Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.

We evaluated the genetic variability of a collection of Jatropha curcas germplasm, represented by 93 accessions, using microsatellite markers. Among the 60 markers tested, five of them detected polymorphisms, with a total of 11 alleles and mean of 2.2 alleles per loci. These five markers enabled the quan-tification of genetic variability through estimates of expected (He=0.42) and observed (Ho=0.64) heterozygosity, Shannon-Weaver index (H?=0.62), coefficient of inbreeding (?=-0.44) and the formation of 11 clusters. Simultaneously, 14 accessions randomly sampled among the 93 and represented by seven plants each, were analyzed with these same five markers to quantify the within and between variability. Most of the genetic variation (92.58%) was contained within the accessions. These analyses revealed, for the first time, expressive genetic variability to be explored in this collection. The accessions UFVJC 05, 07, 12, 18, and 53 presented expressive variability among them with potential for the constitution of a base population for the breeding program.

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Main Authors: SOUZA, R. de L., DIAS, L. A. dos S., CORRÊA, T. R., CAIXETA, E. T., FERNANDES, E. da C., MUNIZ, D. R., ROSMANINHO, L. B. de C., CARDOSO, P. M. R.
Other Authors: Romero de Lima Souza, Universidade Federral de Viçosa; Luiz Antônio dos Santos Dias, Universidade Federal de Viçosa; Thais Roseli Corrêa, Universidade Estadual do Maranhão; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; Erika da Costa Fernandes, Universidade Federal de Viçosa; Dandara Rêgo Muniz, Universidade Federal de Viçosa; Lucas Barbosa de Castro Rosmaninho, Universidade Federal de Viçosa; Poliane Marcele Ribeiro Cardoso, Universidade Federal de Viçosa.
Format: Artigo de periódico biblioteca
Language:Ingles
English
Published: 2020-10-15
Subjects:Molecular marker, Germplasm bank, Biofuel, Jatropha Curcas, Variability, Breeding,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125515
http://dx.doi.org/10.1590/1984-70332019v19n3a46
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spelling dig-alice-doc-11255152020-10-16T09:13:45Z Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels. SOUZA, R. de L. DIAS, L. A. dos S. CORRÊA, T. R. CAIXETA, E. T. FERNANDES, E. da C. MUNIZ, D. R. ROSMANINHO, L. B. de C. CARDOSO, P. M. R. Romero de Lima Souza, Universidade Federral de Viçosa; Luiz Antônio dos Santos Dias, Universidade Federal de Viçosa; Thais Roseli Corrêa, Universidade Estadual do Maranhão; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; Erika da Costa Fernandes, Universidade Federal de Viçosa; Dandara Rêgo Muniz, Universidade Federal de Viçosa; Lucas Barbosa de Castro Rosmaninho, Universidade Federal de Viçosa; Poliane Marcele Ribeiro Cardoso, Universidade Federal de Viçosa. Molecular marker Germplasm bank Biofuel Jatropha Curcas Variability Breeding We evaluated the genetic variability of a collection of Jatropha curcas germplasm, represented by 93 accessions, using microsatellite markers. Among the 60 markers tested, five of them detected polymorphisms, with a total of 11 alleles and mean of 2.2 alleles per loci. These five markers enabled the quan-tification of genetic variability through estimates of expected (He=0.42) and observed (Ho=0.64) heterozygosity, Shannon-Weaver index (H?=0.62), coefficient of inbreeding (?=-0.44) and the formation of 11 clusters. Simultaneously, 14 accessions randomly sampled among the 93 and represented by seven plants each, were analyzed with these same five markers to quantify the within and between variability. Most of the genetic variation (92.58%) was contained within the accessions. These analyses revealed, for the first time, expressive genetic variability to be explored in this collection. The accessions UFVJC 05, 07, 12, 18, and 53 presented expressive variability among them with potential for the constitution of a base population for the breeding program. 2020-10-16T09:13:38Z 2020-10-16T09:13:38Z 2020-10-15 2019 Artigo de periódico Crop Breeding and Applied Biotechnology, v. 19, n. 3, p. 337-346, 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125515 http://dx.doi.org/10.1590/1984-70332019v19n3a46 Ingles en openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language Ingles
English
topic Molecular marker
Germplasm bank
Biofuel
Jatropha Curcas
Variability
Breeding
Molecular marker
Germplasm bank
Biofuel
Jatropha Curcas
Variability
Breeding
spellingShingle Molecular marker
Germplasm bank
Biofuel
Jatropha Curcas
Variability
Breeding
Molecular marker
Germplasm bank
Biofuel
Jatropha Curcas
Variability
Breeding
SOUZA, R. de L.
