The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1

In order to assess the phylogenetic relationships of three rare species belonging to tribe Parablenniini was carried out, along the Coast of Oman Sea. Based on the type of habitats the specimens of Blenniid were collected from three sampling sites in the intertidal zones by Scoop and hand net in low tide and in sub-tidal zones by scuba diving and hand from 3, 6, 9, and 12m depths in September to March 2013. Totally 30 fish samples collected and deposited to the lab for further investigation. Based on the available identification keys and morphometric characters three species of Parablennius cornutus, Parabelennius pilicorn, Scartella emarginata were identified. DNA was extracted from the basal tissue of the first dorsal fin, subsequently by using a specific fish primer 700 bp of Cytochrome Oxidase C subunit 1 (CO1)was amplified in polymerase chain reaction (PCR) and sequenced. After comparison of Iranian Blenniid species CO1 sequence with sequence of 25 species from GenBank, was concluded that Iranian species are paraphyletically in the clade Parablenniini and sub-clads of Scartella and Parablennius. Since the relationship of Parablennius with other blenniids is the subject of many studies to resolve the conflicts and ambiguities among them we selected these genera to investigate the sister group relationship among them as well as other genera and clads. This is the first time that morphologic and molecular study of the two genera Parablennius and Scartella have been carried out in Iran.

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Main Authors: Attaran-Fariman, G., Estekani, S., Ghasemzadeh, J.
Format: article biblioteca
Language:Persian
Published: 2016
Subjects:Biology, Fisheries, Blenniidae, Paraphyletic, phylogeny, CO1, intertidal, sub tidal zones, Oman Sea, Parablennius cornutus, Parabelennius pilicorn, Scartella emarginata, species, DNA, Iran,
Online Access:http://hdl.handle.net/1834/36916
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spelling dig-aquadocs-1834-369162021-06-26T05:57:35Z The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1 Attaran-Fariman, G. Estekani, S. Ghasemzadeh, J. Biology Fisheries Blenniidae Paraphyletic phylogeny CO1 intertidal sub tidal zones Oman Sea Parablennius cornutus Parabelennius pilicorn Scartella emarginata species DNA Iran In order to assess the phylogenetic relationships of three rare species belonging to tribe Parablenniini was carried out, along the Coast of Oman Sea. Based on the type of habitats the specimens of Blenniid were collected from three sampling sites in the intertidal zones by Scoop and hand net in low tide and in sub-tidal zones by scuba diving and hand from 3, 6, 9, and 12m depths in September to March 2013. Totally 30 fish samples collected and deposited to the lab for further investigation. Based on the available identification keys and morphometric characters three species of Parablennius cornutus, Parabelennius pilicorn, Scartella emarginata were identified. DNA was extracted from the basal tissue of the first dorsal fin, subsequently by using a specific fish primer 700 bp of Cytochrome Oxidase C subunit 1 (CO1)was amplified in polymerase chain reaction (PCR) and sequenced. After comparison of Iranian Blenniid species CO1 sequence with sequence of 25 species from GenBank, was concluded that Iranian species are paraphyletically in the clade Parablenniini and sub-clads of Scartella and Parablennius. Since the relationship of Parablennius with other blenniids is the subject of many studies to resolve the conflicts and ambiguities among them we selected these genera to investigate the sister group relationship among them as well as other genera and clads. This is the first time that morphologic and molecular study of the two genera Parablennius and Scartella have been carried out in Iran. 2021-06-24T18:01:51Z 2021-06-24T18:01:51Z 2016 article TRUE 1026-1354 http://hdl.handle.net/1834/36916 fa http://www.ifro.ir application/pdf application/pdf 135-148 http://aquaticcommons.org/id/eprint/22104 18721 2018-02-08 03:34:25 22104 Iranian Fisheries Science Research Institute
institution UNESCO
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-aquadocs
tag biblioteca
region Europa del Oeste
libraryname Repositorio AQUADOCS
language Persian
topic Biology
Fisheries
Blenniidae
Paraphyletic
phylogeny
CO1
intertidal
sub tidal zones
Oman Sea
Parablennius cornutus
Parabelennius pilicorn
Scartella emarginata
species
DNA
Iran
Biology
Fisheries
Blenniidae
Paraphyletic
phylogeny
CO1
intertidal
sub tidal zones
Oman Sea
Parablennius cornutus
Parabelennius pilicorn
Scartella emarginata
species
DNA
Iran
spellingShingle Biology
Fisheries
Blenniidae
Paraphyletic
phylogeny
CO1
intertidal
sub tidal zones
Oman Sea
Parablennius cornutus
Parabelennius pilicorn
Scartella emarginata
species
DNA
Iran
Biology
Fisheries
Blenniidae
Paraphyletic
phylogeny
CO1
intertidal
sub tidal zones
Oman Sea
Parablennius cornutus
Parabelennius pilicorn
Scartella emarginata
species
DNA
Iran
Attaran-Fariman, G.
Estekani, S.
Ghasemzadeh, J.
The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
description In order to assess the phylogenetic relationships of three rare species belonging to tribe Parablenniini was carried out, along the Coast of Oman Sea. Based on the type of habitats the specimens of Blenniid were collected from three sampling sites in the intertidal zones by Scoop and hand net in low tide and in sub-tidal zones by scuba diving and hand from 3, 6, 9, and 12m depths in September to March 2013. Totally 30 fish samples collected and deposited to the lab for further investigation. Based on the available identification keys and morphometric characters three species of Parablennius cornutus, Parabelennius pilicorn, Scartella emarginata were identified. DNA was extracted from the basal tissue of the first dorsal fin, subsequently by using a specific fish primer 700 bp of Cytochrome Oxidase C subunit 1 (CO1)was amplified in polymerase chain reaction (PCR) and sequenced. After comparison of Iranian Blenniid species CO1 sequence with sequence of 25 species from GenBank, was concluded that Iranian species are paraphyletically in the clade Parablenniini and sub-clads of Scartella and Parablennius. Since the relationship of Parablennius with other blenniids is the subject of many studies to resolve the conflicts and ambiguities among them we selected these genera to investigate the sister group relationship among them as well as other genera and clads. This is the first time that morphologic and molecular study of the two genera Parablennius and Scartella have been carried out in Iran.
format article
topic_facet Biology
Fisheries
Blenniidae
Paraphyletic
phylogeny
CO1
intertidal
sub tidal zones
Oman Sea
Parablennius cornutus
Parabelennius pilicorn
Scartella emarginata
species
DNA
Iran
author Attaran-Fariman, G.
Estekani, S.
Ghasemzadeh, J.
author_facet Attaran-Fariman, G.
Estekani, S.
Ghasemzadeh, J.
author_sort Attaran-Fariman, G.
title The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
title_short The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
title_full The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
title_fullStr The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
title_full_unstemmed The first study of the phylogenetic relationships of three rare species of Blenniids (Fishes: Blenniidae) from Makoran Coast based on the gene sequencing of Cytochrome Oxidase 1
title_sort first study of the phylogenetic relationships of three rare species of blenniids (fishes: blenniidae) from makoran coast based on the gene sequencing of cytochrome oxidase 1
publishDate 2016
url http://hdl.handle.net/1834/36916
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