Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea

Understanding the scale at which wild stocks of Persian sturgeon (Acipenser persicus) are genetically discrete is necessary for effective management of this commercially important species. Disomic DNA microsatellite markers are among the best tools for determining stock structure in fishes. As all sturgeon species have a polyploid ancestry of all sturgeons, most gene loci exhibit more than two alleles per individual, limiting the use of powerful analytical methods that commonly assume disomic inheritance. We scored products from 38 sets of microsatellite primers developed in lake (Acipenser fulvescens) and Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) to determine whether they would amplify disomic loci in Persian sturgeon. Samples of 45 individuals were detected. Thirty-six loci (95%) were amplified successfully in Persian sturgeon. We identified a single monomorphic locus, 12 disomic, 19 tetrasomic, three octosomic, and one locus that was ambiguous. This is the first report on development of disomic single-locus DNA microsatellite markers in Persian sturgeon. These loci could be used to characterize variation in geographically discrete populations of the Persian sturgeon in their native ecosystem including in the Caspian Sea.

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Main Authors: Moghim, M., Pourkazemi, M., Tan, S.G., Siraj, S.S., Panandam, J.M., Kor, D., Taghavi, M.J.
Format: article biblioteca
Language:English
Published: 2013
Subjects:Biology, Fisheries, Acipenser persicus, Caspian Sea, Single-locus DNA microsatellite markers, Iran,
Online Access:http://hdl.handle.net/1834/37369
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spelling dig-aquadocs-1834-373692021-07-08T01:58:29Z Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea Moghim, M. Pourkazemi, M. Tan, S.G. Siraj, S.S. Panandam, J.M. Kor, D. Taghavi, M.J. Biology Fisheries Acipenser persicus Caspian Sea Single-locus DNA microsatellite markers Iran Understanding the scale at which wild stocks of Persian sturgeon (Acipenser persicus) are genetically discrete is necessary for effective management of this commercially important species. Disomic DNA microsatellite markers are among the best tools for determining stock structure in fishes. As all sturgeon species have a polyploid ancestry of all sturgeons, most gene loci exhibit more than two alleles per individual, limiting the use of powerful analytical methods that commonly assume disomic inheritance. We scored products from 38 sets of microsatellite primers developed in lake (Acipenser fulvescens) and Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) to determine whether they would amplify disomic loci in Persian sturgeon. Samples of 45 individuals were detected. Thirty-six loci (95%) were amplified successfully in Persian sturgeon. We identified a single monomorphic locus, 12 disomic, 19 tetrasomic, three octosomic, and one locus that was ambiguous. This is the first report on development of disomic single-locus DNA microsatellite markers in Persian sturgeon. These loci could be used to characterize variation in geographically discrete populations of the Persian sturgeon in their native ecosystem including in the Caspian Sea. 2021-06-24T18:05:23Z 2021-06-24T18:05:23Z 2013 article TRUE 1562-2916 http://hdl.handle.net/1834/37369 en http://www.ifro.ir application/pdf application/pdf 389-397 http://aquaticcommons.org/id/eprint/22606 18721 2018-05-01 23:50:55 22606 Iranian Fisheries Science Research Institute
institution UNESCO
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-aquadocs
tag biblioteca
region Europa del Oeste
libraryname Repositorio AQUADOCS
language English
topic Biology
Fisheries
Acipenser persicus
Caspian Sea
Single-locus DNA microsatellite markers
Iran
Biology
Fisheries
Acipenser persicus
Caspian Sea
Single-locus DNA microsatellite markers
Iran
spellingShingle Biology
Fisheries
Acipenser persicus
Caspian Sea
Single-locus DNA microsatellite markers
Iran
Biology
Fisheries
Acipenser persicus
Caspian Sea
Single-locus DNA microsatellite markers
Iran
Moghim, M.
Pourkazemi, M.
Tan, S.G.
Siraj, S.S.
Panandam, J.M.
Kor, D.
Taghavi, M.J.
Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
description Understanding the scale at which wild stocks of Persian sturgeon (Acipenser persicus) are genetically discrete is necessary for effective management of this commercially important species. Disomic DNA microsatellite markers are among the best tools for determining stock structure in fishes. As all sturgeon species have a polyploid ancestry of all sturgeons, most gene loci exhibit more than two alleles per individual, limiting the use of powerful analytical methods that commonly assume disomic inheritance. We scored products from 38 sets of microsatellite primers developed in lake (Acipenser fulvescens) and Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) to determine whether they would amplify disomic loci in Persian sturgeon. Samples of 45 individuals were detected. Thirty-six loci (95%) were amplified successfully in Persian sturgeon. We identified a single monomorphic locus, 12 disomic, 19 tetrasomic, three octosomic, and one locus that was ambiguous. This is the first report on development of disomic single-locus DNA microsatellite markers in Persian sturgeon. These loci could be used to characterize variation in geographically discrete populations of the Persian sturgeon in their native ecosystem including in the Caspian Sea.
format article
topic_facet Biology
Fisheries
Acipenser persicus
Caspian Sea
Single-locus DNA microsatellite markers
Iran
author Moghim, M.
Pourkazemi, M.
Tan, S.G.
Siraj, S.S.
Panandam, J.M.
Kor, D.
Taghavi, M.J.
author_facet Moghim, M.
Pourkazemi, M.
Tan, S.G.
Siraj, S.S.
Panandam, J.M.
Kor, D.
Taghavi, M.J.
author_sort Moghim, M.
title Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
title_short Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
title_full Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
title_fullStr Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
title_full_unstemmed Development of disomic single-locus DNA microsatellite markers for Persian sturgeon (Acipenser persicus) of the Caspian Sea
title_sort development of disomic single-locus dna microsatellite markers for persian sturgeon (acipenser persicus) of the caspian sea
publishDate 2013
url http://hdl.handle.net/1834/37369
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