Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan

Kazakhstan is the fourteenth largest wheat producer in the world. Despite this fact, there has not been a comprehensive survey of wheat root and crown rot. A quantitative survey was conducted for the purpose of establishing the distribution of fungi associated with root and crown rot on wheat (Triticum spp.). During the 2019 growing season, samples were taken from the affected plants’ roots and stem bases. A total of 1221 fungal isolates were acquired from 65 sites across the central (Karagandy region), eastern (East Kazakhstan region), and southeastern (Almaty region) parts of the country and identified using morphological and molecular tools. The internal transcribed spacer (ITS), translation elongation factor 1-alpha (EF1-α), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) sequences were successfully used to identify the species of fungal isolates. It was found that Bipolaris sorokiniana (44.80%) and Fusarium acuminatum (20.39%) were the most predominant fungal species isolated, which were present in 86.15 and 66.15% of the fields surveyed, respectively, followed by F. equiseti (10.16%), Curvularia spicifera (7.62%), F. culmorum (4.75%), F. oxysporum (4.10%), F. redolens (2.38%), Rhizoctonia solani AG2-1 (1.06%), Nigrospora oryzae (0.98%), C. inaequalis (0.90%), F. pseudograminearum (0.74%), F. flocciferum (0.74%), Macrophomina phaseolina (0.66%), F. cf. incarnatum (0.33%), Fusarium sp. (0.25%), and F. torulosum (0.16%). A total of 74 isolates representing 16 species were tested via inoculation tests on the susceptible Triticum aestivum cv. Seri 82 and the results revealed that F. culmorum and F. pseudograminearum, B. sorokiniana, Fusarium sp., R. solani, F. redolens, C. spicifera, C. inaequalis, and N. oryzae were virulent, whereas others were non-pathogenic. The findings of this investigation demonstrate the presence of a diverse spectrum of pathogenic fungal species relevant to wheat crown and root rot in Kazakhstan. To the best of our knowledge, this is the first report of F. pseudograminearum, Fusarium sp., C. spicifera, and C. inaequalis as pathogens on wheat in Kazakhstan.

Saved in:
Bibliographic Details
Main Authors: Bozoglu, Tuğba, Derviş, Sibel, Imren, Mustafa, Amer, Mohammed, Ozdemir, Fatih, Paulitz, Timothy C., Morgounov, Alexey I., Dababat, Abdelfattah A., Özer, Göksel
Format: Journal Article biblioteca
Language:English
Published: MDPI 2022-04-19
Subjects:wheat, diseases, fusarium, pathogenicity, fungi, research,
Online Access:https://hdl.handle.net/10568/129088
https://hdl.handle.net/10883/22237
https://doi.org/10.3390/jof8050417
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cgspace-10568-129088
record_format koha
spelling dig-cgspace-10568-1290882023-12-08T19:36:04Z Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan Bozoglu, Tuğba Derviş, Sibel Imren, Mustafa Amer, Mohammed Ozdemir, Fatih Paulitz, Timothy C. Morgounov, Alexey I. Dababat, Abdelfattah A. Özer, Göksel wheat diseases fusarium pathogenicity fungi research Kazakhstan is the fourteenth largest wheat producer in the world. Despite this fact, there has not been a comprehensive survey of wheat root and crown rot. A quantitative survey was conducted for the purpose of establishing the distribution of fungi associated with root and crown rot on wheat (Triticum spp.). During the 2019 growing season, samples were taken from the affected plants’ roots and stem bases. A total of 1221 fungal isolates were acquired from 65 sites across the central (Karagandy region), eastern (East Kazakhstan region), and southeastern (Almaty region) parts of the country and identified using morphological and molecular tools. The internal transcribed spacer (ITS), translation elongation factor 1-alpha (EF1-α), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) sequences were successfully used to identify the species of fungal isolates. It was found that Bipolaris sorokiniana (44.80%) and Fusarium acuminatum (20.39%) were the most predominant fungal species isolated, which were present in 86.15 and 66.15% of the fields surveyed, respectively, followed by F. equiseti (10.16%), Curvularia spicifera (7.62%), F. culmorum (4.75%), F. oxysporum (4.10%), F. redolens (2.38%), Rhizoctonia solani AG2-1 (1.06%), Nigrospora oryzae (0.98%), C. inaequalis (0.90%), F. pseudograminearum (0.74%), F. flocciferum (0.74%), Macrophomina phaseolina (0.66%), F. cf. incarnatum (0.33%), Fusarium sp. (0.25%), and F. torulosum (0.16%). A total of 74 isolates representing 16 species were tested via inoculation tests on the susceptible Triticum aestivum cv. Seri 82 and the results revealed that F. culmorum and F. pseudograminearum, B. sorokiniana, Fusarium sp., R. solani, F. redolens, C. spicifera, C. inaequalis, and N. oryzae were virulent, whereas others were non-pathogenic. The findings of this investigation demonstrate the presence of a diverse spectrum of pathogenic fungal species relevant to wheat crown and root rot in Kazakhstan. To the best of our knowledge, this is the first report of F. pseudograminearum, Fusarium sp., C. spicifera, and C. inaequalis as pathogens on wheat in Kazakhstan. 2022-04-19 2023-02-28T08:59:41Z 2023-02-28T08:59:41Z Journal Article Bozoğlu, T., Derviş, S., Imren, M., Amer, M., Özdemir, F., Paulitz, T. C., Morgounov, A., Dababat, A. A. and Özer, G. 2022. Fungal pathogens associated with crown and root rot of wheat in central, eastern, and southeastern kazakhstan. Journal of Fungi 8(5):417. https://hdl.handle.net/10883/22237 2309-608X https://hdl.handle.net/10568/129088 https://hdl.handle.net/10883/22237 https://doi.org/10.3390/jof8050417 en CC-BY-4.0 Open Access application/pdf MDPI Journal of Fungi
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic wheat
diseases
fusarium
pathogenicity
fungi
research
wheat
diseases
fusarium
pathogenicity
fungi
research
spellingShingle wheat
diseases
fusarium
pathogenicity
fungi
research
wheat
diseases
fusarium
pathogenicity
fungi
research
Bozoglu, Tuğba
Derviş, Sibel
Imren, Mustafa
Amer, Mohammed
Ozdemir, Fatih
Paulitz, Timothy C.
