Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.

Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.

Tambaqui (Colossoma macropomum) is the most important native freshwater fish farmed in Brazil. Production and supply chains are consistently growing, while current yearly production levels of this species exceed 200.000mt. Recent efforts of our research team have produced a draft genome sequence for this species. Here we describe results from SNP discovery efforts using deep sequencing of reduced representation libraries (RRLs) of varying fragment sizes. Ten micrograms of bulked DNA samples from 63 unrelated fish (males and females) were completely digested with HaeIII.

Saved in:
Bibliographic Details
Main Authors: IANELLA, P., YAMAGISHI, M. E. B., VARELA, E. S., VILLELA, L. C. V., PAIVA, S. R., CAETANO, A. R.
Other Authors: PATRICIA IANELLA, Cenargen; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; EDUARDO SOUSA VARELA, CNPASA; LUCIANA CRISTINE VASQUES VILLELA, CNPASA; SAMUEL REZENDE PAIVA, Cenargen; ALEXANDRE RODRIGUES CAETANO, Cenargen.
Format: Anais e Proceedings de eventos biblioteca
Language:pt_BR
pt_BR
Published: 2020-01-15
Subjects:Colossoma Macropomum, Tambaqui, Peixe, Single nucleotide polymorphism, Bioinformatics, Fish,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1118808
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-alice-doc-1118808
record_format koha
spelling dig-alice-doc-11188082020-01-15T18:13:19Z Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing. IANELLA, P. YAMAGISHI, M. E. B. VARELA, E. S. VILLELA, L. C. V. PAIVA, S. R. CAETANO, A. R. PATRICIA IANELLA, Cenargen; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; EDUARDO SOUSA VARELA, CNPASA; LUCIANA CRISTINE VASQUES VILLELA, CNPASA; SAMUEL REZENDE PAIVA, Cenargen; ALEXANDRE RODRIGUES CAETANO, Cenargen. Colossoma Macropomum Tambaqui Peixe Single nucleotide polymorphism Bioinformatics Fish Tambaqui (Colossoma macropomum) is the most important native freshwater fish farmed in Brazil. Production and supply chains are consistently growing, while current yearly production levels of this species exceed 200.000mt. Recent efforts of our research team have produced a draft genome sequence for this species. Here we describe results from SNP discovery efforts using deep sequencing of reduced representation libraries (RRLs) of varying fragment sizes. Ten micrograms of bulked DNA samples from 63 unrelated fish (males and females) were completely digested with HaeIII. 2020-01-15T18:13:14Z 2020-01-15T18:13:14Z 2020-01-15 2019 2020-01-15T18:13:14Z Anais e Proceedings de eventos In: AQUACULTURE, 2019, New Orleans. Abstracts. [S.l.]: Word Aquaculture society, 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1118808 pt_BR pt_BR openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language pt_BR
pt_BR
topic Colossoma Macropomum
Tambaqui
Peixe
Single nucleotide polymorphism
Bioinformatics
Fish
Colossoma Macropomum
Tambaqui
Peixe
Single nucleotide polymorphism
Bioinformatics
Fish
spellingShingle Colossoma Macropomum
Tambaqui
Peixe
Single nucleotide polymorphism
Bioinformatics
Fish
Colossoma Macropomum
Tambaqui
Peixe
Single nucleotide polymorphism
Bioinformatics
Fish
IANELLA, P.
YAMAGISHI, M. E. B.
VARELA, E. S.
VILLELA, L. C. V.
PAIVA, S. R.
CAETANO, A. R.
Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
description Tambaqui (Colossoma macropomum) is the most important native freshwater fish farmed in Brazil. Production and supply chains are consistently growing, while current yearly production levels of this species exceed 200.000mt. Recent efforts of our research team have produced a draft genome sequence for this species. Here we describe results from SNP discovery efforts using deep sequencing of reduced representation libraries (RRLs) of varying fragment sizes. Ten micrograms of bulked DNA samples from 63 unrelated fish (males and females) were completely digested with HaeIII.
author2 PATRICIA IANELLA, Cenargen; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; EDUARDO SOUSA VARELA, CNPASA; LUCIANA CRISTINE VASQUES VILLELA, CNPASA; SAMUEL REZENDE PAIVA, Cenargen; ALEXANDRE RODRIGUES CAETANO, Cenargen.
author_facet PATRICIA IANELLA, Cenargen; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; EDUARDO SOUSA VARELA, CNPASA; LUCIANA CRISTINE VASQUES VILLELA, CNPASA; SAMUEL REZENDE PAIVA, Cenargen; ALEXANDRE RODRIGUES CAETANO, Cenargen.
IANELLA, P.
YAMAGISHI, M. E. B.
VARELA, E. S.
VILLELA, L. C. V.
PAIVA, S. R.
CAETANO, A. R.
format Anais e Proceedings de eventos
topic_facet Colossoma Macropomum
Tambaqui
Peixe
Single nucleotide polymorphism
Bioinformatics
Fish
author IANELLA, P.
YAMAGISHI, M. E. B.
VARELA, E. S.
VILLELA, L. C. V.
PAIVA, S. R.
CAETANO, A. R.
author_sort IANELLA, P.
title Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
title_short Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
title_full Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
title_fullStr Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
title_full_unstemmed Tambaqui (Colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
title_sort tambaqui (colossoma macropomum) single nucleotide polymorphism discovery by reduced representation library deep sequencing.
publishDate 2020-01-15
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1118808
work_keys_str_mv AT ianellap tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
AT yamagishimeb tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
AT varelaes tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
AT villelalcv tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
AT paivasr tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
AT caetanoar tambaquicolossomamacropomumsinglenucleotidepolymorphismdiscoverybyreducedrepresentationlibrarydeepsequencing
_version_ 1756026723356377088

Similar Items