Population genomics unravels the Holocene history of Triticum-Aegilops species

Deep knowledge of crop biodiversity is essential to improve global food security. Despite bread wheat serving as a keystone crop worldwide, the population history of bread wheat and its wild relatives (a.k.a. wheats) remains elusive. By analyzing whole-genome sequences of 795 wheats, we found that bread wheat originated southwest of the Caspian Sea ∼11,700 years ago and underwent a slow speciation process, lasting ∼3,300 years due to persistent gene flow from wild relatives. Soon after, bread wheat spread across Eurasia and reached Europe, South Asia, and East Asia ∼7,000 to ∼5,000 years ago, shaping a diversified but occasionally convergent adaptive landscape of bread wheat in novel environments. Opposite to cultivated wheat, wild wheat populations have declined by ∼82% in the past ∼2,000 years due to the food choice shift of humans, and likely continue to drop because of the changing climate. These findings will guide future efforts in protecting and utilizing wheat biodiversity to improve global food security.

Saved in:
Bibliographic Details
Main Authors: Zhao, X., Deng, T., Kang, L., Bi, A., Xu, D., Zhang, Z., Jijin, Z.H.G., Yang, X., Xu, J., Xu, S., Song, X., Zhang, M., Li, Y., Kear, P., Wang, J., Yin, C., Liu, Z., Li, W., Lu, F.
Format: Journal Article biblioteca
Language:English
Published: 2022-04-10
Subjects:population, genomics, triticum, aegilops,
Online Access:https://hdl.handle.net/10568/130612
https://doi.org/10.1101/2022.04.07.487499
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cgspace-10568-130612
record_format koha
spelling dig-cgspace-10568-1306122023-07-10T19:56:40Z Population genomics unravels the Holocene history of Triticum-Aegilops species Zhao, X. Deng, T. Kang, L. Bi, A. Xu, D. Zhang, Z. Jijin, Z.H.G. Yang, X. Xu, J. Xu, S. Song, X. Zhang, M. Li, Y. Kear, P. Wang, J. Yin, C. Liu, Z. Li, W. Lu, F. population genomics triticum aegilops Deep knowledge of crop biodiversity is essential to improve global food security. Despite bread wheat serving as a keystone crop worldwide, the population history of bread wheat and its wild relatives (a.k.a. wheats) remains elusive. By analyzing whole-genome sequences of 795 wheats, we found that bread wheat originated southwest of the Caspian Sea ∼11,700 years ago and underwent a slow speciation process, lasting ∼3,300 years due to persistent gene flow from wild relatives. Soon after, bread wheat spread across Eurasia and reached Europe, South Asia, and East Asia ∼7,000 to ∼5,000 years ago, shaping a diversified but occasionally convergent adaptive landscape of bread wheat in novel environments. Opposite to cultivated wheat, wild wheat populations have declined by ∼82% in the past ∼2,000 years due to the food choice shift of humans, and likely continue to drop because of the changing climate. These findings will guide future efforts in protecting and utilizing wheat biodiversity to improve global food security. 2022-04-10 2023-06-02T18:30:14Z 2023-06-02T18:30:14Z Journal Article Zhao, X.; Deng, T.; Kang, L.; Bi, A.; Xu, D.; Zhang, Z.; Jijin, Z.H.G.; Yang, X.; Xu, J.; Xu, S.; Song, X.; Zhang, M.; Li, Y.; Kear, P.; Wang, J.; Yin, C.; Liu, Z.; Li, W.; Lu, F. 2022. Population genomics unravels the Holocene history of Triticum-Aegilops species. bioRxiv. ISSN 2692-8205. 47 p. 2692-8205 https://hdl.handle.net/10568/130612 https://doi.org/10.1101/2022.04.07.487499 en CC-BY-NC-ND-4.0 Open Access 47 p. Biorxiv
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic population
genomics
triticum
aegilops
population
genomics
triticum
aegilops
spellingShingle population
genomics
triticum
aegilops
population
genomics
triticum
aegilops
Zhao, X.
Deng, T.
Kang, L.
Bi, A.
Xu, D.
Zhang, Z.
Jijin, Z.H.G.
Yang, X.
Xu, J.
Xu, S.
Song, X.
Zhang, M.
Li, Y.
Kear, P.
Wang, J.
Yin, C.
Liu, Z.
Li, W.
Lu, F.
Population genomics unravels the Holocene history of Triticum-Aegilops species
description Deep knowledge of crop biodiversity is essential to improve global food security. Despite bread wheat serving as a keystone crop worldwide, the population history of bread wheat and its wild relatives (a.k.a. wheats) remains elusive. By analyzing whole-genome sequences of 795 wheats, we found that bread wheat originated southwest of the Caspian Sea ∼11,700 years ago and underwent a slow speciation process, lasting ∼3,300 years due to persistent gene flow from wild relatives. Soon after, bread wheat spread across Eurasia and reached Europe, South Asia, and East Asia ∼7,000 to ∼5,000 years ago, shaping a diversified but occasionally convergent adaptive landscape of bread wheat in novel environments. Opposite to cultivated wheat, wild wheat populations have declined by ∼82% in the past ∼2,000 years due to the food choice shift of humans, and likely continue to drop because of the changing climate. These findings will guide future efforts in protecting and utilizing wheat biodiversity to improve global food security.
format Journal Article
topic_facet population
genomics
triticum
aegilops
author Zhao, X.
Deng, T.
Kang, L.
Bi, A.
Xu, D.
Zhang, Z.
Jijin, Z.H.G.
Yang, X.
Xu, J.
Xu, S.
Song, X.
Zhang, M.
Li, Y.
Kear, P.
Wang, J.
Yin, C.
Liu, Z.
Li, W.
Lu, F.
author_facet Zhao, X.
Deng, T.
Kang, L.
Bi, A.
Xu, D.
Zhang, Z.
Jijin, Z.H.G.
Yang, X.
Xu, J.
Xu, S.
Song, X.
Zhang, M.
Li, Y.
Kear, P.
Wang, J.
Yin, C.
Liu, Z.
Li, W.
Lu, F.
author_sort Zhao, X.
title Population genomics unravels the Holocene history of Triticum-Aegilops species
title_short Population genomics unravels the Holocene history of Triticum-Aegilops species
title_full Population genomics unravels the Holocene history of Triticum-Aegilops species
title_fullStr Population genomics unravels the Holocene history of Triticum-Aegilops species
title_full_unstemmed Population genomics unravels the Holocene history of Triticum-Aegilops species
title_sort population genomics unravels the holocene history of triticum-aegilops species
publishDate 2022-04-10
url https://hdl.handle.net/10568/130612
https://doi.org/10.1101/2022.04.07.487499
work_keys_str_mv AT zhaox populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT dengt populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT kangl populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT bia populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT xud populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT zhangz populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT jijinzhg populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT yangx populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT xuj populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT xus populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT songx populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT zhangm populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT liy populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT kearp populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT wangj populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT yinc populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT liuz populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT liw populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
AT luf populationgenomicsunravelstheholocenehistoryoftriticumaegilopsspecies
_version_ 1779055450436665344