Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose

Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose

Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes.

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Bibliographic Details
Main Author: Genetics, University of Wisconsin-Madison (18795079)
Format: Dataset biblioteca
Published: 2011
Subjects:Genetics, Lodderomyces elongisporus NRRL YB-4239, eEukaryotes,
Online Access:https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994
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spelling dat-usda-us-article250789942011-10-20T00:00:00Z Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose Genetics, University of Wisconsin-Madison (18795079) Genetics Lodderomyces elongisporus NRRL YB-4239 eEukaryotes Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes. 2011-10-20T00:00:00Z Dataset Dataset 10113/AF25078994 https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994 Copyright Undetermined
institution USDA US
collection Figshare
country Estados Unidos
countrycode US
component Datos de investigación
access En linea
databasecode dat-usda-us
tag biblioteca
region America del Norte
libraryname National Agricultural Library of USDA
topic Genetics
Lodderomyces elongisporus NRRL YB-4239
eEukaryotes
spellingShingle Genetics
Lodderomyces elongisporus NRRL YB-4239
eEukaryotes
Genetics, University of Wisconsin-Madison (18795079)
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
description Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes.
format Dataset
author Genetics, University of Wisconsin-Madison (18795079)
author_facet Genetics, University of Wisconsin-Madison (18795079)
author_sort Genetics, University of Wisconsin-Madison (18795079)
title Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
title_short Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
title_full Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
title_fullStr Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
title_full_unstemmed Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
title_sort expression analysis of lodderomyces elongisporus nrrl yb-4239 grown in glucose or xylose
publishDate 2011
url https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994
work_keys_str_mv AT geneticsuniversityofwisconsinmadison18795079 expressionanalysisoflodderomyceselongisporusnrrlyb4239growninglucoseorxylose
_version_ 1807158350711881728

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