CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes
RING ubiquitin E3 ligases enclose a RING domain for ubiquitin ligase activity and associated domains and/or conserved motifs outside the RING domain that collectively facilitate their classification and usually reveal some of key information related to mechanism of action. Here we describe a new family of E3 ligases that encodes a RING-H2 domain related in sequence to the ATL and BTL RING-H2 domains. This family, named CTL, encodes a motif designed as YEELL that expands 21 amino acids next to the RING-H2 domain that is present across most eukaryotic lineages. E3 ubiquitin ligase BIG BROTHER is a plant CTL that regulates organ size, and SUMO-targeted ubiquitin E3 ligase RNF111/ARKADIA is a vertebrate CTL. Basal animal and vertebrate, as well as fungi species, encode a single CTL gene that constraints the number of paralogs observed in vertebrates. Conversely, as previously described in ATL and BTL families in plants, CTL genes range from a single copy in green algae and 3 to 5 copies in basal species to 9 to 35 copies in angiosperms. Our analysis describes key structural features of a novel family of E3 ubiquitin ligases as an integral component of the set of core eukaryotic genes.
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Format: | info:eu-repo/semantics/article biblioteca |
Language: | eng |
Subjects: | info:eu-repo/classification/Autores/CTL PROTEIN, info:eu-repo/classification/Autores/PROTEIN, info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3, info:eu-repo/classification/Autores/UNCLASSIFIED DRUG, info:eu-repo/classification/Autores/ZINC FINGER PROTEIN, info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE, info:eu-repo/classification/cti/2, |
Online Access: | http://cicy.repositorioinstitucional.mx/jspui/handle/1003/1528 |
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dig-cicy-1003-15282019-05-30T21:37:07Z CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes DOMINGO JIMENEZ LOPEZ LAURA AGUILAR HENONIN JUAN MANUEL GONZALEZ PRIETO Víctor Hugo Aguilar Hernández PLINIO ANTONIO GUZMAN VILLATE 2018 info:eu-repo/semantics/article RING ubiquitin E3 ligases enclose a RING domain for ubiquitin ligase activity and associated domains and/or conserved motifs outside the RING domain that collectively facilitate their classification and usually reveal some of key information related to mechanism of action. Here we describe a new family of E3 ligases that encodes a RING-H2 domain related in sequence to the ATL and BTL RING-H2 domains. This family, named CTL, encodes a motif designed as YEELL that expands 21 amino acids next to the RING-H2 domain that is present across most eukaryotic lineages. E3 ubiquitin ligase BIG BROTHER is a plant CTL that regulates organ size, and SUMO-targeted ubiquitin E3 ligase RNF111/ARKADIA is a vertebrate CTL. Basal animal and vertebrate, as well as fungi species, encode a single CTL gene that constraints the number of paralogs observed in vertebrates. Conversely, as previously described in ATL and BTL families in plants, CTL genes range from a single copy in green algae and 3 to 5 copies in basal species to 9 to 35 copies in angiosperms. Our analysis describes key structural features of a novel family of E3 ubiquitin ligases as an integral component of the set of core eukaryotic genes. info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 PloS one, 13(1), e0190969, 2018 http://cicy.repositorioinstitucional.mx/jspui/handle/1003/1528 info:eu-repo/semantics/datasetDOI/10.1371/journal.pone.0190969 info:eu-repo/semantics/openAccess eng citation:Jiménez-López, D., Aguilar-Henonin, L., González-Prieto, J. M., Aguilar-Hernández, V., & Guzmán, P. (2018). CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the RING domain that is present across eukaryotes. PloS one, 13(1), e0190969. http://creativecommons.org/licenses/by-nc-nd/4.0 info:eu-repo/semantics/submittedVersion application/pdf |
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info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 |
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info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 DOMINGO JIMENEZ LOPEZ LAURA AGUILAR HENONIN JUAN MANUEL GONZALEZ PRIETO Víctor Hugo Aguilar Hernández PLINIO ANTONIO GUZMAN VILLATE CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
description |
RING ubiquitin E3 ligases enclose a RING domain for ubiquitin ligase activity and associated domains and/or conserved motifs outside the RING domain that collectively facilitate their classification and usually reveal some of key information related to mechanism of action. Here we describe a new family of E3 ligases that encodes a RING-H2 domain related in sequence to the ATL and BTL RING-H2 domains. This family, named CTL, encodes a motif designed as YEELL that expands 21 amino acids next to the RING-H2 domain that is present across most eukaryotic lineages. E3 ubiquitin ligase BIG BROTHER is a plant CTL that regulates organ size, and SUMO-targeted ubiquitin E3 ligase RNF111/ARKADIA is a vertebrate CTL. Basal animal and vertebrate, as well as fungi species, encode a single CTL gene that constraints the number of paralogs observed in vertebrates. Conversely, as previously described in ATL and BTL families in plants, CTL genes range from a single copy in green algae and 3 to 5 copies in basal species to 9 to 35 copies in angiosperms. Our analysis describes key structural features of a novel family of E3 ubiquitin ligases as an integral component of the set of core eukaryotic genes. |
format |
info:eu-repo/semantics/article |
topic_facet |
info:eu-repo/classification/Autores/CTL PROTEIN info:eu-repo/classification/Autores/PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE E3 info:eu-repo/classification/Autores/UNCLASSIFIED DRUG info:eu-repo/classification/Autores/ZINC FINGER PROTEIN info:eu-repo/classification/Autores/UBIQUITIN PROTEIN LIGASE info:eu-repo/classification/cti/2 info:eu-repo/classification/cti/2 |
author |
DOMINGO JIMENEZ LOPEZ LAURA AGUILAR HENONIN JUAN MANUEL GONZALEZ PRIETO Víctor Hugo Aguilar Hernández PLINIO ANTONIO GUZMAN VILLATE |
author_facet |
DOMINGO JIMENEZ LOPEZ LAURA AGUILAR HENONIN JUAN MANUEL GONZALEZ PRIETO Víctor Hugo Aguilar Hernández PLINIO ANTONIO GUZMAN VILLATE |
author_sort |
DOMINGO JIMENEZ LOPEZ |
title |
CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
title_short |
CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
title_full |
CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
title_fullStr |
CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
title_full_unstemmed |
CTLs, a new class of RING-H2 ubiquitin ligases uncovered by YEELL, a motif close to the ring domain that is present across eukaryotes |
title_sort |
ctls, a new class of ring-h2 ubiquitin ligases uncovered by yeell, a motif close to the ring domain that is present across eukaryotes |
url |
http://cicy.repositorioinstitucional.mx/jspui/handle/1003/1528 |
work_keys_str_mv |
AT domingojimenezlopez ctlsanewclassofringh2ubiquitinligasesuncoveredbyyeellamotifclosetotheringdomainthatispresentacrosseukaryotes AT lauraaguilarhenonin ctlsanewclassofringh2ubiquitinligasesuncoveredbyyeellamotifclosetotheringdomainthatispresentacrosseukaryotes AT juanmanuelgonzalezprieto ctlsanewclassofringh2ubiquitinligasesuncoveredbyyeellamotifclosetotheringdomainthatispresentacrosseukaryotes AT victorhugoaguilarhernandez ctlsanewclassofringh2ubiquitinligasesuncoveredbyyeellamotifclosetotheringdomainthatispresentacrosseukaryotes AT plinioantonioguzmanvillate ctlsanewclassofringh2ubiquitinligasesuncoveredbyyeellamotifclosetotheringdomainthatispresentacrosseukaryotes |
_version_ |
1756089259897389056 |