Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose
Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes.
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Format: | Dataset biblioteca |
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2011
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Subjects: | Genetics, Lodderomyces elongisporus NRRL YB-4239, eEukaryotes, |
Online Access: | https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994 |
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dat-usda-us-article250789942011-10-20T00:00:00Z Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose Genetics, University of Wisconsin-Madison (18795079) Genetics Lodderomyces elongisporus NRRL YB-4239 eEukaryotes Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes. 2011-10-20T00:00:00Z Dataset Dataset 10113/AF25078994 https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994 Copyright Undetermined |
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National Agricultural Library of USDA |
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Genetics Lodderomyces elongisporus NRRL YB-4239 eEukaryotes |
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Genetics Lodderomyces elongisporus NRRL YB-4239 eEukaryotes Genetics, University of Wisconsin-Madison (18795079) Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
description |
Investigation of whole genome gene expression level changes in Lodderomyces elongisporus NRRL YB-4239 grown aerobically in xylose, compared to the same strain grown aerobically in glucose. Overall design: A six array study using total RNA recovered from three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in glucose and three separate cultures of Lodderomyces elongisporus NRRL YB-4239 grown in xylose. Each array measures the expression level of 371,451 probes (average probe length 54.1 +/- 4.1 nt) tiled across the Lodderomyces elongisporus NRRL YB-4239 genome with a median spacing distance of 33 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes. |
format |
Dataset |
author |
Genetics, University of Wisconsin-Madison (18795079) |
author_facet |
Genetics, University of Wisconsin-Madison (18795079) |
author_sort |
Genetics, University of Wisconsin-Madison (18795079) |
title |
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
title_short |
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
title_full |
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
title_fullStr |
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
title_full_unstemmed |
Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose |
title_sort |
expression analysis of lodderomyces elongisporus nrrl yb-4239 grown in glucose or xylose |
publishDate |
2011 |
url |
https://figshare.com/articles/dataset/Expression_analysis_of_Lodderomyces_elongisporus_NRRL_YB-4239_grown_in_glucose_or_xylose/25078994 |
work_keys_str_mv |
AT geneticsuniversityofwisconsinmadison18795079 expressionanalysisoflodderomyceselongisporusnrrlyb4239growninglucoseorxylose |
_version_ |
1807158350711881728 |