Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.

Abstract. Background. On tropical regions, phosphorus (P) fxation onto aluminum and iron oxides in soil clays restricts P difusion from the soil to the root surface, limiting crop yields. While increased root surface area favors P uptake under low-P availability, the relationship between the three-dimensional arrangement of the root system and P efciency remains elusive. Here, we simultaneously assessed allelic efects of loci associated with a variety of root and P efciency traits, in addition to grain yield under low-P availability, using multi-trait genome-wide association. We also set out to establish the relationship between root architectural traits assessed in hydroponics and in a low-P soil. Our goal was to better understand the infuence of root morphology and architecture in sorghum performance under low-P availability. Result In general, the same alleles of associated SNPs increased root and P efciency traits including grain yield in a low-P soil. We found that sorghum P efciency relies on pleiotropic loci afecting root traits, which enhance grain yield under low-P availability. Root systems with enhanced surface area stemming from lateral root proliferation mostly up to 40 cm soil depth are important for sorghum adaptation to low-P soils, indicating that diferences in root morphology leading to enhanced P uptake occur exactly in the soil layer where P is found at the highest concentration. Conclusion. Integrated QTLs detected in diferent mapping populations now provide a comprehensive molecular genetic framework for P efciency studies in sorghum. This indicated extensive conservation of P efciency QTL across populations and emphasized the terminal portion of chromosome 3 as an important region for P efciency in sorghum. Increases in root surface area via enhancement of lateral root development is a relevant trait for sorghum low-P soil adaptation, impacting the overall architecture of the sorghum root system. In turn, particularly concerning the critical trait for water and nutrient uptake, root surface area, root system development in deeper soil layers does not occur at the expense of shallow rooting, which may be a key reason leading to the distinctive sorghum adaptation to tropical soils with multiple abiotic stresses including low P availability and drought.

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Main Authors: HUFNAGEL, B., BERNARDINO, K. C., MALOSETTI, M., SOUSA, S. M. de, SILVA, L. A., GUIMARÃES, C. T., COELHO, A. M., SANTOS, T. T., VIANA, J. H. M., SCHAFFERT, R. E., KOCHIAN, L. V., EEUWIJK, F. A., MAGALHAES, J. V. de
Other Authors: BARBARA HUFNAGEL; KARINE C. BERNARDINO, UMR AGAP INSTITUTE; MARCOS MALOSETTI, WAGENINGEN UNIVERSITY AND RESEARCH CENTER, BASF; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; LIDIANNE A. SILVA, UNIVERSIDADE FEDERAL DO ACRE; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; ANTONIO MARCOS COELHO, CNPMS; THIAGO TEIXEIRA SANTOS, CNPTIA; JOAO HERBERT MOREIRA VIANA, CNPMS; ROBERT E. SCHAFFERT; LEON V. KOCHIAN, UNIVERSITY OF SASKATCHEWAN; FRED A. EEUWIJK, WAGENINGEN UNIVERSITY AND RESEARCH CENTER; JURANDIR VIEIRA DE MAGALHAES, CNPMS.
Format: Artigo de periódico biblioteca
Language:eng
Published: 2024-06-24
Subjects:Estresse de fósforo, Eficiência de aquisição de fósforo, Morfologia radicular, Arquitetura radicular, Estudos de associação genômica ampla, Polimorfismos de nucleotídeo único, Loci de característica quantitativa, Phosphorus stress, Phosphorus acquisition efficiency, Root morphology, Root architecture, Genome Wide Association Studies, Sorgo, Phosphorus, Quantitative trait loci, Single nucleotide polymorphism,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1165047
https://doi.org/10.1186/s12870-024-05183-5
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spelling dig-alice-doc-11650472024-06-24T11:58:54Z Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum. HUFNAGEL, B. BERNARDINO, K. C. MALOSETTI, M. SOUSA, S. M. de SILVA, L. A. GUIMARÃES, C. T. COELHO, A. M. SANTOS, T. T. VIANA, J. H. M. SCHAFFERT, R. E. KOCHIAN, L. V. EEUWIJK, F. A. MAGALHAES, J. V. de BARBARA HUFNAGEL; KARINE C. BERNARDINO, UMR AGAP INSTITUTE; MARCOS MALOSETTI, WAGENINGEN UNIVERSITY AND RESEARCH CENTER, BASF; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; LIDIANNE A. SILVA, UNIVERSIDADE FEDERAL DO ACRE; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; ANTONIO MARCOS COELHO, CNPMS; THIAGO TEIXEIRA SANTOS, CNPTIA; JOAO HERBERT MOREIRA VIANA, CNPMS; ROBERT E. SCHAFFERT; LEON V. KOCHIAN, UNIVERSITY OF SASKATCHEWAN; FRED A. EEUWIJK, WAGENINGEN UNIVERSITY AND RESEARCH CENTER; JURANDIR VIEIRA DE MAGALHAES, CNPMS. Estresse de fósforo Eficiência de aquisição de fósforo