Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.

Defensin, thionin and lipid transfer protein (LTP) gene families, which antimicrobial activity has an attractive use in protein engineering and transgenic production of agronomically important plants, have been here functionally reviewed. Also, a transcriptional overview of plant SuperSAGE libraries and analysis of 26 bp tags possibly annotated for those families are presented. Tags differentially expressed (p < 0.05) or constitutively transcribed were identified from leaves or roots from SuperSAGE libraries from important Brazilian plant crops [cowpea (Vigna unguiculata (L.) Walp.), soybean (Glycine max (L.) Merr.) and modern sugarcane hybrids (Saccharum spp.)] submitted to abiotic [salt (100 mM NaCl) or drought] or biotic stresses [fungus inoculation (Phakopsora pachyrhizi; Asiatic Soybean Rust phytopathogen)]. The diverse transcriptional patterns observed, probably related to the variable range of targets and functions involved, could be the first step to unravel the antimicrobial peptide world and the plant stress response relationship. Moreover, SuperSAGE opens the opportunity to find some SNPs or even rare transcripts that could be important on plant stress resistance mechanisms. Putative defensin or LTPs revealed by SuperSAGE following a specific plant treatment or physiological condition could be useful for future use in genetic improvement of plants.

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Main Authors: KIDO, E. A., PANDOLFI, V., HOULLOU-KIDO, L. M., ANDRADE, F. C., MARCELINO, F. C., NEPOMUCENO, A. L., ABDELNOOR, R. V., BURNQUIST, W. L., BENKO-ISEPPON, A. M.
Other Authors: UFPE; UFPE; CETENE; F. C. ANDRADE, Universidade Federal de Pernambuco; FRANCISMAR CORREA MARCELINO, CNPSO; ALEXANDRE LIMA NEPOMUCENO, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; CTC; UFPE.
Format: Separatas biblioteca
Language:English
eng
Published: 2011-02-02
Subjects:Expressão gênica, PR proteins, Defensin, Thionin, Lipid transfer protein., Biotecnologia, Soja, Feijão, Cana de açúcar, Genoma, Stress., Soybeans, Agricultural biotechnology, Genomics, Cowpeas, Sugarcane,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/875446
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spelling dig-alice-doc-8754462017-08-16T00:55:44Z Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review. KIDO, E. A. PANDOLFI, V. HOULLOU-KIDO, L. M. ANDRADE, F. C. MARCELINO, F. C. NEPOMUCENO, A. L. ABDELNOOR, R. V. BURNQUIST, W. L. BENKO-ISEPPON, A. M. UFPE; UFPE; CETENE; F. C. ANDRADE, Universidade Federal de Pernambuco; FRANCISMAR CORREA MARCELINO, CNPSO; ALEXANDRE LIMA NEPOMUCENO, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; CTC; UFPE. Expressão gênica PR proteins Defensin Thionin Lipid transfer protein. Biotecnologia Soja Feijão Cana de açúcar Genoma Stress. Soybeans Agricultural biotechnology Genomics Cowpeas Sugarcane Defensin, thionin and lipid transfer protein (LTP) gene families, which antimicrobial activity has an attractive use in protein engineering and transgenic production of agronomically important plants, have been here functionally reviewed. Also, a transcriptional overview of plant SuperSAGE libraries and analysis of 26 bp tags possibly annotated for those families are presented. Tags differentially expressed (p < 0.05) or constitutively transcribed were identified from leaves or roots from SuperSAGE libraries from important Brazilian plant crops [cowpea (Vigna unguiculata (L.) Walp.), soybean (Glycine max (L.) Merr.) and modern sugarcane hybrids (Saccharum spp.)] submitted to abiotic [salt (100 mM NaCl) or drought] or biotic stresses [fungus inoculation (Phakopsora pachyrhizi; Asiatic Soybean Rust phytopathogen)]. The diverse transcriptional patterns observed, probably related to the variable range of targets and functions involved, could be the first step to unravel the antimicrobial peptide world and the plant stress response relationship. Moreover, SuperSAGE opens the opportunity to find some SNPs or even rare transcripts that could be important on plant stress resistance mechanisms. Putative defensin or LTPs revealed by SuperSAGE following a specific plant treatment or physiological condition could be useful for future use in genetic improvement of plants. 2014-02-28T23:23:49Z 2014-02-28T23:23:49Z 2011-02-02 2010 2014-02-28T23:23:49Z Separatas Current Protein & Peptide Science, v. 11, n. 3, p. 220-230, May 2010. http://www.alice.cnptia.embrapa.br/alice/handle/doc/875446 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Expressão gênica
PR proteins
Defensin
Thionin
Lipid transfer protein.
