WGS sequencing, assembly, and annotation

DOE Joint Genome Institute (18794776); USDA - Agricultural Research Service (18794854); Plant Research International (18795400); Stanford Human Genome Center (SHGC) (18795403)

WGS sequencing, assembly, and annotation

The Department of Energy (DOE) Joint Genome Institute (JGI), in collaboration with the USDA - Agricultural Research Service and Plant Research International, sequenced the Mycosphaerella graminicola strain IPO323 genome at 8.9X coverage using whole genome shotgun (WGS) sequencing. The genome was annotated using both automated and manual methods. The M. graminicola genome is being finished at the Stanford Human Genome Center (SHGC). The M. graminicola isolate IPO323 is a Dutch field strain that was isolated in 1984 from the wheat cultivar Arminda.

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Bibliographic Details
Main Authors:	DOE Joint Genome Institute (18794776), USDA - Agricultural Research Service (18794854), Plant Research International (18795400), Stanford Human Genome Center (SHGC) (18795403)
Format:	Dataset biblioteca
Published:	2011
Subjects:	Genetics, Zymoseptoria tritici IPO323, IPO323, eEukaryotes,
Online Access:	https://figshare.com/articles/dataset/WGS_sequencing_assembly_and_annotation/25079321
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id	dat-usda-us-article25079321
record_format	figshare
spelling	dat-usda-us-article250793212011-06-22T00:00:00Z WGS sequencing, assembly, and annotation DOE Joint Genome Institute (18794776) USDA - Agricultural Research Service (18794854) Plant Research International (18795400) Stanford Human Genome Center (SHGC) (18795403) Genetics Zymoseptoria tritici IPO323 IPO323 eEukaryotes The Department of Energy (DOE) Joint Genome Institute (JGI), in collaboration with the USDA - Agricultural Research Service and Plant Research International, sequenced the Mycosphaerella graminicola strain IPO323 genome at 8.9X coverage using whole genome shotgun (WGS) sequencing. The genome was annotated using both automated and manual methods. The M. graminicola genome is being finished at the Stanford Human Genome Center (SHGC). The M. graminicola isolate IPO323 is a Dutch field strain that was isolated in 1984 from the wheat cultivar Arminda. 2011-06-22T00:00:00Z Dataset Dataset 10113/AF25079321 https://figshare.com/articles/dataset/WGS_sequencing_assembly_and_annotation/25079321 Copyright Undetermined
institution	USDA US
collection	Figshare
country	Estados Unidos
countrycode	US
component	Datos de investigación
access	En linea
databasecode	dat-usda-us
tag	biblioteca
region	America del Norte
libraryname	National Agricultural Library of USDA
topic	Genetics Zymoseptoria tritici IPO323 IPO323 eEukaryotes
spellingShingle	Genetics Zymoseptoria tritici IPO323 IPO323 eEukaryotes DOE Joint Genome Institute (18794776) USDA - Agricultural Research Service (18794854) Plant Research International (18795400) Stanford Human Genome Center (SHGC) (18795403) WGS sequencing, assembly, and annotation
description	The Department of Energy (DOE) Joint Genome Institute (JGI), in collaboration with the USDA - Agricultural Research Service and Plant Research International, sequenced the Mycosphaerella graminicola strain IPO323 genome at 8.9X coverage using whole genome shotgun (WGS) sequencing. The genome was annotated using both automated and manual methods. The M. graminicola genome is being finished at the Stanford Human Genome Center (SHGC). The M. graminicola isolate IPO323 is a Dutch field strain that was isolated in 1984 from the wheat cultivar Arminda.
format	Dataset
author	DOE Joint Genome Institute (18794776) USDA - Agricultural Research Service (18794854) Plant Research International (18795400) Stanford Human Genome Center (SHGC) (18795403)
author_facet	DOE Joint Genome Institute (18794776) USDA - Agricultural Research Service (18794854) Plant Research International (18795400) Stanford Human Genome Center (SHGC) (18795403)
author_sort	DOE Joint Genome Institute (18794776)
title	WGS sequencing, assembly, and annotation
title_short	WGS sequencing, assembly, and annotation
title_full	WGS sequencing, assembly, and annotation
title_fullStr	WGS sequencing, assembly, and annotation
title_full_unstemmed	WGS sequencing, assembly, and annotation
title_sort	wgs sequencing, assembly, and annotation
publishDate	2011
url	https://figshare.com/articles/dataset/WGS_sequencing_assembly_and_annotation/25079321
work_keys_str_mv	AT doejointgenomeinstitute18794776 wgssequencingassemblyandannotation AT usdaagriculturalresearchservice18794854 wgssequencingassemblyandannotation AT plantresearchinternational18795400 wgssequencingassemblyandannotation AT stanfordhumangenomecentershgc18795403 wgssequencingassemblyandannotation
_version_	1808945484329385984

WGS sequencing, assembly, and annotation

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