Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.

A tropical Brazilian soil (Cerrado) was planted with four cultivars of maize (CMS04, CMS11, CMS22 and CMS36) and the genetic diversity of the Paenibacillus polymyxa populations present in their rhizospheres was determined after 90 days of sowing. For that, a total of 67 isolates were identified as R polymyxa by classical biochemical tests and were analyzed for DNA polymorphism with the randomly amplified polymorphic DNA (RAPD) and amplification of repetitive DNA sequences (rep) methods. The amplification patterns obtained using three arbitrary primers and the primer BOXA1R were used separately to construct dendrograms based on the unweighted pair groups method with arithmetic means (UPGMA). Fifty-four genotypic groups were formed when data from different PCR amplification were combined, showing a high level of genetic polymorphism among P. polymyxa strains. A dendrogram based also on combined PCR data, followed by cluster analysis with minimum-variance criteria (Ward) and Euclidean distance, showed that P. polymyxa strains could be divided into two main clusters. One cluster was formed predominantly by strains from maize cultivars CMS04 and CMS36, while the other cluster was formed predominantly by strains of maize cultivars CMS11 and CMS22. Multivariate analysis of variance (MANOVA) allowed the correlation between the genetic structure of P. polymyxa populations and the different cultivars of maize to be studied. The results showed that the strains isolated from the rhizospheres of the different maize cultivars were significantly different. (C) 2002 Elsevier Science B. V. Alls rights reserved.

Saved in:
Bibliographic Details
Main Authors: MOTA, F. F. da, NOBREGA, F. F., MARRIEL, I. E., PAIVA, E., SELDIN, L.
Other Authors: IVANILDO EVODIO MARRIEL, CNPMS.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2002-08-29
Subjects:Diversidade genetica., Bactéria, Cerrado, Milho, Rizosfera.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/485544
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-alice-doc-485544
record_format koha
spelling dig-alice-doc-4855442017-08-16T04:30:46Z Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil. MOTA, F. F. da NOBREGA, F. F. MARRIEL, I. E. PAIVA, E. SELDIN, L. IVANILDO EVODIO MARRIEL, CNPMS. Diversidade genetica. Bactéria Cerrado Milho Rizosfera. A tropical Brazilian soil (Cerrado) was planted with four cultivars of maize (CMS04, CMS11, CMS22 and CMS36) and the genetic diversity of the Paenibacillus polymyxa populations present in their rhizospheres was determined after 90 days of sowing. For that, a total of 67 isolates were identified as R polymyxa by classical biochemical tests and were analyzed for DNA polymorphism with the randomly amplified polymorphic DNA (RAPD) and amplification of repetitive DNA sequences (rep) methods. The amplification patterns obtained using three arbitrary primers and the primer BOXA1R were used separately to construct dendrograms based on the unweighted pair groups method with arithmetic means (UPGMA). Fifty-four genotypic groups were formed when data from different PCR amplification were combined, showing a high level of genetic polymorphism among P. polymyxa strains. A dendrogram based also on combined PCR data, followed by cluster analysis with minimum-variance criteria (Ward) and Euclidean distance, showed that P. polymyxa strains could be divided into two main clusters. One cluster was formed predominantly by strains from maize cultivars CMS04 and CMS36, while the other cluster was formed predominantly by strains of maize cultivars CMS11 and CMS22. Multivariate analysis of variance (MANOVA) allowed the correlation between the genetic structure of P. polymyxa populations and the different cultivars of maize to be studied. The results showed that the strains isolated from the rhizospheres of the different maize cultivars were significantly different. (C) 2002 Elsevier Science B. V. Alls rights reserved. 2017-06-06T23:48:11Z 2017-06-06T23:48:11Z 2002-08-29 2002 2018-06-07T11:11:11Z Artigo de periódico Applied Soil Ecology, Amsterdam, v. 20, n. 2, p. 119-132, 2002. http://www.alice.cnptia.embrapa.br/alice/handle/doc/485544 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Diversidade genetica.
Bactéria
Cerrado
Milho
Rizosfera.
Diversidade genetica.
Bactéria
Cerrado
Milho
Rizosfera.
spellingShingle Diversidade genetica.
Bactéria
Cerrado
Milho
Rizosfera.
Diversidade genetica.
Bactéria
Cerrado
Milho
Rizosfera.
MOTA, F. F. da
NOBREGA, F. F.
MARRIEL, I. E.
PAIVA, E.
SELDIN, L.
Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
description A tropical Brazilian soil (Cerrado) was planted with four cultivars of maize (CMS04, CMS11, CMS22 and CMS36) and the genetic diversity of the Paenibacillus polymyxa populations present in their rhizospheres was determined after 90 days of sowing. For that, a total of 67 isolates were identified as R polymyxa by classical biochemical tests and were analyzed for DNA polymorphism with the randomly amplified polymorphic DNA (RAPD) and amplification of repetitive DNA sequences (rep) methods. The amplification patterns obtained using three arbitrary primers and the primer BOXA1R were used separately to construct dendrograms based on the unweighted pair groups method with arithmetic means (UPGMA). Fifty-four genotypic groups were formed when data from different PCR amplification were combined, showing a high level of genetic polymorphism among P. polymyxa strains. A dendrogram based also on combined PCR data, followed by cluster analysis with minimum-variance criteria (Ward) and Euclidean distance, showed that P. polymyxa strains could be divided into two main clusters. One cluster was formed predominantly by strains from maize cultivars CMS04 and CMS36, while the other cluster was formed predominantly by strains of maize cultivars CMS11 and CMS22. Multivariate analysis of variance (MANOVA) allowed the correlation between the genetic structure of P. polymyxa populations and the different cultivars of maize to be studied. The results showed that the strains isolated from the rhizospheres of the different maize cultivars were significantly different. (C) 2002 Elsevier Science B. V. Alls rights reserved.
author2 IVANILDO EVODIO MARRIEL, CNPMS.
author_facet IVANILDO EVODIO MARRIEL, CNPMS.
MOTA, F. F. da
NOBREGA, F. F.
MARRIEL, I. E.
PAIVA, E.
SELDIN, L.
format Artigo de periódico
topic_facet Diversidade genetica.
Bactéria
Cerrado
Milho
Rizosfera.
author MOTA, F. F. da
NOBREGA, F. F.
MARRIEL, I. E.
PAIVA, E.
SELDIN, L.
author_sort MOTA, F. F. da
title Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
title_short Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
title_full Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
title_fullStr Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
title_full_unstemmed Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) planted in cerrado soil.
title_sort genetic diversity of paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (zea mays) planted in cerrado soil.
publishDate 2002-08-29
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/485544
work_keys_str_mv AT motaffda geneticdiversityofpaenibacilluspolymyxapopulationsisolatedfromtherhizosphereoffourcultivarsofmaizezeamaysplantedincerradosoil
AT nobregaff geneticdiversityofpaenibacilluspolymyxapopulationsisolatedfromtherhizosphereoffourcultivarsofmaizezeamaysplantedincerradosoil
AT marrielie geneticdiversityofpaenibacilluspolymyxapopulationsisolatedfromtherhizosphereoffourcultivarsofmaizezeamaysplantedincerradosoil
AT paivae geneticdiversityofpaenibacilluspolymyxapopulationsisolatedfromtherhizosphereoffourcultivarsofmaizezeamaysplantedincerradosoil
AT seldinl geneticdiversityofpaenibacilluspolymyxapopulationsisolatedfromtherhizosphereoffourcultivarsofmaizezeamaysplantedincerradosoil
_version_ 1756023517728473088