Morgounov, Alexey I.
Dababat, Abdelfattah A.
Özer, Göksel
Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
description Kazakhstan is the fourteenth largest wheat producer in the world. Despite this fact, there has not been a comprehensive survey of wheat root and crown rot. A quantitative survey was conducted for the purpose of establishing the distribution of fungi associated with root and crown rot on wheat (Triticum spp.). During the 2019 growing season, samples were taken from the affected plants’ roots and stem bases. A total of 1221 fungal isolates were acquired from 65 sites across the central (Karagandy region), eastern (East Kazakhstan region), and southeastern (Almaty region) parts of the country and identified using morphological and molecular tools. The internal transcribed spacer (ITS), translation elongation factor 1-alpha (EF1-α), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) sequences were successfully used to identify the species of fungal isolates. It was found that Bipolaris sorokiniana (44.80%) and Fusarium acuminatum (20.39%) were the most predominant fungal species isolated, which were present in 86.15 and 66.15% of the fields surveyed, respectively, followed by F. equiseti (10.16%), Curvularia spicifera (7.62%), F. culmorum (4.75%), F. oxysporum (4.10%), F. redolens (2.38%), Rhizoctonia solani AG2-1 (1.06%), Nigrospora oryzae (0.98%), C. inaequalis (0.90%), F. pseudograminearum (0.74%), F. flocciferum (0.74%), Macrophomina phaseolina (0.66%), F. cf. incarnatum (0.33%), Fusarium sp. (0.25%), and F. torulosum (0.16%). A total of 74 isolates representing 16 species were tested via inoculation tests on the susceptible Triticum aestivum cv. Seri 82 and the results revealed that F. culmorum and F. pseudograminearum, B. sorokiniana, Fusarium sp., R. solani, F. redolens, C. spicifera, C. inaequalis, and N. oryzae were virulent, whereas others were non-pathogenic. The findings of this investigation demonstrate the presence of a diverse spectrum of pathogenic fungal species relevant to wheat crown and root rot in Kazakhstan. To the best of our knowledge, this is the first report of F. pseudograminearum, Fusarium sp., C. spicifera, and C. inaequalis as pathogens on wheat in Kazakhstan.
format Journal Article
topic_facet wheat
diseases
fusarium
pathogenicity
fungi
research
author Bozoglu, Tuğba
Derviş, Sibel
Imren, Mustafa
Amer, Mohammed
Ozdemir, Fatih
Paulitz, Timothy C.
Morgounov, Alexey I.
Dababat, Abdelfattah A.
Özer, Göksel
author_facet Bozoglu, Tuğba
Derviş, Sibel
Imren, Mustafa
Amer, Mohammed
Ozdemir, Fatih
Paulitz, Timothy C.
Morgounov, Alexey I.
Dababat, Abdelfattah A.
Özer, Göksel
author_sort Bozoglu, Tuğba
title Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
title_short Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
title_full Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
title_fullStr Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
title_full_unstemmed Fungal pathogens associated with crown and root rot of wheat in Central, Eastern, and Southeastern Kazakhstan
title_sort fungal pathogens associated with crown and root rot of wheat in central, eastern, and southeastern kazakhstan
publisher MDPI
publishDate 2022-04-19
url https://hdl.handle.net/10568/129088
https://hdl.handle.net/10883/22237
https://doi.org/10.3390/jof8050417
work_keys_str_mv AT bozoglutugba fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT dervissibel fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT imrenmustafa fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT amermohammed fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT ozdemirfatih fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT paulitztimothyc fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT morgounovalexeyi fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT dababatabdelfattaha fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
AT ozergoksel fungalpathogensassociatedwithcrownandrootrotofwheatincentraleasternandsoutheasternkazakhstan
_version_ 1787231879502495744