High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections

High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections

The study was conducted to evaluate the genetic diversity, structure, and relatedness of wild grapevine species material preserved at the UDSA ARS grapevine germplasms. We used genome wide SNPs developed from genotyping by sequencing methods, coupled with phylogenetic analysis to uncover the underlying genetic diversity of the samples. This study is relevant for two aspects; clarifying the evolutionary relationships within the genus Vitis, and helping to curate the current species designations used in the USDA-GRIN system for grapevine.

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Bibliographic Details
Main Author: USDA-ARS (17854919)
Format: Dataset biblioteca
Published: 2017
Subjects:Genetics, raw sequence reads,
Online Access:https://figshare.com/articles/dataset/High-throughput_sequencing_data_clarify_evolutionary_relationships_among_North_American_Vitis_species_and_improve_identification_in_USDA_Vitis_germplasm_collections/25082630
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id dat-usda-us-article25082630
record_format figshare
spelling dat-usda-us-article250826302017-10-18T00:00:00Z High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections USDA-ARS (17854919) Genetics raw sequence reads The study was conducted to evaluate the genetic diversity, structure, and relatedness of wild grapevine species material preserved at the UDSA ARS grapevine germplasms. We used genome wide SNPs developed from genotyping by sequencing methods, coupled with phylogenetic analysis to uncover the underlying genetic diversity of the samples. This study is relevant for two aspects; clarifying the evolutionary relationships within the genus Vitis, and helping to curate the current species designations used in the USDA-GRIN system for grapevine. 2017-10-18T00:00:00Z Dataset Dataset 10113/AF25082630 https://figshare.com/articles/dataset/High-throughput_sequencing_data_clarify_evolutionary_relationships_among_North_American_Vitis_species_and_improve_identification_in_USDA_Vitis_germplasm_collections/25082630 Copyright Undetermined
institution USDA US
collection Figshare
country Estados Unidos
countrycode US
component Datos de investigación
access En linea
databasecode dat-usda-us
tag biblioteca
region America del Norte
libraryname National Agricultural Library of USDA
topic Genetics
raw sequence reads
spellingShingle Genetics
raw sequence reads
USDA-ARS (17854919)
High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
description The study was conducted to evaluate the genetic diversity, structure, and relatedness of wild grapevine species material preserved at the UDSA ARS grapevine germplasms. We used genome wide SNPs developed from genotyping by sequencing methods, coupled with phylogenetic analysis to uncover the underlying genetic diversity of the samples. This study is relevant for two aspects; clarifying the evolutionary relationships within the genus Vitis, and helping to curate the current species designations used in the USDA-GRIN system for grapevine.
format Dataset
author USDA-ARS (17854919)
author_facet USDA-ARS (17854919)
author_sort USDA-ARS (17854919)
title High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
title_short High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
title_full High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
title_fullStr High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
title_full_unstemmed High-throughput sequencing data clarify evolutionary relationships among North American Vitis species and improve identification in USDA Vitis germplasm collections
title_sort high-throughput sequencing data clarify evolutionary relationships among north american vitis species and improve identification in usda vitis germplasm collections
publishDate 2017
url https://figshare.com/articles/dataset/High-throughput_sequencing_data_clarify_evolutionary_relationships_among_North_American_Vitis_species_and_improve_identification_in_USDA_Vitis_germplasm_collections/25082630
work_keys_str_mv AT usdaars17854919 highthroughputsequencingdataclarifyevolutionaryrelationshipsamongnorthamericanvitisspeciesandimproveidentificationinusdavitisgermplasmcollections
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