Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics

Background Livestock have been implicated as a reservoir for antimicrobial resistance (AMR) that can spread to humans. Close proximity and ecological interfaces involving livestock have been posited as risk factors for the transmission of AMR. In spite of this, there are sparse data and limited agreement on the transmission dynamics that occur. Objectives To identify how genome sequencing approaches can be used to quantify the dynamics of AMR transmission at the human–livestock interface, and where current knowledge can be improved to better understand the impact of transmission on the spread of AMR. Sources Key articles investigating various aspects of AMR transmission at the human–livestock interface are discussed, with a focus on Escherichia coli. Content We recapitulate the current understanding of the transmission of AMR between humans and livestock based on current genomic and epidemiological approaches. We discuss how the use of well-designed, high-resolution genome sequencing studies can improve our understanding of the human–livestock interface. Implications A better understanding of the human–livestock interface will aid in the development of evidence-based and effective One Health interventions that can ultimately reduce the burden of AMR in humans.

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Main Authors: Wee, B.A., Muloi, D.M., Bunnik, B.A.D. van
Format: Journal Article biblioteca
Language:English
Published: Elsevier 2020-12
Subjects:antimicrobial resistance, livestock, health, humans, genomics,
Online Access:https://hdl.handle.net/10568/110142
https://doi.org/10.1016/j.cmi.2020.09.019
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spelling dig-cgspace-10568-1101422023-12-08T19:36:04Z Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics Wee, B.A. Muloi, D.M. Bunnik, B.A.D. van antimicrobial resistance livestock health humans genomics Background Livestock have been implicated as a reservoir for antimicrobial resistance (AMR) that can spread to humans. Close proximity and ecological interfaces involving livestock have been posited as risk factors for the transmission of AMR. In spite of this, there are sparse data and limited agreement on the transmission dynamics that occur. Objectives To identify how genome sequencing approaches can be used to quantify the dynamics of AMR transmission at the human–livestock interface, and where current knowledge can be improved to better understand the impact of transmission on the spread of AMR. Sources Key articles investigating various aspects of AMR transmission at the human–livestock interface are discussed, with a focus on Escherichia coli. Content We recapitulate the current understanding of the transmission of AMR between humans and livestock based on current genomic and epidemiological approaches. We discuss how the use of well-designed, high-resolution genome sequencing studies can improve our understanding of the human–livestock interface. Implications A better understanding of the human–livestock interface will aid in the development of evidence-based and effective One Health interventions that can ultimately reduce the burden of AMR in humans. 2020-12 2020-11-12T13:53:39Z 2020-11-12T13:53:39Z Journal Article Wee, B.A., Muloi, D.M. and Bunnik, B.A.D. van. 2020. Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics. Clinical Microbiology and Infection 26(12): 1612–1616. 1198-743X https://hdl.handle.net/10568/110142 https://doi.org/10.1016/j.cmi.2020.09.019 en CC-BY-4.0 Open Access p. 1612-1616 Elsevier Clinical Microbiology and Infection
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic antimicrobial resistance
livestock
health
humans
genomics
antimicrobial resistance
livestock
health
humans
genomics
spellingShingle antimicrobial resistance
livestock
health
humans
genomics
antimicrobial resistance
livestock
health
humans
genomics
Wee, B.A.
Muloi, D.M.
Bunnik, B.A.D. van
Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
description Background Livestock have been implicated as a reservoir for antimicrobial resistance (AMR) that can spread to humans. Close proximity and ecological interfaces involving livestock have been posited as risk factors for the transmission of AMR. In spite of this, there are sparse data and limited agreement on the transmission dynamics that occur. Objectives To identify how genome sequencing approaches can be used to quantify the dynamics of AMR transmission at the human–livestock interface, and where current knowledge can be improved to better understand the impact of transmission on the spread of AMR. Sources Key articles investigating various aspects of AMR transmission at the human–livestock interface are discussed, with a focus on Escherichia coli. Content We recapitulate the current understanding of the transmission of AMR between humans and livestock based on current genomic and epidemiological approaches. We discuss how the use of well-designed, high-resolution genome sequencing studies can improve our understanding of the human–livestock interface. Implications A better understanding of the human–livestock interface will aid in the development of evidence-based and effective One Health interventions that can ultimately reduce the burden of AMR in humans.
format Journal Article
topic_facet antimicrobial resistance
livestock
health
humans
genomics
author Wee, B.A.
Muloi, D.M.
Bunnik, B.A.D. van
author_facet Wee, B.A.
Muloi, D.M.
Bunnik, B.A.D. van
author_sort Wee, B.A.
title Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
title_short Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
title_full Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
title_fullStr Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
title_full_unstemmed Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
title_sort quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
publisher Elsevier
publishDate 2020-12
url https://hdl.handle.net/10568/110142
https://doi.org/10.1016/j.cmi.2020.09.019
work_keys_str_mv AT weeba quantifyingthetransmissionofantimicrobialresistanceatthehumanandlivestockinterfacewithgenomics
AT muloidm quantifyingthetransmissionofantimicrobialresistanceatthehumanandlivestockinterfacewithgenomics
AT bunnikbadvan quantifyingthetransmissionofantimicrobialresistanceatthehumanandlivestockinterfacewithgenomics
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