GWAS case studies in wheat

With the advancements in next-generation sequencing technologies, leading to millions of single nucleotide polymorphisms in all crop species including wheat, genome-wide association study (GWAS) has become a leading approach for trait dissection. In wheat, GWAS has been conducted for a plethora of traits and more and more studies are being conducted and reported in journals. While application of GWAS has become a routine in wheat using the standardized approaches, there has been a great leap forward using newer models and combination of GWAS with other sets of data. This chapter has reviewed all these latest advancements in GWAS in wheat by citing the most important studies and their outputs. Specially, we have focused on studies that conducted meta-GWAS, multilocus GWAS, haplotype-based GWAS, Environmental- and Eigen-GWAS, and/or GWAS combined with gene regulatory network and pathway analyses or epistatic interactions analyses; all these have taken the association mapping approach to new heights in wheat.

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Bibliographic Details
Main Authors: Sehgal, Deepmala, Dreisigacker, Susanne
Format: Book Chapter biblioteca
Language:English
Published: Springer 2022
Subjects:genetics, haplotypes, phenotypes, quantitative trait loci, wheat,
Online Access:https://hdl.handle.net/10568/126248
https://doi.org/10.1007/978-1-0716-2237-7_19
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spelling dig-cgspace-10568-1262482023-12-08T19:36:04Z GWAS case studies in wheat Sehgal, Deepmala Dreisigacker, Susanne genetics haplotypes phenotypes quantitative trait loci wheat With the advancements in next-generation sequencing technologies, leading to millions of single nucleotide polymorphisms in all crop species including wheat, genome-wide association study (GWAS) has become a leading approach for trait dissection. In wheat, GWAS has been conducted for a plethora of traits and more and more studies are being conducted and reported in journals. While application of GWAS has become a routine in wheat using the standardized approaches, there has been a great leap forward using newer models and combination of GWAS with other sets of data. This chapter has reviewed all these latest advancements in GWAS in wheat by citing the most important studies and their outputs. Specially, we have focused on studies that conducted meta-GWAS, multilocus GWAS, haplotype-based GWAS, Environmental- and Eigen-GWAS, and/or GWAS combined with gene regulatory network and pathway analyses or epistatic interactions analyses; all these have taken the association mapping approach to new heights in wheat. 2022 2022-12-22T13:08:05Z 2022-12-22T13:08:05Z Book Chapter Sehgal, D., & Dreisigacker, S. (2022). GWAS case studies in wheat. In D. Torkamaneh & F. Belzile (Eds.), Genome-Wide Association Studies (Vol. 2481, pp. 341–351). Springer US. 9781071622360 9781071622377 1064-3745 1940-6029 https://hdl.handle.net/10568/126248 https://doi.org/10.1007/978-1-0716-2237-7_19 en Copyrighted; all rights reserved Limited Access p. 341-351 Springer
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic genetics
haplotypes
phenotypes
quantitative trait loci
wheat
genetics
haplotypes
phenotypes
quantitative trait loci
wheat
spellingShingle genetics
haplotypes
phenotypes
quantitative trait loci
wheat
genetics
haplotypes
phenotypes
quantitative trait loci
wheat
Sehgal, Deepmala
Dreisigacker, Susanne
GWAS case studies in wheat
description With the advancements in next-generation sequencing technologies, leading to millions of single nucleotide polymorphisms in all crop species including wheat, genome-wide association study (GWAS) has become a leading approach for trait dissection. In wheat, GWAS has been conducted for a plethora of traits and more and more studies are being conducted and reported in journals. While application of GWAS has become a routine in wheat using the standardized approaches, there has been a great leap forward using newer models and combination of GWAS with other sets of data. This chapter has reviewed all these latest advancements in GWAS in wheat by citing the most important studies and their outputs. Specially, we have focused on studies that conducted meta-GWAS, multilocus GWAS, haplotype-based GWAS, Environmental- and Eigen-GWAS, and/or GWAS combined with gene regulatory network and pathway analyses or epistatic interactions analyses; all these have taken the association mapping approach to new heights in wheat.
format Book Chapter
topic_facet genetics
haplotypes
phenotypes
quantitative trait loci
wheat
author Sehgal, Deepmala
Dreisigacker, Susanne
author_facet Sehgal, Deepmala
Dreisigacker, Susanne
author_sort Sehgal, Deepmala
title GWAS case studies in wheat
title_short GWAS case studies in wheat
title_full GWAS case studies in wheat
title_fullStr GWAS case studies in wheat
title_full_unstemmed GWAS case studies in wheat
title_sort gwas case studies in wheat
publisher Springer
publishDate 2022
url https://hdl.handle.net/10568/126248
https://doi.org/10.1007/978-1-0716-2237-7_19
work_keys_str_mv AT sehgaldeepmala gwascasestudiesinwheat
AT dreisigackersusanne gwascasestudiesinwheat
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