Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass

Catalina Salgado-Salazar (17478213); Lisa Beirn (17478960); Bruce B. Clarke (17478963); Jo Anne Crouch (17478222)

Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass

Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus Clarireedia, which includes four species that cause turfgrass dollar spot disease: Clarireedia homoeocarpa, C. bennettii, C. jacksonii, and C. monteithiana. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar Clarireedia isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. <div> Resources in this dataset:</div> <ul><li>Resource Title: DNA sequence alignment, combined dataset. File Name: Allgenes_alignment.txt</li> <li>Resource Title: Phylogenetic tree file. File Name: Allgenes_phylogenyMrBayes.nex.con.tre.txtResource Description: Derived from analysis of DNA sequence alignment</li> <li>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars. File Name: CaM_DS_diagnostic sites.txt</li> <li>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars. File Name: ITS_DS_diagnostic sites.txt</li> <li>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars. File Name: Mcm7_DS_diagnostic sites.txt</li></ul>

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Bibliographic Details
Main Authors:	Catalina Salgado-Salazar (17478213), Lisa Beirn (17478960), Bruce B. Clarke (17478963), Jo Anne Crouch (17478222)
Format:	Dataset biblioteca
Published:	2018
Subjects:	Crop and pasture production, Genetics, turfgrass, phylogenetic, ascomycetous fungi, plant disease, Clarireedia, Clarireedia homoeocarpa, Clarireedia bennettii, Clarireedia jacksonii, Clarireedia monteithiana, NP303, data.gov, ARS,
Online Access:	https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669
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id	dat-usda-us-article24852669
record_format	figshare
spelling	dat-usda-us-article248526692018-03-23T00:00:00Z Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS <p>Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus <em>Clarireedia</em>, which includes four species that cause turfgrass dollar spot disease: <em>Clarireedia homoeocarpa</em>, <em>C. bennettii</em>, <em>C. jacksonii</em>, and <em>C. monteithiana</em>. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar <em>Clarireedia</em> isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: DNA sequence alignment, combined dataset.</p> <p>File Name: Allgenes_alignment.txt</p></li><br><li><p>Resource Title: Phylogenetic tree file.</p> <p>File Name: Allgenes_phylogeny<em>MrBayes.nex</em>.con<em>.tre</em>.txt</p><p>Resource Description: Derived from analysis of DNA sequence alignment</p></li><br><li><p>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars.</p> <p>File Name: CaM_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars.</p> <p>File Name: ITS_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars.</p> <p>File Name: Mcm7_DS_diagnostic sites.txt</p></li></ul><p></p> 2018-03-23T00:00:00Z Dataset Dataset 10.15482/usda.adc/1429061 https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669 U.S. Public Domain
institution	USDA US
collection	Figshare
country	Estados Unidos
countrycode	US
component	Datos de investigación
access	En linea
databasecode	dat-usda-us
tag	biblioteca
region	America del Norte
libraryname	National Agricultural Library of USDA
topic	Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS
spellingShingle	Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
description	<p>Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus <em>Clarireedia</em>, which includes four species that cause turfgrass dollar spot disease: <em>Clarireedia homoeocarpa</em>, <em>C. bennettii</em>, <em>C. jacksonii</em>, and <em>C. monteithiana</em>. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar <em>Clarireedia</em> isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: DNA sequence alignment, combined dataset.</p> <p>File Name: Allgenes_alignment.txt</p></li><br><li><p>Resource Title: Phylogenetic tree file.</p> <p>File Name: Allgenes_phylogeny<em>MrBayes.nex</em>.con<em>.tre</em>.txt</p><p>Resource Description: Derived from analysis of DNA sequence alignment</p></li><br><li><p>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars.</p> <p>File Name: CaM_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars.</p> <p>File Name: ITS_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars.</p> <p>File Name: Mcm7_DS_diagnostic sites.txt</p></li></ul><p></p>
format	Dataset
author	Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222)
author_facet	Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222)
author_sort	Catalina Salgado-Salazar (17478213)
title	Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
title_short	Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
title_full	Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
title_fullStr	Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
title_full_unstemmed	Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
title_sort	data from: clarireedia: a new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
publishDate	2018
url	https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669
work_keys_str_mv	AT catalinasalgadosalazar17478213 datafromclarireediaanewfungalgenuscomprisingfourpathogenicspeciesresponsiblefordollarspotdiseaseofturfgrass AT lisabeirn17478960 datafromclarireediaanewfungalgenuscomprisingfourpathogenicspeciesresponsiblefordollarspotdiseaseofturfgrass AT brucebclarke17478963 datafromclarireediaanewfungalgenuscomprisingfourpathogenicspeciesresponsiblefordollarspotdiseaseofturfgrass AT joannecrouch17478222 datafromclarireediaanewfungalgenuscomprisingfourpathogenicspeciesresponsiblefordollarspotdiseaseofturfgrass
_version_	1807158868784971776

Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass

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