Selection of the most informative morphoagronomic descriptors for cassava germplasm.
The objective of this work was to select the most informative morphoagronomic descriptors for cassava (Manihot esculenta) germplasm and to evaluate the ability of different methods to select the descriptors. Ninety?five accessions were characterized using 51 morphoagronomic descriptors. Data were subjected to a multiple correspondence analysis (MCA), whose information was used in the following four methods of descriptor selection: reverse order of the descriptor for the pth factorial axis of the MCA (Jolliffe); sequential, multiple correspondence analysis (SMCA); mean of the contribution orders of the descriptor in the first three factorial axes (C3PA); and C3PA method weighted by the respective eigenvalues of the full analysis (C3PAWeig). The correlations between the dissimilarity matrix with all descriptors and the most informative descriptors were high and significant (0.75, 0.77, 0.83, and 0.84 for C3PAWeig, C3PA, SMCA, and Jolliffe, respectively). The less informative descriptors were discarded, considering those common among the selection methods and relevant for the breeding interests. Therefore, 32 morphoagronomic descriptors with correlation between the dissimilarity matrices (r=0.81) were selected, due to their high capacity to discriminate cassava germplasm and to their ability to maintain some preliminary agronomic traits, useful for the initial characterization of the germplasm.
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Language: | English eng |
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2015-01-15
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Subjects: | Recurso genético, Recurso natural, Manihot Esculenta., Cassava, Genetic resources., |
Online Access: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1005735 |
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dig-alice-doc-10057352017-08-16T01:42:45Z Selection of the most informative morphoagronomic descriptors for cassava germplasm. OLIVEIRA, E. J. de OLIVEIRA FILHO, O. S. de SANTOS, V. da S. EDER JORGE DE OLIVEIRA, CNPMF; OSVALDO SEBASTIÃO DE OLIVEIRA FILHO, UFRB; VANDERLEI DA SILVA SANTOS, CNPMF. Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. The objective of this work was to select the most informative morphoagronomic descriptors for cassava (Manihot esculenta) germplasm and to evaluate the ability of different methods to select the descriptors. Ninety?five accessions were characterized using 51 morphoagronomic descriptors. Data were subjected to a multiple correspondence analysis (MCA), whose information was used in the following four methods of descriptor selection: reverse order of the descriptor for the pth factorial axis of the MCA (Jolliffe); sequential, multiple correspondence analysis (SMCA); mean of the contribution orders of the descriptor in the first three factorial axes (C3PA); and C3PA method weighted by the respective eigenvalues of the full analysis (C3PAWeig). The correlations between the dissimilarity matrix with all descriptors and the most informative descriptors were high and significant (0.75, 0.77, 0.83, and 0.84 for C3PAWeig, C3PA, SMCA, and Jolliffe, respectively). The less informative descriptors were discarded, considering those common among the selection methods and relevant for the breeding interests. Therefore, 32 morphoagronomic descriptors with correlation between the dissimilarity matrices (r=0.81) were selected, due to their high capacity to discriminate cassava germplasm and to their ability to maintain some preliminary agronomic traits, useful for the initial characterization of the germplasm. 2015-01-15T11:11:11Z 2015-01-15T11:11:11Z 2015-01-15 2014 2015-02-24T11:11:11Z Artigo de periódico Pesquisa Agropecuária Brasileira, Brasília, DF, v. 49, n. 11, p. 891-900, nov. 2014. 1678-3921 http://www.alice.cnptia.embrapa.br/alice/handle/doc/1005735 10.1590/S0100-204X2014001100008 en eng openAccess |
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Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. |
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Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. OLIVEIRA, E. J. de OLIVEIRA FILHO, O. S. de SANTOS, V. da S. Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
description |
The objective of this work was to select the most informative morphoagronomic descriptors for cassava (Manihot esculenta) germplasm and to evaluate the ability of different methods to select the descriptors. Ninety?five accessions were characterized using 51 morphoagronomic descriptors. Data were subjected to a multiple correspondence analysis (MCA), whose information was used in the following four methods of descriptor selection: reverse order of the descriptor for the pth factorial axis of the MCA (Jolliffe); sequential, multiple correspondence analysis (SMCA); mean of the contribution orders of the descriptor in the first three factorial axes (C3PA); and C3PA method weighted by the respective eigenvalues of the full analysis (C3PAWeig). The correlations between the dissimilarity matrix with all descriptors and the most informative descriptors were high and significant (0.75, 0.77, 0.83, and 0.84 for C3PAWeig, C3PA, SMCA, and Jolliffe, respectively). The less informative descriptors were discarded, considering those common among the selection methods and relevant for the breeding interests. Therefore, 32 morphoagronomic descriptors with correlation between the dissimilarity matrices (r=0.81) were selected, due to their high capacity to discriminate cassava germplasm and to their ability to maintain some preliminary agronomic traits, useful for the initial characterization of the germplasm. |
author2 |
EDER JORGE DE OLIVEIRA, CNPMF; OSVALDO SEBASTIÃO DE OLIVEIRA FILHO, UFRB; VANDERLEI DA SILVA SANTOS, CNPMF. |
author_facet |
EDER JORGE DE OLIVEIRA, CNPMF; OSVALDO SEBASTIÃO DE OLIVEIRA FILHO, UFRB; VANDERLEI DA SILVA SANTOS, CNPMF. OLIVEIRA, E. J. de OLIVEIRA FILHO, O. S. de SANTOS, V. da S. |
format |
Artigo de periódico |
topic_facet |
Recurso genético Recurso natural Manihot Esculenta. Cassava Genetic resources. |
author |
OLIVEIRA, E. J. de OLIVEIRA FILHO, O. S. de SANTOS, V. da S. |
author_sort |
OLIVEIRA, E. J. de |
title |
Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
title_short |
Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
title_full |
Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
title_fullStr |
Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
title_full_unstemmed |
Selection of the most informative morphoagronomic descriptors for cassava germplasm. |
title_sort |
selection of the most informative morphoagronomic descriptors for cassava germplasm. |
publishDate |
2015-01-15 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1005735 |
work_keys_str_mv |
AT oliveiraejde selectionofthemostinformativemorphoagronomicdescriptorsforcassavagermplasm AT oliveirafilhoosde selectionofthemostinformativemorphoagronomicdescriptorsforcassavagermplasm AT santosvdas selectionofthemostinformativemorphoagronomicdescriptorsforcassavagermplasm |
_version_ |
1756020401792614400 |