Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558

The present study describes a new set of 61 polymorphic microsatellite markers for beans and the construction of a genetic map using the BAT93 x Jalo EEP558 (BJ) population for the purpose of developing a reference linkage map for common bean (Phaseolus vulgaris). The main objectives were to integrate new microsatellites on the existing framework map of the BJ population, and to develop the first linkage map for the BJ population based exclusively on microsatellites. Of the total of 264 microsatellites evaluated for polymorphism, 42.8% showed polymorphism between the genitors. An integrated map was created totaling 199 mapped markers in 13 linkage groups, with an observed length of 1358 cM and a mean distance between markers of 7.23 cM. For the map constructed exclusively with microsatellites, 106 markers were placed in 12 groups with a total length of 606.8 cM and average distance of 6.8 cM. Linkage group designation and marker order for BM microsatellites generally agreed with previous mapping, while the new microsatellites were well distributed across the genome, corroborating the utility of the BJ population for a reference map. The extensive use of the microsatellites and the availability of a reference map can help in the development of other genetic maps for common bean through the transfer of information of marker order and linkage, which will allow comparative analysis and map integration, especially for future quantitative trait loci and association mapping studies.

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Main Authors: Grisi, MCM, Blair, Matthew W., Gepts, Paul L., Brondani, C., Pereira, PAA, Brondani, Rosana Pereira V.
Format: Journal Article biblioteca
Language:English
Published: 2007
Subjects:phaseolus vulgaris, genetic maps, microsatellites, genetic markers, mapas genéticos, microsatélites, marcadores genéticos,
Online Access:https://hdl.handle.net/10568/42897
http://www.funpecrp.com.br/gmr/year2007/vol3-6/gmr0340_full_text.html
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spelling dig-cgspace-10568-428972021-10-08T18:16:22Z Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558 Grisi, MCM Blair, Matthew W. Gepts, Paul L. Brondani, C. Pereira, PAA Brondani, Rosana Pereira V. phaseolus vulgaris genetic maps microsatellites genetic markers mapas genéticos microsatélites marcadores genéticos The present study describes a new set of 61 polymorphic microsatellite markers for beans and the construction of a genetic map using the BAT93 x Jalo EEP558 (BJ) population for the purpose of developing a reference linkage map for common bean (Phaseolus vulgaris). The main objectives were to integrate new microsatellites on the existing framework map of the BJ population, and to develop the first linkage map for the BJ population based exclusively on microsatellites. Of the total of 264 microsatellites evaluated for polymorphism, 42.8% showed polymorphism between the genitors. An integrated map was created totaling 199 mapped markers in 13 linkage groups, with an observed length of 1358 cM and a mean distance between markers of 7.23 cM. For the map constructed exclusively with microsatellites, 106 markers were placed in 12 groups with a total length of 606.8 cM and average distance of 6.8 cM. Linkage group designation and marker order for BM microsatellites generally agreed with previous mapping, while the new microsatellites were well distributed across the genome, corroborating the utility of the BJ population for a reference map. The extensive use of the microsatellites and the availability of a reference map can help in the development of other genetic maps for common bean through the transfer of information of marker order and linkage, which will allow comparative analysis and map integration, especially for future quantitative trait loci and association mapping studies. 2007 2014-09-24T07:58:44Z 2014-09-24T07:58:44Z Journal Article 1676-5680 https://hdl.handle.net/10568/42897 http://www.funpecrp.com.br/gmr/year2007/vol3-6/gmr0340_full_text.html en Open Access Genetics and Molecular Research
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic phaseolus vulgaris
genetic maps
microsatellites
genetic markers
mapas genéticos
microsatélites
marcadores genéticos
phaseolus vulgaris
genetic maps
microsatellites
genetic markers
mapas genéticos
microsatélites
marcadores genéticos
spellingShingle phaseolus vulgaris
genetic maps
microsatellites
genetic markers
mapas genéticos
microsatélites
marcadores genéticos
phaseolus vulgaris
genetic maps
microsatellites
genetic markers
mapas genéticos
microsatélites
marcadores genéticos
Grisi, MCM
Blair, Matthew W.
Gepts, Paul L.
Brondani, C.
Pereira, PAA
Brondani, Rosana Pereira V.
Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
description The present study describes a new set of 61 polymorphic microsatellite markers for beans and the construction of a genetic map using the BAT93 x Jalo EEP558 (BJ) population for the purpose of developing a reference linkage map for common bean (Phaseolus vulgaris). The main objectives were to integrate new microsatellites on the existing framework map of the BJ population, and to develop the first linkage map for the BJ population based exclusively on microsatellites. Of the total of 264 microsatellites evaluated for polymorphism, 42.8% showed polymorphism between the genitors. An integrated map was created totaling 199 mapped markers in 13 linkage groups, with an observed length of 1358 cM and a mean distance between markers of 7.23 cM. For the map constructed exclusively with microsatellites, 106 markers were placed in 12 groups with a total length of 606.8 cM and average distance of 6.8 cM. Linkage group designation and marker order for BM microsatellites generally agreed with previous mapping, while the new microsatellites were well distributed across the genome, corroborating the utility of the BJ population for a reference map. The extensive use of the microsatellites and the availability of a reference map can help in the development of other genetic maps for common bean through the transfer of information of marker order and linkage, which will allow comparative analysis and map integration, especially for future quantitative trait loci and association mapping studies.
format Journal Article
topic_facet phaseolus vulgaris
genetic maps
microsatellites
genetic markers
mapas genéticos
microsatélites
marcadores genéticos
author Grisi, MCM
Blair, Matthew W.
Gepts, Paul L.
Brondani, C.
Pereira, PAA
Brondani, Rosana Pereira V.
author_facet Grisi, MCM
Blair, Matthew W.
Gepts, Paul L.
Brondani, C.
Pereira, PAA
Brondani, Rosana Pereira V.
author_sort Grisi, MCM
title Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
title_short Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
title_full Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
title_fullStr Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
title_full_unstemmed Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558
title_sort genetic mapping of a new set of microsatellite markers in a reference common bean (phaseolus vulgaris) population bat93 x jalo eep558
publishDate 2007
url https://hdl.handle.net/10568/42897
http://www.funpecrp.com.br/gmr/year2007/vol3-6/gmr0340_full_text.html
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