DIAS, L. A. dos S.
CORRÊA, T. R.
CAIXETA, E. T.
FERNANDES, E. da C.
MUNIZ, D. R.
ROSMANINHO, L. B. de C.
CARDOSO, P. M. R.
Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
description We evaluated the genetic variability of a collection of Jatropha curcas germplasm, represented by 93 accessions, using microsatellite markers. Among the 60 markers tested, five of them detected polymorphisms, with a total of 11 alleles and mean of 2.2 alleles per loci. These five markers enabled the quan-tification of genetic variability through estimates of expected (He=0.42) and observed (Ho=0.64) heterozygosity, Shannon-Weaver index (H?=0.62), coefficient of inbreeding (?=-0.44) and the formation of 11 clusters. Simultaneously, 14 accessions randomly sampled among the 93 and represented by seven plants each, were analyzed with these same five markers to quantify the within and between variability. Most of the genetic variation (92.58%) was contained within the accessions. These analyses revealed, for the first time, expressive genetic variability to be explored in this collection. The accessions UFVJC 05, 07, 12, 18, and 53 presented expressive variability among them with potential for the constitution of a base population for the breeding program.
author2 Romero de Lima Souza, Universidade Federral de Viçosa; Luiz Antônio dos Santos Dias, Universidade Federal de Viçosa; Thais Roseli Corrêa, Universidade Estadual do Maranhão; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; Erika da Costa Fernandes, Universidade Federal de Viçosa; Dandara Rêgo Muniz, Universidade Federal de Viçosa; Lucas Barbosa de Castro Rosmaninho, Universidade Federal de Viçosa; Poliane Marcele Ribeiro Cardoso, Universidade Federal de Viçosa.
author_facet Romero de Lima Souza, Universidade Federral de Viçosa; Luiz Antônio dos Santos Dias, Universidade Federal de Viçosa; Thais Roseli Corrêa, Universidade Estadual do Maranhão; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; Erika da Costa Fernandes, Universidade Federal de Viçosa; Dandara Rêgo Muniz, Universidade Federal de Viçosa; Lucas Barbosa de Castro Rosmaninho, Universidade Federal de Viçosa; Poliane Marcele Ribeiro Cardoso, Universidade Federal de Viçosa.
SOUZA, R. de L.
DIAS, L. A. dos S.
CORRÊA, T. R.
CAIXETA, E. T.
FERNANDES, E. da C.
MUNIZ, D. R.
ROSMANINHO, L. B. de C.
CARDOSO, P. M. R.
format Artigo de periódico
topic_facet Molecular marker
Germplasm bank
Biofuel
Jatropha Curcas
Variability
Breeding
author SOUZA, R. de L.
DIAS, L. A. dos S.
CORRÊA, T. R.
CAIXETA, E. T.
FERNANDES, E. da C.
MUNIZ, D. R.
ROSMANINHO, L. B. de C.
CARDOSO, P. M. R.
author_sort SOUZA, R. de L.
title Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
title_short Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
title_full Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
title_fullStr Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
title_full_unstemmed Genetic variability revealed by microsatellite markers in a germplasm collection of Jatropha curcas L. in Brazil: an important plant for biofuels.
title_sort genetic variability revealed by microsatellite markers in a germplasm collection of jatropha curcas l. in brazil: an important plant for biofuels.
publishDate 2020-10-15
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125515
http://dx.doi.org/10.1590/1984-70332019v19n3a46
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