Morfologia radicular Arquitetura radicular Estudos de associação genômica ampla Polimorfismos de nucleotídeo único Loci de característica quantitativa Phosphorus stress Phosphorus acquisition efficiency Root morphology Root architecture Genome Wide Association Studies Sorgo Phosphorus Quantitative trait loci Single nucleotide polymorphism Abstract. Background. On tropical regions, phosphorus (P) fxation onto aluminum and iron oxides in soil clays restricts P difusion from the soil to the root surface, limiting crop yields. While increased root surface area favors P uptake under low-P availability, the relationship between the three-dimensional arrangement of the root system and P efciency remains elusive. Here, we simultaneously assessed allelic efects of loci associated with a variety of root and P efciency traits, in addition to grain yield under low-P availability, using multi-trait genome-wide association. We also set out to establish the relationship between root architectural traits assessed in hydroponics and in a low-P soil. Our goal was to better understand the infuence of root morphology and architecture in sorghum performance under low-P availability. Result In general, the same alleles of associated SNPs increased root and P efciency traits including grain yield in a low-P soil. We found that sorghum P efciency relies on pleiotropic loci afecting root traits, which enhance grain yield under low-P availability. Root systems with enhanced surface area stemming from lateral root proliferation mostly up to 40 cm soil depth are important for sorghum adaptation to low-P soils, indicating that diferences in root morphology leading to enhanced P uptake occur exactly in the soil layer where P is found at the highest concentration. Conclusion. Integrated QTLs detected in diferent mapping populations now provide a comprehensive molecular genetic framework for P efciency studies in sorghum. This indicated extensive conservation of P efciency QTL across populations and emphasized the terminal portion of chromosome 3 as an important region for P efciency in sorghum. Increases in root surface area via enhancement of lateral root development is a relevant trait for sorghum low-P soil adaptation, impacting the overall architecture of the sorghum root system. In turn, particularly concerning the critical trait for water and nutrient uptake, root surface area, root system development in deeper soil layers does not occur at the expense of shallow rooting, which may be a key reason leading to the distinctive sorghum adaptation to tropical soils with multiple abiotic stresses including low P availability and drought. Na publicação: Jurandir V. Magalhaes. 2024-06-24T11:58:54Z 2024-06-24T11:58:54Z 2024-06-24 2024 Artigo de periódico BMC Plant Biology, v. 24, n. 1, 562, Dec. 2024. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1165047 https://doi.org/10.1186/s12870-024-05183-5 eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language eng
topic Estresse de fósforo
Eficiência de aquisição de fósforo
Morfologia radicular
Arquitetura radicular
Estudos de associação genômica ampla
Polimorfismos de nucleotídeo único
Loci de característica quantitativa
Phosphorus stress
Phosphorus acquisition efficiency
Root morphology
Root architecture
Genome Wide Association Studies
Sorgo
Phosphorus
Quantitative trait loci
Single nucleotide polymorphism
Estresse de fósforo
Eficiência de aquisição de fósforo
Morfologia radicular
Arquitetura radicular
Estudos de associação genômica ampla
Polimorfismos de nucleotídeo único
Loci de característica quantitativa
Phosphorus stress
Phosphorus acquisition efficiency
Root morphology
Root architecture
Genome Wide Association Studies
Sorgo
Phosphorus
Quantitative trait loci
Single nucleotide polymorphism
spellingShingle Estresse de fósforo
Eficiência de aquisição de fósforo
Morfologia radicular
Arquitetura radicular
Estudos de associação genômica ampla
Polimorfismos de nucleotídeo único
Loci de característica quantitativa
Phosphorus stress
Phosphorus acquisition efficiency
Root morphology
Root architecture
Genome Wide Association Studies
Sorgo
Phosphorus
Quantitative trait loci
Single nucleotide polymorphism
Estresse de fósforo
Eficiência de aquisição de fósforo
Morfologia radicular
Arquitetura radicular
Estudos de associação genômica ampla
Polimorfismos de nucleotídeo único
Loci de característica quantitativa
Phosphorus stress
Phosphorus acquisition efficiency
Root morphology
Root architecture
Genome Wide Association Studies
Sorgo
Phosphorus
Quantitative trait loci
Single nucleotide polymorphism
HUFNAGEL, B.
BERNARDINO, K. C.
MALOSETTI, M.
SOUSA, S. M. de
SILVA, L. A.
GUIMARÃES, C. T.
COELHO, A. M.
SANTOS, T. T.
VIANA, J. H. M.
SCHAFFERT, R. E.
KOCHIAN, L. V.
EEUWIJK, F. A.
