Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance.
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Format: | Anais e Proceedings de eventos biblioteca |
Language: | English eng |
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2018-01-09
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Subjects: | DREB family, Genetic factors., Coffea Arábica., Abiotic stress., |
Online Access: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646 |
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dig-alice-doc-10846462018-01-11T23:29:26Z Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. TORRES, L. F. DÉCHAMP, E. ALVES, G. S. C. MARRACCINI, P. ETIENNE, H. ANDRADE, A. C. Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC. DREB family Genetic factors. Coffea Arábica. Abiotic stress. In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance. 2018-01-11T23:29:20Z 2018-01-11T23:29:20Z 2018-01-09 2017 2018-01-11T23:29:20Z Anais e Proceedings de eventos In: SIMPÓSIO INTERNACIONAL DE GENÉTICA E MELHORAMENTO, 8., 2017, Viçosa, MG. Ômicas: do gene ao fenótipo. [Proceedings...] Viçosa, MG: UFV, 2017. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646 en eng openAccess |
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DREB family Genetic factors. Coffea Arábica. Abiotic stress. DREB family Genetic factors. Coffea Arábica. Abiotic stress. |
spellingShingle |
DREB family Genetic factors. Coffea Arábica. Abiotic stress. DREB family Genetic factors. Coffea Arábica. Abiotic stress. TORRES, L. F. DÉCHAMP, E. ALVES, G. S. C. MARRACCINI, P. ETIENNE, H. ANDRADE, A. C. Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
description |
In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance. |
author2 |
Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC. |
author_facet |
Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC. TORRES, L. F. DÉCHAMP, E. ALVES, G. S. C. MARRACCINI, P. ETIENNE, H. ANDRADE, A. C. |
format |
Anais e Proceedings de eventos |
topic_facet |
DREB family Genetic factors. Coffea Arábica. Abiotic stress. |
author |
TORRES, L. F. DÉCHAMP, E. ALVES, G. S. C. MARRACCINI, P. ETIENNE, H. ANDRADE, A. C. |
author_sort |
TORRES, L. F. |
title |
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
title_short |
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
title_full |
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
title_fullStr |
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
title_full_unstemmed |
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
title_sort |
transcriptome analysis in coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. |
publishDate |
2018-01-09 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646 |
work_keys_str_mv |
AT torreslf transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves AT dechampe transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves AT alvesgsc transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves AT marraccinip transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves AT etienneh transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves AT andradeac transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves |
_version_ |
1756024253938925568 |