RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.

Background: In higher plants, the inhibition of photosynthetic capacity under drought is attributable to stomatal and non-stomatal (i.e., photochemical and biochemical) effects. In particular, a disruption of photosynthetic metabolism and Rubisco regulation can be observed. Several studies reported reduced expression of the RBCS genes, which encode the Rubisco small subunit, under water stress. Results: Expression of the RBCS1 gene was analysed in the allopolyploid context of C. arabica, which originates from a natural cross between the C. canephora and C. eugenioides species. Our study revealed the existence of two homeologous RBCS1 genes in C. arabica: one carried by the C. canephora sub-genome (called CaCc) and the other carried by the C. eugenioides sub-genome (called CaCe). Using specific primer pairs for each homeolog, expression studies revealed that CaCe was expressed in C. eugenioides and C. arabica but was undetectable in C. canephora. On the other hand, CaCc was expressed in C. canephora but almost completely silenced in non-introgressed ("pure?) genotypes of C. arabica. However, enhanced CaCc expression was observed in most C. arabica cultivars with introgressed C. canephora genome. In addition, total RBCS1 expression was higher for C. arabica cultivars that had recently introgressed C. canephora genome than for ?pure? cultivars. For both species, water stress led to an important decrease in the abundance of RBCS1 transcripts. This was observed for plants grown in either greenhouse or field conditions under severe or moderate drought. However, this reduction of RBCS1 gene expression was not accompanied by a decrease in the corresponding protein in the leaves of C. canephora subjected to water withdrawal. In that case, the amount of RBCS1 was even higher under drought than under unstressed (irrigated) conditions, which suggests great stability of RBCS1 under adverse water conditions. On the other hand, for C. arabica, high nocturnal expression of RBCS1 could also explain the accumulation of the RBCS1 protein under water stress. Altogether, the results presented here suggest that the content of RBCS was not responsible for the loss of photosynthetic capacity that is commonly observed in water-stressed coffee plants. Conclusion: We showed that the CaCe homeolog was expressed in C. eugenioides and non-introgressed ("pure?) genotypes of C. arabica but that it was undetectable in C. canephora. On the other hand, the CaCc homeolog was expressed in C. canephora but highly repressed in C. arabica. Expression of the CaCc homeolog was enhanced in C. arabica cultivars that experienced recent introgression with C. canephora. For both C. canephora and C. arabica species, total RBCS1 gene expression was highly reduced with WS. Unexpectedly, the accumulation of RBCS1 protein was observed in the leaves of C. canephora under WS, possibly coming from nocturnal RBCS1 expression. These results suggest that the increase in the amount of RBCS1 protein could contribute to the antioxidative function of photorespiration in water-stressed coffee plants.

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Main Authors: MARRACCINI, P., FREIRE, L. P., ALVES, G. S. C., VIEIRA, N. G., VINECKY, F., ELBELT, S., RAMOS, H. J. O., MONTAGNON, C., VIEIRA, L. G. E., LEROY, T., POT, D., SILVA, V. A., RODRIGUES, G. C., ANDRADE, A. C.
Other Authors: PIERRE MARRACCINI, CENARGEN, CIRAD; LUCIANA P. FREIRE, CENARGEN; GABRIEL S. C. ALVES, CENARGEN; NATALIA G. VIEIRA, CENARGEN; FELIPE VINECKY, CENARGEN; SONIA ELBELT, CENARGEN; HUMBERTO J. O. RAMOS, IAPAR, UFV; CHRISTOPHE MONTAGNON, CIRAD; LUIZ G. E. VIEIRA, IAPAR; THIERRY LEROY, CIRAD; DAVID POT, CIRAD; VÂNIA A. SILVA, EPAMIG; GUSTAVO COSTA RODRIGUES, CNPTIA; ALAN CARVALHO ANDRADE, CENARGEN.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2011-11-10
Subjects:Expressão gênica, Sequência genética., Coffea Arábica, Café, Coffea Canephora, Genética Molecular., Gene expression, Molecular genetics.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/905604
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language English
eng
topic Expressão gênica
Sequência genética.
Coffea Arábica
Café
Coffea Canephora
Genética Molecular.
Gene expression
Molecular genetics.
Expressão gênica
Sequência genética.
Coffea Arábica
Café
Coffea Canephora
Genética Molecular.
Gene expression
Molecular genetics.
spellingShingle Expressão gênica
Sequência genética.
Coffea Arábica
Café
Coffea Canephora
Genética Molecular.
Gene expression
Molecular genetics.
Expressão gênica
Sequência genética.
Coffea Arábica
Café
Coffea Canephora
Genética Molecular.
Gene expression
Molecular genetics.
MARRACCINI, P.
FREIRE, L. P.
ALVES, G. S. C.
VIEIRA, N. G.
VINECKY, F.
ELBELT, S.
RAMOS, H. J. O.
MONTAGNON, C.
VIEIRA, L. G. E.
LEROY, T.
POT, D.
