Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.

In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance.

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Bibliographic Details
Main Authors: TORRES, L. F., DÉCHAMP, E., ALVES, G. S. C., MARRACCINI, P., ETIENNE, H., ANDRADE, A. C.
Other Authors: Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC.
Format: Anais e Proceedings de eventos biblioteca
Language:English
eng
Published: 2018-01-09
Subjects:DREB family, Genetic factors., Coffea Arábica., Abiotic stress.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646
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spelling dig-alice-doc-10846462018-01-11T23:29:26Z Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves. TORRES, L. F. DÉCHAMP, E. ALVES, G. S. C. MARRACCINI, P. ETIENNE, H. ANDRADE, A. C. Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC. DREB family Genetic factors. Coffea Arábica. Abiotic stress. In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance. 2018-01-11T23:29:20Z 2018-01-11T23:29:20Z 2018-01-09 2017 2018-01-11T23:29:20Z Anais e Proceedings de eventos In: SIMPÓSIO INTERNACIONAL DE GENÉTICA E MELHORAMENTO, 8., 2017, Viçosa, MG. Ômicas: do gene ao fenótipo. [Proceedings...] Viçosa, MG: UFV, 2017. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic DREB family
Genetic factors.
Coffea Arábica.
Abiotic stress.
DREB family
Genetic factors.
Coffea Arábica.
Abiotic stress.
spellingShingle DREB family
Genetic factors.
Coffea Arábica.
Abiotic stress.
DREB family
Genetic factors.
Coffea Arábica.
Abiotic stress.
TORRES, L. F.
DÉCHAMP, E.
ALVES, G. S. C.
MARRACCINI, P.
ETIENNE, H.
ANDRADE, A. C.
Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
description In recent years, Coffea ssp. has become subject of increasing research in gene expression analysis, in the quest to find genetic factors associated to abiotic stress responses with special attention to transcription factors such as the DREB family. This focus was due to their involvement in the regulation of many stress-related genes that play an important role in cascading a response to an environmental stimuli. RNA-seq analysis, creates the possibility to s study the transcriptome and to identify differentially expressed genes upon an abiotic stress or any important agronomic trait. The main objectives of this work were to obtain an overview of the transcriptionally active genes in Arabica coffee leaves when subjected to several abiotic stresses and to analyze specific highly expressed candidate genes for environmental-stresses tolerance.
author2 Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC.
author_facet Luana Ferreira Torres, UFLA; Eveline Déchamp, CIRAD, UMR IPME; Gabriel Sérgio Costa Alves; Pierre Marraccini; Hervé Etienne; ALAN CARVALHO ANDRADE, SAPC.
TORRES, L. F.
DÉCHAMP, E.
ALVES, G. S. C.
MARRACCINI, P.
ETIENNE, H.
ANDRADE, A. C.
format Anais e Proceedings de eventos
topic_facet DREB family
Genetic factors.
Coffea Arábica.
Abiotic stress.
author TORRES, L. F.
DÉCHAMP, E.
ALVES, G. S. C.
MARRACCINI, P.
ETIENNE, H.
ANDRADE, A. C.
author_sort TORRES, L. F.
title Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
title_short Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
title_full Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
title_fullStr Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
title_full_unstemmed Transcriptome analysis in Coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
title_sort transcriptome analysis in coffea arabica, under several abiotic stresses, reveals differentially expressed genes in leaves.
publishDate 2018-01-09
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1084646
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AT dechampe transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves
AT alvesgsc transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves
AT marraccinip transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves
AT etienneh transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves
AT andradeac transcriptomeanalysisincoffeaarabicaunderseveralabioticstressesrevealsdifferentiallyexpressedgenesinleaves
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