Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)

The main objective of this study was to assess genetic comparison of two migratory forms of Caspian trout Salmo trutta caspius namely fall-run and spring-run. Owing to the lack of information on its genetic differences, 5 microsatellite loci were used for 58 sample analyses. Genomic DNA was extracted from caudal fin using Roche DNA extraction kit and each PCR reaction was performed in a 25 µl reaction volume. Results revealed that the most allelic frequencies were observed in fall-runs of Caspian trout. The average observed and expected heterozygosity in fall-runs and spring-runs were 0.7719, 0.6108 and 0.4435, 0.5911, respectively. In both groups except Str543INRA in spring runs, all loci had deviation from HardyWeinberg equilibrium. Furthermore except Str543INRA in spring runs, expected heterozygosity in all loci was more than observed heterozygosity. In conclusion microsatellite loci polymorphism in this study reveals low genetic differentiation between fall-runs and spring-runs. In order to increase gene flow between Caspian trout populations of different rivers and to increase the production of these fishes, restoration of rivers habitats, as well as using more breeders originating from various rivers is highly recommended.

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Bibliographic Details
Main Authors: Shirangi, S. A., Kalbassi, M. R., Dorafshan, S.
Format: Journal Contribution biblioteca
Language:English
Published: 2011
Subjects:Polymorphism, Reveals, Salmo trutta caspius, Satellite, Genetic, Spring,
Online Access:http://hdl.handle.net/1834/10421
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spelling dig-aquadocs-1834-104212021-05-19T06:54:21Z Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870) Shirangi, S. A. Kalbassi, M. R. Dorafshan, S. Polymorphism Reveals Salmo trutta caspius Satellite Genetic Spring The main objective of this study was to assess genetic comparison of two migratory forms of Caspian trout Salmo trutta caspius namely fall-run and spring-run. Owing to the lack of information on its genetic differences, 5 microsatellite loci were used for 58 sample analyses. Genomic DNA was extracted from caudal fin using Roche DNA extraction kit and each PCR reaction was performed in a 25 µl reaction volume. Results revealed that the most allelic frequencies were observed in fall-runs of Caspian trout. The average observed and expected heterozygosity in fall-runs and spring-runs were 0.7719, 0.6108 and 0.4435, 0.5911, respectively. In both groups except Str543INRA in spring runs, all loci had deviation from HardyWeinberg equilibrium. Furthermore except Str543INRA in spring runs, expected heterozygosity in all loci was more than observed heterozygosity. In conclusion microsatellite loci polymorphism in this study reveals low genetic differentiation between fall-runs and spring-runs. In order to increase gene flow between Caspian trout populations of different rivers and to increase the production of these fishes, restoration of rivers habitats, as well as using more breeders originating from various rivers is highly recommended. Published 2017-11-20T13:09:46Z 2017-11-20T13:09:46Z 2011 Journal Contribution Refereed 1735-3033 http://hdl.handle.net/1834/10421 en pp.9-16 Iran Caspian Sea
institution UNESCO
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-aquadocs
tag biblioteca
region Europa del Oeste
libraryname Repositorio AQUADOCS
language English
topic Polymorphism
Reveals
Salmo trutta caspius
Satellite
Genetic
Spring
Polymorphism
Reveals
Salmo trutta caspius
Satellite
Genetic
Spring
spellingShingle Polymorphism
Reveals
Salmo trutta caspius
Satellite
Genetic
Spring
Polymorphism
Reveals
Salmo trutta caspius
Satellite
Genetic
Spring
Shirangi, S. A.
Kalbassi, M. R.
Dorafshan, S.
Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
description The main objective of this study was to assess genetic comparison of two migratory forms of Caspian trout Salmo trutta caspius namely fall-run and spring-run. Owing to the lack of information on its genetic differences, 5 microsatellite loci were used for 58 sample analyses. Genomic DNA was extracted from caudal fin using Roche DNA extraction kit and each PCR reaction was performed in a 25 µl reaction volume. Results revealed that the most allelic frequencies were observed in fall-runs of Caspian trout. The average observed and expected heterozygosity in fall-runs and spring-runs were 0.7719, 0.6108 and 0.4435, 0.5911, respectively. In both groups except Str543INRA in spring runs, all loci had deviation from HardyWeinberg equilibrium. Furthermore except Str543INRA in spring runs, expected heterozygosity in all loci was more than observed heterozygosity. In conclusion microsatellite loci polymorphism in this study reveals low genetic differentiation between fall-runs and spring-runs. In order to increase gene flow between Caspian trout populations of different rivers and to increase the production of these fishes, restoration of rivers habitats, as well as using more breeders originating from various rivers is highly recommended.
format Journal Contribution
topic_facet Polymorphism
Reveals
Salmo trutta caspius
Satellite
Genetic
Spring
author Shirangi, S. A.
Kalbassi, M. R.
Dorafshan, S.
author_facet Shirangi, S. A.
Kalbassi, M. R.
Dorafshan, S.
author_sort Shirangi, S. A.
title Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
title_short Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
title_full Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
title_fullStr Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
title_full_unstemmed Microsatellite Polymorphism Reveals Low Genetic Differentiation between Fall and Spring Migratory Forms of Endangered Caspian Trout, Salmo trutta caspius (Kessler, 1870)
title_sort microsatellite polymorphism reveals low genetic differentiation between fall and spring migratory forms of endangered caspian trout, salmo trutta caspius (kessler, 1870)
publishDate 2011
url http://hdl.handle.net/1834/10421
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AT kalbassimr microsatellitepolymorphismrevealslowgeneticdifferentiationbetweenfallandspringmigratoryformsofendangeredcaspiantroutsalmotruttacaspiuskessler1870
AT dorafshans microsatellitepolymorphismrevealslowgeneticdifferentiationbetweenfallandspringmigratoryformsofendangeredcaspiantroutsalmotruttacaspiuskessler1870
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