Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.

Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts

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Main Authors: CUNHA, E. F. M., SILVA, C. R. de S., ALBUQUERQUE, P. S. B. de, RAMALHO, G. F., PONTES, L. C. G., FARIAS NETO, J. T. de
Other Authors: ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2016-06-02
Subjects:Recursos genéticos, Macaxeira., Banco de Germoplasma, Manihot Esculenta., Mandioca, cassava, genetic resources.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144
http://dx.doi.org/10.1590/1984-70332016v16n1a5
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spelling dig-alice-doc-10461442017-08-16T03:42:23Z Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. CUNHA, E. F. M. SILVA, C. R. de S. ALBUQUERQUE, P. S. B. de RAMALHO, G. F. PONTES, L. C. G. FARIAS NETO, J. T. de ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU. Recursos genéticos Macaxeira. Banco de Germoplasma Manihot Esculenta. Mandioca cassava genetic resources. Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts 2016-06-02T11:11:11Z 2016-06-02T11:11:11Z 2016-06-02 2016 2017-09-28T11:11:11Z Artigo de periódico Crop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144 http://dx.doi.org/10.1590/1984-70332016v16n1a5 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Recursos genéticos
Macaxeira.
Banco de Germoplasma
Manihot Esculenta.
Mandioca
cassava
genetic resources.
Recursos genéticos
Macaxeira.
Banco de Germoplasma
Manihot Esculenta.
Mandioca
cassava
genetic resources.
spellingShingle Recursos genéticos
Macaxeira.
Banco de Germoplasma
Manihot Esculenta.
Mandioca
cassava
genetic resources.
Recursos genéticos
Macaxeira.
Banco de Germoplasma
Manihot Esculenta.
Mandioca
cassava
genetic resources.
CUNHA, E. F. M.
SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
description Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts
author2 ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.
author_facet ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.
CUNHA, E. F. M.
SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
format Artigo de periódico
topic_facet Recursos genéticos
Macaxeira.
Banco de Germoplasma
Manihot Esculenta.
Mandioca
cassava
genetic resources.
author CUNHA, E. F. M.
SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
author_sort CUNHA, E. F. M.
title Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_short Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_full Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_fullStr Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_full_unstemmed Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_sort molecular characterization of 'sweet' cassavas (manihot esculenta) from a germplasm bank in brazilian eastern amazonia.
publishDate 2016-06-02
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144
http://dx.doi.org/10.1590/1984-70332016v16n1a5
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