Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers

To determine the genetic diversity of Rutilus frisii kutum, 25 samples were collected from Gharesou and Gorgan-rud rivers in April 2008. The genomic DNA was extracted from the caudal fin using phenol- chloroform method and investigated with 10 microsatellite loci. All the 10 investigated loci were polymorphic and showed variability in the two populations of the rivers. The mean number of allele per locus at population level and the observed heterozygosity ranged from 4 to 13 and 0.22 to 1.00, respectively. The FST value between populations was 0.014 (P<0.05), and the analysis of genetic variation distribution indicated a very high within population variation (99%) while among population variation is low (1%). Highly significant deviation from hardy-Weinberg equilibrium was observed in both populations which can be attributed either to the presence of null alleles or to the genetic bottleneck. The results indicated a high level of genetic variation in this species and we concluded that there is more than one population of Rutilus frisii kutum in Golestan coastal waters.

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Bibliographic Details
Main Authors: Rezaei, M., Shabani, A., Shabanpour, B., Kashiri, H.
Format: Journal Contribution biblioteca
Language:Persian
Published: 2010
Subjects:Fins, Rutilus frisii kutum, Brackish, Variability, DNA, Genetic diversity, Biopolymorphism, Population number,
Online Access:http://hdl.handle.net/1834/11683
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spelling dig-aquadocs-1834-116832021-05-19T06:45:53Z Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers Rezaei, M. Shabani, A. Shabanpour, B. Kashiri, H. Fins Rutilus frisii kutum Brackish Variability DNA Genetic diversity Biopolymorphism Population number To determine the genetic diversity of Rutilus frisii kutum, 25 samples were collected from Gharesou and Gorgan-rud rivers in April 2008. The genomic DNA was extracted from the caudal fin using phenol- chloroform method and investigated with 10 microsatellite loci. All the 10 investigated loci were polymorphic and showed variability in the two populations of the rivers. The mean number of allele per locus at population level and the observed heterozygosity ranged from 4 to 13 and 0.22 to 1.00, respectively. The FST value between populations was 0.014 (P<0.05), and the analysis of genetic variation distribution indicated a very high within population variation (99%) while among population variation is low (1%). Highly significant deviation from hardy-Weinberg equilibrium was observed in both populations which can be attributed either to the presence of null alleles or to the genetic bottleneck. The results indicated a high level of genetic variation in this species and we concluded that there is more than one population of Rutilus frisii kutum in Golestan coastal waters. Published 2018-02-24T11:50:33Z 2018-02-24T11:50:33Z 2010 Journal Contribution Refereed 1026-1354 http://hdl.handle.net/1834/11683 fa http://isfj.areo.ir/ pp.151-156 Iran Caspian Sea
institution UNESCO
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-aquadocs
tag biblioteca
region Europa del Oeste
libraryname Repositorio AQUADOCS
language Persian
topic Fins
Rutilus frisii kutum
Brackish
Variability
DNA
Genetic diversity
Biopolymorphism
Population number
Fins
Rutilus frisii kutum
Brackish
Variability
DNA
Genetic diversity
Biopolymorphism
Population number
spellingShingle Fins
Rutilus frisii kutum
Brackish
Variability
DNA
Genetic diversity
Biopolymorphism
Population number
Fins
Rutilus frisii kutum
Brackish
Variability
DNA
Genetic diversity
Biopolymorphism
Population number
Rezaei, M.
Shabani, A.
Shabanpour, B.
Kashiri, H.
Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
description To determine the genetic diversity of Rutilus frisii kutum, 25 samples were collected from Gharesou and Gorgan-rud rivers in April 2008. The genomic DNA was extracted from the caudal fin using phenol- chloroform method and investigated with 10 microsatellite loci. All the 10 investigated loci were polymorphic and showed variability in the two populations of the rivers. The mean number of allele per locus at population level and the observed heterozygosity ranged from 4 to 13 and 0.22 to 1.00, respectively. The FST value between populations was 0.014 (P<0.05), and the analysis of genetic variation distribution indicated a very high within population variation (99%) while among population variation is low (1%). Highly significant deviation from hardy-Weinberg equilibrium was observed in both populations which can be attributed either to the presence of null alleles or to the genetic bottleneck. The results indicated a high level of genetic variation in this species and we concluded that there is more than one population of Rutilus frisii kutum in Golestan coastal waters.
format Journal Contribution
topic_facet Fins
Rutilus frisii kutum
Brackish
Variability
DNA
Genetic diversity
Biopolymorphism
Population number
author Rezaei, M.
Shabani, A.
Shabanpour, B.
Kashiri, H.
author_facet Rezaei, M.
Shabani, A.
Shabanpour, B.
Kashiri, H.
author_sort Rezaei, M.
title Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
title_short Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
title_full Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
title_fullStr Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
title_full_unstemmed Study of genetic structure of Rutilus frisii kutum in Golestan province coastal waters using microsatellite markers
title_sort study of genetic structure of rutilus frisii kutum in golestan province coastal waters using microsatellite markers
publishDate 2010
url http://hdl.handle.net/1834/11683
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AT shabania studyofgeneticstructureofrutilusfrisiikutumingolestanprovincecoastalwatersusingmicrosatellitemarkers
AT shabanpourb studyofgeneticstructureofrutilusfrisiikutumingolestanprovincecoastalwatersusingmicrosatellitemarkers
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