Biotecnologia
Soja
Feijão
Cana de açúcar
Genoma
Stress.
Soybeans
Agricultural biotechnology
Genomics
Cowpeas
Sugarcane
Expressão gênica
PR proteins
Defensin
Thionin
Lipid transfer protein.
Biotecnologia
Soja
Feijão
Cana de açúcar
Genoma
Stress.
Soybeans
Agricultural biotechnology
Genomics
Cowpeas
Sugarcane
spellingShingle Expressão gênica
PR proteins
Defensin
Thionin
Lipid transfer protein.
Biotecnologia
Soja
Feijão
Cana de açúcar
Genoma
Stress.
Soybeans
Agricultural biotechnology
Genomics
Cowpeas
Sugarcane
Expressão gênica
PR proteins
Defensin
Thionin
Lipid transfer protein.
Biotecnologia
Soja
Feijão
Cana de açúcar
Genoma
Stress.
Soybeans
Agricultural biotechnology
Genomics
Cowpeas
Sugarcane
KIDO, E. A.
PANDOLFI, V.
HOULLOU-KIDO, L. M.
ANDRADE, F. C.
MARCELINO, F. C.
NEPOMUCENO, A. L.
ABDELNOOR, R. V.
BURNQUIST, W. L.
BENKO-ISEPPON, A. M.
Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
description Defensin, thionin and lipid transfer protein (LTP) gene families, which antimicrobial activity has an attractive use in protein engineering and transgenic production of agronomically important plants, have been here functionally reviewed. Also, a transcriptional overview of plant SuperSAGE libraries and analysis of 26 bp tags possibly annotated for those families are presented. Tags differentially expressed (p < 0.05) or constitutively transcribed were identified from leaves or roots from SuperSAGE libraries from important Brazilian plant crops [cowpea (Vigna unguiculata (L.) Walp.), soybean (Glycine max (L.) Merr.) and modern sugarcane hybrids (Saccharum spp.)] submitted to abiotic [salt (100 mM NaCl) or drought] or biotic stresses [fungus inoculation (Phakopsora pachyrhizi; Asiatic Soybean Rust phytopathogen)]. The diverse transcriptional patterns observed, probably related to the variable range of targets and functions involved, could be the first step to unravel the antimicrobial peptide world and the plant stress response relationship. Moreover, SuperSAGE opens the opportunity to find some SNPs or even rare transcripts that could be important on plant stress resistance mechanisms. Putative defensin or LTPs revealed by SuperSAGE following a specific plant treatment or physiological condition could be useful for future use in genetic improvement of plants.
author2 UFPE; UFPE; CETENE; F. C. ANDRADE, Universidade Federal de Pernambuco; FRANCISMAR CORREA MARCELINO, CNPSO; ALEXANDRE LIMA NEPOMUCENO, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; CTC; UFPE.
author_facet UFPE; UFPE; CETENE; F. C. ANDRADE, Universidade Federal de Pernambuco; FRANCISMAR CORREA MARCELINO, CNPSO; ALEXANDRE LIMA NEPOMUCENO, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; CTC; UFPE.
KIDO, E. A.
PANDOLFI, V.
HOULLOU-KIDO, L. M.
ANDRADE, F. C.
MARCELINO, F. C.
NEPOMUCENO, A. L.
ABDELNOOR, R. V.
BURNQUIST, W. L.
BENKO-ISEPPON, A. M.
format Separatas
topic_facet Expressão gênica
PR proteins
Defensin
Thionin
Lipid transfer protein.
Biotecnologia
Soja
Feijão
Cana de açúcar
Genoma
Stress.
Soybeans
Agricultural biotechnology
Genomics
Cowpeas
Sugarcane
author KIDO, E. A.
PANDOLFI, V.
HOULLOU-KIDO, L. M.
ANDRADE, F. C.
MARCELINO, F. C.
NEPOMUCENO, A. L.
ABDELNOOR, R. V.
BURNQUIST, W. L.
BENKO-ISEPPON, A. M.
author_sort KIDO, E. A.
title Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
title_short Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
title_full Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
title_fullStr Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
title_full_unstemmed Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review.
title_sort plant antimicrobial peptides: an overview of supersage transcriptional profile and a functional review.
publishDate 2011-02-02
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/875446
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