MAGALHAES, J. V. de
Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
description Abstract. Background. On tropical regions, phosphorus (P) fxation onto aluminum and iron oxides in soil clays restricts P difusion from the soil to the root surface, limiting crop yields. While increased root surface area favors P uptake under low-P availability, the relationship between the three-dimensional arrangement of the root system and P efciency remains elusive. Here, we simultaneously assessed allelic efects of loci associated with a variety of root and P efciency traits, in addition to grain yield under low-P availability, using multi-trait genome-wide association. We also set out to establish the relationship between root architectural traits assessed in hydroponics and in a low-P soil. Our goal was to better understand the infuence of root morphology and architecture in sorghum performance under low-P availability. Result In general, the same alleles of associated SNPs increased root and P efciency traits including grain yield in a low-P soil. We found that sorghum P efciency relies on pleiotropic loci afecting root traits, which enhance grain yield under low-P availability. Root systems with enhanced surface area stemming from lateral root proliferation mostly up to 40 cm soil depth are important for sorghum adaptation to low-P soils, indicating that diferences in root morphology leading to enhanced P uptake occur exactly in the soil layer where P is found at the highest concentration. Conclusion. Integrated QTLs detected in diferent mapping populations now provide a comprehensive molecular genetic framework for P efciency studies in sorghum. This indicated extensive conservation of P efciency QTL across populations and emphasized the terminal portion of chromosome 3 as an important region for P efciency in sorghum. Increases in root surface area via enhancement of lateral root development is a relevant trait for sorghum low-P soil adaptation, impacting the overall architecture of the sorghum root system. In turn, particularly concerning the critical trait for water and nutrient uptake, root surface area, root system development in deeper soil layers does not occur at the expense of shallow rooting, which may be a key reason leading to the distinctive sorghum adaptation to tropical soils with multiple abiotic stresses including low P availability and drought.
author2 BARBARA HUFNAGEL; KARINE C. BERNARDINO, UMR AGAP INSTITUTE; MARCOS MALOSETTI, WAGENINGEN UNIVERSITY AND RESEARCH CENTER, BASF; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; LIDIANNE A. SILVA, UNIVERSIDADE FEDERAL DO ACRE; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; ANTONIO MARCOS COELHO, CNPMS; THIAGO TEIXEIRA SANTOS, CNPTIA; JOAO HERBERT MOREIRA VIANA, CNPMS; ROBERT E. SCHAFFERT; LEON V. KOCHIAN, UNIVERSITY OF SASKATCHEWAN; FRED A. EEUWIJK, WAGENINGEN UNIVERSITY AND RESEARCH CENTER; JURANDIR VIEIRA DE MAGALHAES, CNPMS.
author_facet BARBARA HUFNAGEL; KARINE C. BERNARDINO, UMR AGAP INSTITUTE; MARCOS MALOSETTI, WAGENINGEN UNIVERSITY AND RESEARCH CENTER, BASF; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; LIDIANNE A. SILVA, UNIVERSIDADE FEDERAL DO ACRE; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; ANTONIO MARCOS COELHO, CNPMS; THIAGO TEIXEIRA SANTOS, CNPTIA; JOAO HERBERT MOREIRA VIANA, CNPMS; ROBERT E. SCHAFFERT; LEON V. KOCHIAN, UNIVERSITY OF SASKATCHEWAN; FRED A. EEUWIJK, WAGENINGEN UNIVERSITY AND RESEARCH CENTER; JURANDIR VIEIRA DE MAGALHAES, CNPMS.
HUFNAGEL, B.
BERNARDINO, K. C.
MALOSETTI, M.
SOUSA, S. M. de
SILVA, L. A.
GUIMARÃES, C. T.
COELHO, A. M.
SANTOS, T. T.
VIANA, J. H. M.
SCHAFFERT, R. E.
KOCHIAN, L. V.
EEUWIJK, F. A.
MAGALHAES, J. V. de
format Artigo de periódico
topic_facet Estresse de fósforo
Eficiência de aquisição de fósforo
Morfologia radicular
Arquitetura radicular
Estudos de associação genômica ampla
Polimorfismos de nucleotídeo único
Loci de característica quantitativa
Phosphorus stress
Phosphorus acquisition efficiency
Root morphology
Root architecture
Genome Wide Association Studies
Sorgo
Phosphorus
Quantitative trait loci
Single nucleotide polymorphism
author HUFNAGEL, B.
BERNARDINO, K. C.
MALOSETTI, M.
SOUSA, S. M. de
SILVA, L. A.
GUIMARÃES, C. T.
COELHO, A. M.
SANTOS, T. T.
VIANA, J. H. M.
SCHAFFERT, R. E.
KOCHIAN, L. V.
EEUWIJK, F. A.
MAGALHAES, J. V. de
author_sort HUFNAGEL, B.
title Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
title_short Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
title_full Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
title_fullStr Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
title_full_unstemmed Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
title_sort multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum.
publishDate 2024-06-24
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1165047
https://doi.org/10.1186/s12870-024-05183-5
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