Opposing phylogenetic diversity gradients of plant and soil bacterial communities

Plants and soil microbes show parallel patterns of species-level diversity. Diverse plant communities release a wider range of organics that are consumed by more microbial species. We speculated, however, that diversity metrics accounting for the evolutionary distance across community members would reveal opposing patterns between plant and soil bacterial phylogenetic diversity. Plant phylogenetic diversity enhances plant productivity and thus expectedly soil fertility. This, in turn, might reduce bacterial phylogenetic diversity by favouring one (or a few) competitive bacterial clade. We collected topsoils in 15 semi-arid plant patches and adjacent low-cover areas configuring a plant phylodiversity gradient, pyrosequenced the 16S rRNA gene to identify bacterial taxa and analysed soil fertility parameters. Structural equation modelling showed positive effects of both plant richness and phylogenetic diversity on soil fertility. Fertility increased bacterial richness but reduced bacterial phylogenetic diversity. This might be attributed to the competitive dominance of a lineage based on its high relative fitness. This suggests biotic interactions as determinants of the soil bacterial community assembly, while emphasizing the need to use phylogeny-informed metrics to tease apart the processes underlying the patterns of diversity.

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Bibliographic Details
Main Authors: Goberna, M., Navarro-Cano, J. A., Verdú, Miguel
Other Authors: Ministerio de Economía y Competitividad (España)
Format: artículo biblioteca
Language:English
Published: Royal Society (Great Britain) 2016-02-24
Subjects:Fitness differences, Community assembly, Phylogenetic diversity, Proteobacteria, Soil microbessoil fertility,
Online Access:http://hdl.handle.net/10261/183343
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/100007406
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spelling dig-cide-es-10261-1833432021-11-22T13:04:04Z Opposing phylogenetic diversity gradients of plant and soil bacterial communities Goberna, M. Navarro-Cano, J. A. Verdú, Miguel Ministerio de Economía y Competitividad (España) Fundación BBVA Verdú, Miguel [0000-0002-9778-7692] Goberna, M. [0000-0001-5303-3429] Fitness differences Community assembly Phylogenetic diversity Proteobacteria Soil microbessoil fertility Soil microbessoil fertility Plants and soil microbes show parallel patterns of species-level diversity. Diverse plant communities release a wider range of organics that are consumed by more microbial species. We speculated, however, that diversity metrics accounting for the evolutionary distance across community members would reveal opposing patterns between plant and soil bacterial phylogenetic diversity. Plant phylogenetic diversity enhances plant productivity and thus expectedly soil fertility. This, in turn, might reduce bacterial phylogenetic diversity by favouring one (or a few) competitive bacterial clade. We collected topsoils in 15 semi-arid plant patches and adjacent low-cover areas configuring a plant phylodiversity gradient, pyrosequenced the 16S rRNA gene to identify bacterial taxa and analysed soil fertility parameters. Structural equation modelling showed positive effects of both plant richness and phylogenetic diversity on soil fertility. Fertility increased bacterial richness but reduced bacterial phylogenetic diversity. This might be attributed to the competitive dominance of a lineage based on its high relative fitness. This suggests biotic interactions as determinants of the soil bacterial community assembly, while emphasizing the need to use phylogeny-informed metrics to tease apart the processes underlying the patterns of diversity. Financial support was provided by the Spanish Ministerio de Economía y Competitividad (R&D Project CGL2014-58333-P), and Fundación BBVA (project Mintegra; I Convocatoria de ayudas de la fundación BBVA a proyectos de investigació). M.G. acknowledges support by the Programa Ramón y Cajal (Ministerio de Economía y Competitividad). Peer reviewed 2019-06-05T08:03:40Z 2019-06-05T08:03:40Z 2016-02-24 artículo http://purl.org/coar/resource_type/c_6501 Proceedings of the Royal Society of London - B 283 (1825): 20153003 (2016) 0962-8452 http://hdl.handle.net/10261/183343 10.1098/rspb.2015.3003 1471-2954 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/100007406 26888037 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2014-58333-P http://dx.doi.org/10.1098/rspb.2015.3003 Sí none Royal Society (Great Britain)
institution CIDE ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-cide-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del CIDE España
language English
topic Fitness differences
Community assembly
Phylogenetic diversity
Proteobacteria
Soil microbessoil fertility
Soil microbessoil fertility
Fitness differences
Community assembly
Phylogenetic diversity
Proteobacteria
Soil microbessoil fertility
Soil microbessoil fertility
spellingShingle Fitness differences
Community assembly
Phylogenetic diversity
Proteobacteria
Soil microbessoil fertility
Soil microbessoil fertility
Fitness differences
Community assembly
Phylogenetic diversity
Proteobacteria
Soil microbessoil fertility
Soil microbessoil fertility
Goberna, M.
Navarro-Cano, J. A.
Verdú, Miguel
Opposing phylogenetic diversity gradients of plant and soil bacterial communities
description Plants and soil microbes show parallel patterns of species-level diversity. Diverse plant communities release a wider range of organics that are consumed by more microbial species. We speculated, however, that diversity metrics accounting for the evolutionary distance across community members would reveal opposing patterns between plant and soil bacterial phylogenetic diversity. Plant phylogenetic diversity enhances plant productivity and thus expectedly soil fertility. This, in turn, might reduce bacterial phylogenetic diversity by favouring one (or a few) competitive bacterial clade. We collected topsoils in 15 semi-arid plant patches and adjacent low-cover areas configuring a plant phylodiversity gradient, pyrosequenced the 16S rRNA gene to identify bacterial taxa and analysed soil fertility parameters. Structural equation modelling showed positive effects of both plant richness and phylogenetic diversity on soil fertility. Fertility increased bacterial richness but reduced bacterial phylogenetic diversity. This might be attributed to the competitive dominance of a lineage based on its high relative fitness. This suggests biotic interactions as determinants of the soil bacterial community assembly, while emphasizing the need to use phylogeny-informed metrics to tease apart the processes underlying the patterns of diversity.
author2 Ministerio de Economía y Competitividad (España)
author_facet Ministerio de Economía y Competitividad (España)
Goberna, M.
Navarro-Cano, J. A.
Verdú, Miguel
format artículo
topic_facet Fitness differences
Community assembly
Phylogenetic diversity
Proteobacteria
Soil microbessoil fertility
Soil microbessoil fertility
author Goberna, M.
Navarro-Cano, J. A.
Verdú, Miguel
author_sort Goberna, M.
title Opposing phylogenetic diversity gradients of plant and soil bacterial communities
title_short Opposing phylogenetic diversity gradients of plant and soil bacterial communities
title_full Opposing phylogenetic diversity gradients of plant and soil bacterial communities
title_fullStr Opposing phylogenetic diversity gradients of plant and soil bacterial communities
title_full_unstemmed Opposing phylogenetic diversity gradients of plant and soil bacterial communities
title_sort opposing phylogenetic diversity gradients of plant and soil bacterial communities
publisher Royal Society (Great Britain)
publishDate 2016-02-24
url http://hdl.handle.net/10261/183343
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/100007406
work_keys_str_mv AT gobernam opposingphylogeneticdiversitygradientsofplantandsoilbacterialcommunities
AT navarrocanoja opposingphylogeneticdiversitygradientsofplantandsoilbacterialcommunities
AT verdumiguel opposingphylogeneticdiversitygradientsofplantandsoilbacterialcommunities
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