’s potential to improve yield assessments. Finally, we compared the low-N results to the same panel of 64 maize genotypes grown under optimal conditions, noting that only 11% of the total genotypes appeared in the highest yield producing quartile for both trials. Furthermore, we calculated the grain yield loss index (GYLI) for each genotype, which showed a large range of variability, suggesting that low-N performance is not necessarily exclusive of high productivity in optimal conditions. art. 1815 2019-06-13T15:35:57Z 2019-06-13T15:35:57Z 2019 Article Published Version 1424-8220 ISSN: 1424-8220 https://hdl.handle.net/10883/20156 10.3390/s19081815 English CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the sutable license for that purpose. Open Access PDF AFRICA Basel (Switzerland) MDPI 8 19 Sensors
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Phenotyping
RGB
UAV
CIELab
MAIZE
NITROGEN
PHENOTYPES
REMOTE SENSING
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Phenotyping
RGB
UAV
CIELab
MAIZE
NITROGEN
PHENOTYPES
REMOTE SENSING
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Phenotyping
RGB
UAV
CIELab
MAIZE
NITROGEN
PHENOTYPES
REMOTE SENSING
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Phenotyping
RGB
UAV
CIELab
MAIZE
NITROGEN
PHENOTYPES
REMOTE SENSING
Buchaillot, M.L.
Gracia-Romero, A.
Vergara Diaz, O.
Zaman-Allah, M.
Amsal Tesfaye Tarekegne
Cairns, J.E.
Prasanna, B.M.
Araus, J.L.
Kefauver, S.C.
Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
description Maize is the most cultivated cereal in Africa in terms of land area and production, but low soil nitrogen availability often constrains yields. Developing new maize varieties with high and reliable yields using traditional crop breeding techniques in field conditions can be slow and costly. Remote sensing has become an important tool in the modernization of field-based high-throughput plant phenotyping (HTPP), providing faster gains towards the improvement of yield potential and adaptation to abiotic and biotic limiting conditions. We evaluated the performance of a set of remote sensing indices derived from red–green–blue (RGB) images along with field-based multispectral normalized difference vegetation index (NDVI) and leaf chlorophyll content (SPAD values) as phenotypic traits for assessing maize performance under managed low-nitrogen conditions. HTPP measurements were conducted from the ground and from an unmanned aerial vehicle (UAV). For the ground-level RGB indices, the strongest correlations to yield were observed with hue, greener green area (GGA), and a newly developed RGB HTPP index, NDLab (normalized difference Commission Internationale de I´Edairage (CIE)Lab index), while GGA and crop senescence index (CSI) correlated better with grain yield from the UAV. Regarding ground sensors, SPAD exhibited the closest correlation with grain yield, notably increasing in its correlation when measured in the vegetative stage. Additionally, we evaluated how different HTPP indices contributed to the explanation of yield in combination with agronomic data, such as anthesis silking interval (ASI), anthesis date (AD), and plant height (PH). Multivariate regression models, including RGB indices (R2 > 0.60), outperformed other models using only agronomic parameters or field sensors (R2 > 0.50), reinforcing RGB HTPP’s potential to improve yield assessments. Finally, we compared the low-N results to the same panel of 64 maize genotypes grown under optimal conditions, noting that only 11% of the total genotypes appeared in the highest yield producing quartile for both trials. Furthermore, we calculated the grain yield loss index (GYLI) for each genotype, which showed a large range of variability, suggesting that low-N performance is not necessarily exclusive of high productivity in optimal conditions.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Phenotyping
RGB
UAV
CIELab
MAIZE
NITROGEN
PHENOTYPES
REMOTE SENSING
author Buchaillot, M.L.
Gracia-Romero, A.
Vergara Diaz, O.
Zaman-Allah, M.
Amsal Tesfaye Tarekegne
Cairns, J.E.
Prasanna, B.M.
Araus, J.L.
Kefauver, S.C.
author_facet Buchaillot, M.L.
Gracia-Romero, A.
Vergara Diaz, O.
Zaman-Allah, M.
Amsal Tesfaye Tarekegne
Cairns, J.E.
Prasanna, B.M.
Araus, J.L.
Kefauver, S.C.
author_sort Buchaillot, M.L.
title Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
title_short Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
title_full Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
title_fullStr Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
title_full_unstemmed Evaluating maize genotype performance under low nitrogen conditions using RGB UAV phenotyping techniques
title_sort evaluating maize genotype performance under low nitrogen conditions using rgb uav phenotyping techniques
publisher MDPI
publishDate 2019
url https://hdl.handle.net/10883/20156
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