Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.

The lack of informativity of samples from heterozygotic individuals is one of the hindrances in the mapping of quantitative trait loci of outbred populations, since it is not normally possible to identify the origin of each allele. One way to include these individuals in analyses would be to genotype their endosperm, considering that heterozygote (Aa) has AAa endosperm, when the female genitor donates the A or a allele, respectivelly. We used semiquantitative polymerase chain reaction to determine allele dosages in DNA mixtures, by simulating the observed conditions for endospermic tissue. Semiquantitative polymerase chain reaction on agarose gels, along with regression analysis, allowed differentiation of the samples according to the amount of DNA. This type of information will help decrease the number of non-informative individuals in quantitative trait locus mapping of outbred populations, thereby increasing mapping accuracy.

Saved in:
Bibliographic Details
Main Authors: MARTINS, F. A., CARNEIRO, P. C. S., GUIMARAES, C. T., MAGALHAES, J. V. D., CARNEIRO, J. E. S., CRUZ, C. D.
Other Authors: Francielle Alline Martins, Universidade Federal de Viçosa; Pedro Crescêncio Souza Carneiro, Universidade Federal de Viçosa; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; JURANDIR VIEIRA DE MAGALHAES, CNPMS; José Eustáquio de Souza Caneiro, Universidade Federal de Viçosa; Cosme Damião Cruz, Universidade Federal de Viçosa.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2011-04-10T11:11:11Z
Subjects:Milho, Zea mays, Genética vegetal,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/513749
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-alice-doc-513749
record_format koha
spelling dig-alice-doc-5137492017-08-15T23:37:32Z Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction. MARTINS, F. A. CARNEIRO, P. C. S. GUIMARAES, C. T. MAGALHAES, J. V. D. CARNEIRO, J. E. S. CRUZ, C. D. Francielle Alline Martins, Universidade Federal de Viçosa; Pedro Crescêncio Souza Carneiro, Universidade Federal de Viçosa; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; JURANDIR VIEIRA DE MAGALHAES, CNPMS; José Eustáquio de Souza Caneiro, Universidade Federal de Viçosa; Cosme Damião Cruz, Universidade Federal de Viçosa. Milho Zea mays Genética vegetal The lack of informativity of samples from heterozygotic individuals is one of the hindrances in the mapping of quantitative trait loci of outbred populations, since it is not normally possible to identify the origin of each allele. One way to include these individuals in analyses would be to genotype their endosperm, considering that heterozygote (Aa) has AAa endosperm, when the female genitor donates the A or a allele, respectivelly. We used semiquantitative polymerase chain reaction to determine allele dosages in DNA mixtures, by simulating the observed conditions for endospermic tissue. Semiquantitative polymerase chain reaction on agarose gels, along with regression analysis, allowed differentiation of the samples according to the amount of DNA. This type of information will help decrease the number of non-informative individuals in quantitative trait locus mapping of outbred populations, thereby increasing mapping accuracy. 2011-04-10T11:11:11Z 2011-04-10T11:11:11Z 2011-04-10T11:11:11Z 2011-04-10T11:11:11Z 2009-10-14 2009 2018-07-13T11:11:11Z Artigo de periódico Genetics and Molecular Research, Ribeirão Preto, v. 8, n. 1, p. 319-327, 2009. http://www.alice.cnptia.embrapa.br/alice/handle/doc/513749 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Milho
Zea mays
Genética vegetal
Milho
Zea mays
Genética vegetal
spellingShingle Milho
Zea mays
Genética vegetal
Milho
Zea mays
Genética vegetal
MARTINS, F. A.
CARNEIRO, P. C. S.
GUIMARAES, C. T.
MAGALHAES, J. V. D.
CARNEIRO, J. E. S.
CRUZ, C. D.
Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
description The lack of informativity of samples from heterozygotic individuals is one of the hindrances in the mapping of quantitative trait loci of outbred populations, since it is not normally possible to identify the origin of each allele. One way to include these individuals in analyses would be to genotype their endosperm, considering that heterozygote (Aa) has AAa endosperm, when the female genitor donates the A or a allele, respectivelly. We used semiquantitative polymerase chain reaction to determine allele dosages in DNA mixtures, by simulating the observed conditions for endospermic tissue. Semiquantitative polymerase chain reaction on agarose gels, along with regression analysis, allowed differentiation of the samples according to the amount of DNA. This type of information will help decrease the number of non-informative individuals in quantitative trait locus mapping of outbred populations, thereby increasing mapping accuracy.
author2 Francielle Alline Martins, Universidade Federal de Viçosa; Pedro Crescêncio Souza Carneiro, Universidade Federal de Viçosa; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; JURANDIR VIEIRA DE MAGALHAES, CNPMS; José Eustáquio de Souza Caneiro, Universidade Federal de Viçosa; Cosme Damião Cruz, Universidade Federal de Viçosa.
author_facet Francielle Alline Martins, Universidade Federal de Viçosa; Pedro Crescêncio Souza Carneiro, Universidade Federal de Viçosa; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; JURANDIR VIEIRA DE MAGALHAES, CNPMS; José Eustáquio de Souza Caneiro, Universidade Federal de Viçosa; Cosme Damião Cruz, Universidade Federal de Viçosa.
MARTINS, F. A.
CARNEIRO, P. C. S.
GUIMARAES, C. T.
MAGALHAES, J. V. D.
CARNEIRO, J. E. S.
CRUZ, C. D.
format Artigo de periódico
topic_facet Milho
Zea mays
Genética vegetal
author MARTINS, F. A.
CARNEIRO, P. C. S.
GUIMARAES, C. T.
MAGALHAES, J. V. D.
CARNEIRO, J. E. S.
CRUZ, C. D.
author_sort MARTINS, F. A.
title Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
title_short Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
title_full Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
title_fullStr Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
title_full_unstemmed Distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
title_sort distinction between plant samples according to allele dosage by semiquantitative polymerase chain reaction.
publishDate 2011-04-10T11:11:11Z
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/513749
work_keys_str_mv AT martinsfa distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
AT carneiropcs distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
AT guimaraesct distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
AT magalhaesjvd distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
AT carneirojes distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
AT cruzcd distinctionbetweenplantsamplesaccordingtoalleledosagebysemiquantitativepolymerasechainreaction
_version_ 1756016989848993792