SILVA, V. A.
RODRIGUES, G. C.
ANDRADE, A. C.
RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
description Background: In higher plants, the inhibition of photosynthetic capacity under drought is attributable to stomatal and non-stomatal (i.e., photochemical and biochemical) effects. In particular, a disruption of photosynthetic metabolism and Rubisco regulation can be observed. Several studies reported reduced expression of the RBCS genes, which encode the Rubisco small subunit, under water stress. Results: Expression of the RBCS1 gene was analysed in the allopolyploid context of C. arabica, which originates from a natural cross between the C. canephora and C. eugenioides species. Our study revealed the existence of two homeologous RBCS1 genes in C. arabica: one carried by the C. canephora sub-genome (called CaCc) and the other carried by the C. eugenioides sub-genome (called CaCe). Using specific primer pairs for each homeolog, expression studies revealed that CaCe was expressed in C. eugenioides and C. arabica but was undetectable in C. canephora. On the other hand, CaCc was expressed in C. canephora but almost completely silenced in non-introgressed ("pure?) genotypes of C. arabica. However, enhanced CaCc expression was observed in most C. arabica cultivars with introgressed C. canephora genome. In addition, total RBCS1 expression was higher for C. arabica cultivars that had recently introgressed C. canephora genome than for ?pure? cultivars. For both species, water stress led to an important decrease in the abundance of RBCS1 transcripts. This was observed for plants grown in either greenhouse or field conditions under severe or moderate drought. However, this reduction of RBCS1 gene expression was not accompanied by a decrease in the corresponding protein in the leaves of C. canephora subjected to water withdrawal. In that case, the amount of RBCS1 was even higher under drought than under unstressed (irrigated) conditions, which suggests great stability of RBCS1 under adverse water conditions. On the other hand, for C. arabica, high nocturnal expression of RBCS1 could also explain the accumulation of the RBCS1 protein under water stress. Altogether, the results presented here suggest that the content of RBCS was not responsible for the loss of photosynthetic capacity that is commonly observed in water-stressed coffee plants. Conclusion: We showed that the CaCe homeolog was expressed in C. eugenioides and non-introgressed ("pure?) genotypes of C. arabica but that it was undetectable in C. canephora. On the other hand, the CaCc homeolog was expressed in C. canephora but highly repressed in C. arabica. Expression of the CaCc homeolog was enhanced in C. arabica cultivars that experienced recent introgression with C. canephora. For both C. canephora and C. arabica species, total RBCS1 gene expression was highly reduced with WS. Unexpectedly, the accumulation of RBCS1 protein was observed in the leaves of C. canephora under WS, possibly coming from nocturnal RBCS1 expression. These results suggest that the increase in the amount of RBCS1 protein could contribute to the antioxidative function of photorespiration in water-stressed coffee plants.
author2 PIERRE MARRACCINI, CENARGEN, CIRAD; LUCIANA P. FREIRE, CENARGEN; GABRIEL S. C. ALVES, CENARGEN; NATALIA G. VIEIRA, CENARGEN; FELIPE VINECKY, CENARGEN; SONIA ELBELT, CENARGEN; HUMBERTO J. O. RAMOS, IAPAR, UFV; CHRISTOPHE MONTAGNON, CIRAD; LUIZ G. E. VIEIRA, IAPAR; THIERRY LEROY, CIRAD; DAVID POT, CIRAD; VÂNIA A. SILVA, EPAMIG; GUSTAVO COSTA RODRIGUES, CNPTIA; ALAN CARVALHO ANDRADE, CENARGEN.
author_facet PIERRE MARRACCINI, CENARGEN, CIRAD; LUCIANA P. FREIRE, CENARGEN; GABRIEL S. C. ALVES, CENARGEN; NATALIA G. VIEIRA, CENARGEN; FELIPE VINECKY, CENARGEN; SONIA ELBELT, CENARGEN; HUMBERTO J. O. RAMOS, IAPAR, UFV; CHRISTOPHE MONTAGNON, CIRAD; LUIZ G. E. VIEIRA, IAPAR; THIERRY LEROY, CIRAD; DAVID POT, CIRAD; VÂNIA A. SILVA, EPAMIG; GUSTAVO COSTA RODRIGUES, CNPTIA; ALAN CARVALHO ANDRADE, CENARGEN.
MARRACCINI, P.
FREIRE, L. P.
ALVES, G. S. C.
VIEIRA, N. G.
VINECKY, F.
ELBELT, S.
RAMOS, H. J. O.
MONTAGNON, C.
VIEIRA, L. G. E.
LEROY, T.
POT, D.
SILVA, V. A.
RODRIGUES, G. C.
ANDRADE, A. C.
format Artigo de periódico
topic_facet Expressão gênica
Sequência genética.
Coffea Arábica
Café
Coffea Canephora
Genética Molecular.
Gene expression
Molecular genetics.
author MARRACCINI, P.
FREIRE, L. P.
ALVES, G. S. C.
