Sheep genetic diversity in Bhutan using microsatellite markers

Genotype data from eight microsatellite markers were used to assess genetic diversity and relationships among five indigenous Bhutanese sheep populations, Sakten, Jakar, Sarpang, Sipsu and Tsirang. Estimates of mean observed and expected heterozygosities, mean number of alleles per locus/population were obtained. The highest observed heterozygosities were found in Jakar (0.657) and Sakten (0.647), while the lowest one was found in Tsirang (0.539). Genetic distances, pairwise proportion of different alleles, UPGMA tree, and principal component analysis indicate close relationship among Tsirang, Sipsu and Sarpang populations, while Jakar and Sakten populations are located in one cluster. These two clusters are separated geographically, and show distinct phenotypic as well as molecular characters. We therefore recommend that the Bhutanese native sheep populations be classified into at least two distinct breeds, Jakar-Sakten sheep and Sipsu sheep. Since Jakar and Sakten sheep have different morphological phenotypes, further analyses will be required to understand the genetic differences between these two sheep populations.

Saved in:
Bibliographic Details
Main Authors: Tashi, D., Wafula, P., Yoshio, Y., Shinji, S., Kenji, O., Hanotte, Olivier H., Bang-Zhong, L., Hideyuki, M., Han Jianlin
Format: Journal Article biblioteca
Language:English
Published: Wiley 2010-04
Subjects:sheep, genetics,
Online Access:https://hdl.handle.net/10568/1745
https://doi.org/10.1111/j.1740-0929.2009.00723.x
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cgspace-10568-1745
record_format koha
spelling dig-cgspace-10568-17452023-12-27T19:59:53Z Sheep genetic diversity in Bhutan using microsatellite markers Tashi, D. Wafula, P. Yoshio, Y. Shinji, S. Kenji, O. Hanotte, Olivier H. Bang-Zhong, L. Hideyuki, M. Han Jianlin sheep genetics Genotype data from eight microsatellite markers were used to assess genetic diversity and relationships among five indigenous Bhutanese sheep populations, Sakten, Jakar, Sarpang, Sipsu and Tsirang. Estimates of mean observed and expected heterozygosities, mean number of alleles per locus/population were obtained. The highest observed heterozygosities were found in Jakar (0.657) and Sakten (0.647), while the lowest one was found in Tsirang (0.539). Genetic distances, pairwise proportion of different alleles, UPGMA tree, and principal component analysis indicate close relationship among Tsirang, Sipsu and Sarpang populations, while Jakar and Sakten populations are located in one cluster. These two clusters are separated geographically, and show distinct phenotypic as well as molecular characters. We therefore recommend that the Bhutanese native sheep populations be classified into at least two distinct breeds, Jakar-Sakten sheep and Sipsu sheep. Since Jakar and Sakten sheep have different morphological phenotypes, further analyses will be required to understand the genetic differences between these two sheep populations. 2010-04 2010-05-28T19:10:27Z 2010-05-28T19:10:27Z Journal Article Tashi Dorji; Jianlin, H.; Wafula, P.; Yoshio Yamamoto; Shinji Sasazaki; Kenji Oyama; Hanotte, O.; Bang-Zhong Lin; Hideyuki Mannen. 2010. Sheep genetic diversity in Bhutan using microsatellite markers. Animal Science Journal 81(2):145-151. 1344-3941 1740-0929 https://hdl.handle.net/10568/1745 https://doi.org/10.1111/j.1740-0929.2009.00723.x en Copyrighted; all rights reserved Limited Access p. 145-151 Wiley Animal Science Journal
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic sheep
genetics
sheep
genetics
spellingShingle sheep
genetics
sheep
genetics
Tashi, D.
Wafula, P.
Yoshio, Y.
Shinji, S.
Kenji, O.
Hanotte, Olivier H.
Bang-Zhong, L.
Hideyuki, M.
Han Jianlin
Sheep genetic diversity in Bhutan using microsatellite markers
description Genotype data from eight microsatellite markers were used to assess genetic diversity and relationships among five indigenous Bhutanese sheep populations, Sakten, Jakar, Sarpang, Sipsu and Tsirang. Estimates of mean observed and expected heterozygosities, mean number of alleles per locus/population were obtained. The highest observed heterozygosities were found in Jakar (0.657) and Sakten (0.647), while the lowest one was found in Tsirang (0.539). Genetic distances, pairwise proportion of different alleles, UPGMA tree, and principal component analysis indicate close relationship among Tsirang, Sipsu and Sarpang populations, while Jakar and Sakten populations are located in one cluster. These two clusters are separated geographically, and show distinct phenotypic as well as molecular characters. We therefore recommend that the Bhutanese native sheep populations be classified into at least two distinct breeds, Jakar-Sakten sheep and Sipsu sheep. Since Jakar and Sakten sheep have different morphological phenotypes, further analyses will be required to understand the genetic differences between these two sheep populations.
format Journal Article
topic_facet sheep
genetics
author Tashi, D.
Wafula, P.
Yoshio, Y.
Shinji, S.
Kenji, O.
Hanotte, Olivier H.
Bang-Zhong, L.
Hideyuki, M.
Han Jianlin
author_facet Tashi, D.
Wafula, P.
Yoshio, Y.
Shinji, S.
Kenji, O.
Hanotte, Olivier H.
Bang-Zhong, L.
Hideyuki, M.
Han Jianlin
author_sort Tashi, D.
title Sheep genetic diversity in Bhutan using microsatellite markers
title_short Sheep genetic diversity in Bhutan using microsatellite markers
title_full Sheep genetic diversity in Bhutan using microsatellite markers
title_fullStr Sheep genetic diversity in Bhutan using microsatellite markers
title_full_unstemmed Sheep genetic diversity in Bhutan using microsatellite markers
title_sort sheep genetic diversity in bhutan using microsatellite markers
publisher Wiley
publishDate 2010-04
url https://hdl.handle.net/10568/1745
https://doi.org/10.1111/j.1740-0929.2009.00723.x
work_keys_str_mv AT tashid sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT wafulap sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT yoshioy sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT shinjis sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT kenjio sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT hanotteolivierh sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT bangzhongl sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT hideyukim sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
AT hanjianlin sheepgeneticdiversityinbhutanusingmicrosatellitemarkers
_version_ 1787231708191391744