Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass
<p>Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus <em>Clarireedia</em>, which includes four species that cause turfgrass dollar spot disease: <em>Clarireedia homoeocarpa</em>, <em>C. bennettii</em>, <em>C. jacksonii</em>, and <em>C. monteithiana</em>. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar <em>Clarireedia</em> isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: DNA sequence alignment, combined dataset.</p> <p>File Name: Allgenes_alignment.txt</p></li><br><li><p>Resource Title: Phylogenetic tree file.</p> <p>File Name: Allgenes_phylogeny<em>MrBayes.nex</em>.con<em>.tre</em>.txt</p><p>Resource Description: Derived from analysis of DNA sequence alignment</p></li><br><li><p>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars.</p> <p>File Name: CaM_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars.</p> <p>File Name: ITS_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars.</p> <p>File Name: Mcm7_DS_diagnostic sites.txt</p></li></ul><p></p>
Main Authors: | , , , |
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Format: | Dataset biblioteca |
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2018
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Subjects: | Crop and pasture production, Genetics, turfgrass, phylogenetic, ascomycetous fungi, plant disease, Clarireedia, Clarireedia homoeocarpa, Clarireedia bennettii, Clarireedia jacksonii, Clarireedia monteithiana, NP303, data.gov, ARS, |
Online Access: | https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669 |
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dat-usda-us-article248526692018-03-23T00:00:00Z Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS <p>Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus <em>Clarireedia</em>, which includes four species that cause turfgrass dollar spot disease: <em>Clarireedia homoeocarpa</em>, <em>C. bennettii</em>, <em>C. jacksonii</em>, and <em>C. monteithiana</em>. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar <em>Clarireedia</em> isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: DNA sequence alignment, combined dataset.</p> <p>File Name: Allgenes_alignment.txt</p></li><br><li><p>Resource Title: Phylogenetic tree file.</p> <p>File Name: Allgenes_phylogeny<em>MrBayes.nex</em>.con<em>.tre</em>.txt</p><p>Resource Description: Derived from analysis of DNA sequence alignment</p></li><br><li><p>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars.</p> <p>File Name: CaM_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars.</p> <p>File Name: ITS_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars.</p> <p>File Name: Mcm7_DS_diagnostic sites.txt</p></li></ul><p></p> 2018-03-23T00:00:00Z Dataset Dataset 10.15482/usda.adc/1429061 https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669 U.S. Public Domain |
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Estados Unidos |
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US |
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biblioteca |
region |
America del Norte |
libraryname |
National Agricultural Library of USDA |
topic |
Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS |
spellingShingle |
Crop and pasture production Genetics turfgrass phylogenetic ascomycetous fungi plant disease Clarireedia Clarireedia homoeocarpa Clarireedia bennettii Clarireedia jacksonii Clarireedia monteithiana NP303 data.gov ARS Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
description |
<p>Dollar spot is one of the most destructive globally distributed diseases of turfgrass. The identity of the fungus responsible for the disease has been the subject of debate for more than 75 years. These datasets provide the phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7) that underlie the establishment of the new fungal genus <em>Clarireedia</em>, which includes four species that cause turfgrass dollar spot disease: <em>Clarireedia homoeocarpa</em>, <em>C. bennettii</em>, <em>C. jacksonii</em>, and <em>C. monteithiana</em>. Datasets include the DNA sequence alignments for the CaM, ITS and Mcm7 markers for exemplar <em>Clarireedia</em> isolates, and the complete combined phylogenetic dataset and phylogenetic tree file. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: DNA sequence alignment, combined dataset.</p> <p>File Name: Allgenes_alignment.txt</p></li><br><li><p>Resource Title: Phylogenetic tree file.</p> <p>File Name: Allgenes_phylogeny<em>MrBayes.nex</em>.con<em>.tre</em>.txt</p><p>Resource Description: Derived from analysis of DNA sequence alignment</p></li><br><li><p>Resource Title: DNA sequence alignment of CaM marker for dollar spot fungi exemplars.</p> <p>File Name: CaM_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of ITS marker for dollar spot fungi exemplars.</p> <p>File Name: ITS_DS_diagnostic sites.txt</p></li><br><li><p>Resource Title: DNA sequence alignment of Mcm7 marker for dollar spot fungi exemplars.</p> <p>File Name: Mcm7_DS_diagnostic sites.txt</p></li></ul><p></p> |
format |
Dataset |
author |
Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) |
author_facet |
Catalina Salgado-Salazar (17478213) Lisa Beirn (17478960) Bruce B. Clarke (17478963) Jo Anne Crouch (17478222) |
author_sort |
Catalina Salgado-Salazar (17478213) |
title |
Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
title_short |
Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
title_full |
Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
title_fullStr |
Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
title_full_unstemmed |
Data from: Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
title_sort |
data from: clarireedia: a new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass |
publishDate |
2018 |
url |
https://figshare.com/articles/dataset/Data_from_Clarireedia_A_new_fungal_genus_comprising_four_pathogenic_species_responsible_for_dollar_spot_disease_of_turfgrass/24852669 |
work_keys_str_mv |
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_version_ |
1807158868784971776 |