VIEIRA, N. G.
VINECKY, F.
ELBELT, S.
RAMOS, H. J. O.
MONTAGNON, C.
VIEIRA, L. G. E.
LEROY, T.
POT, D.
SILVA, V. A.
RODRIGUES, G. C.
ANDRADE, A. C.
author_sort MARRACCINI, P.
title RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
title_short RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
title_full RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
title_fullStr RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
title_full_unstemmed RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
title_sort rbcs1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress.
publishDate 2011-11-10
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/905604
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spelling dig-alice-doc-9056042017-08-16T00:08:25Z RBCS1 expression in coffee: coffea orthologs, coffea arabica homeologs, and expression variability between genotypes and under drought stress. MARRACCINI, P. FREIRE, L. P. ALVES, G. S. C. VIEIRA, N. G. VINECKY, F. ELBELT, S. RAMOS, H. J. O. MONTAGNON, C. VIEIRA, L. G. E. LEROY, T. POT, D. SILVA, V. A. RODRIGUES, G. C. ANDRADE, A. C. PIERRE MARRACCINI, CENARGEN, CIRAD; LUCIANA P. FREIRE, CENARGEN; GABRIEL S. C. ALVES, CENARGEN; NATALIA G. VIEIRA, CENARGEN; FELIPE VINECKY, CENARGEN; SONIA ELBELT, CENARGEN; HUMBERTO J. O. RAMOS, IAPAR, UFV; CHRISTOPHE MONTAGNON, CIRAD; LUIZ G. E. VIEIRA, IAPAR; THIERRY LEROY, CIRAD; DAVID POT, CIRAD; VÂNIA A. SILVA, EPAMIG; GUSTAVO COSTA RODRIGUES, CNPTIA; ALAN CARVALHO ANDRADE, CENARGEN. Expressão gênica Sequência genética. Coffea Arábica Café Coffea Canephora Genética Molecular. Gene expression Molecular genetics. Background: In higher plants, the inhibition of photosynthetic capacity under drought is attributable to stomatal and non-stomatal (i.e., photochemical and biochemical) effects. In particular, a disruption of photosynthetic metabolism and Rubisco regulation can be observed. Several studies reported reduced expression of the RBCS genes, which encode the Rubisco small subunit, under water stress. Results: Expression of the RBCS1 gene was analysed in the allopolyploid context of C. arabica, which originates from a natural cross between the C. canephora and C. eugenioides species. Our study revealed the existence of two homeologous RBCS1 genes in C. arabica: one carried by the C. canephora sub-genome (called CaCc) and the other carried by the C. eugenioides sub-genome (called CaCe). Using specific primer pairs for each homeolog, expression studies revealed that CaCe was expressed in C. eugenioides and C. arabica but was undetectable in C. canephora. On the other hand, CaCc was expressed in C. canephora but almost completely silenced in non-introgressed ("pure?) genotypes of C. arabica. However, enhanced CaCc expression was observed in most C. arabica cultivars with introgressed C. canephora genome. In addition, total RBCS1 expression was higher for C. arabica cultivars that had recently introgressed C. canephora genome than for ?pure? cultivars. For both species, water stress led to an important decrease in the abundance of RBCS1 transcripts. This was observed for plants grown in either greenhouse or field conditions under severe or moderate drought. However, this reduction of RBCS1 gene expression was not accompanied by a decrease in the corresponding protein in the leaves of C. canephora subjected to water withdrawal. In that case, the amount of RBCS1 was even higher under drought than under unstressed (irrigated) conditions, which suggests great stability of RBCS1 under adverse water conditions. On the other hand, for C. arabica, high nocturnal expression of RBCS1 could also explain the accumulation of the RBCS1 protein under water stress. Altogether, the results presented here suggest that the content of RBCS was not responsible for the loss of photosynthetic capacity that is commonly observed in water-stressed coffee plants. Conclusion: We showed that the CaCe homeolog was expressed in C. eugenioides and non-introgressed ("pure?) genotypes of C. arabica but that it was undetectable in C. canephora. On the other hand, the CaCc homeolog was expressed in C. canephora but highly repressed in C. arabica. Expression of the CaCc homeolog was enhanced in C. arabica cultivars that experienced recent introgression with C. canephora. For both C. canephora and C. arabica species, total RBCS1 gene expression was highly reduced with WS. Unexpectedly, the accumulation of RBCS1 protein was observed in the leaves of C. canephora under WS, possibly coming from nocturnal RBCS1 expression. These results suggest that the increase in the amount of RBCS1 protein could contribute to the antioxidative function of photorespiration in water-stressed coffee plants. 2011-11-10T11:11:11Z 2011-11-10T11:11:11Z 2011-11-10 2011 2012-01-05T11:11:11Z Artigo de periódico BMC Plant Biology, London, v. 11, n. 85, 2011. http://www.alice.cnptia.embrapa.br/alice/handle/doc/905604 10.1186/1471-2229-11-85 en eng openAccess 23 p.