Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing

<p>THIS DATA HAS BEEN UPDATED: PLEASE SEE <a href="http://dx.doi.org/10.15482/USDA.ADC/1503958">http://dx.doi.org/10.15482/USDA.ADC/1503958</a> FOR THE UPDATED VERSION.</p> <p>Gene models for protein-coding genes in the genome of the rice coral Montipora capitata, Hawaii Island. Annotation was performed with Augustus v3.3.1, using RNA-seq data as extrinsic evidence. Gene structures (.gff), coding sequences (_cds.fas), and amino acid sequences (_aa.fas) are provided. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Montipora capitata gene models v1.0, amino acid sequence.</p> <p>File Name: Mcap_genemodels_1.0_aa.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, coding sequence.</p> <p>File Name: Mcap_genemodels_1.0_cds.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, gene structure (GFF).</p> <p>File Name: Mcap_genemodels_1.0.gff</p></li></ul><p></p>

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Bibliographic Details
Main Authors: Martin Helmkampf (17480229), M. Renee Bellinger (17480232), Scott M. Geib (17477535), Sheina B. Sim (17480235), Misaki Takabayashi (17480238)
Format: Dataset biblioteca
Published: 2018
Subjects:Genetics, Gene expression (incl. microarray and other genome-wide approaches), coral, genome assembly, gene annotation, Montipora capitata, Hawaii, gene models, linked-read sequencing,
Online Access:https://figshare.com/articles/dataset/Data_from_Draft_genome_of_the_rice_coral_Montipora_capitata_obtained_from_linked-read_sequencing/24663012
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spelling dat-usda-us-article246630122018-10-22T00:00:00Z Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing Martin Helmkampf (17480229) M. Renee Bellinger (17480232) Scott M. Geib (17477535) Sheina B. Sim (17480235) Misaki Takabayashi (17480238) Genetics Gene expression (incl. microarray and other genome-wide approaches) coral genome assembly gene annotation Montipora capitata Hawaii gene models linked-read sequencing <p>THIS DATA HAS BEEN UPDATED: PLEASE SEE <a href="http://dx.doi.org/10.15482/USDA.ADC/1503958">http://dx.doi.org/10.15482/USDA.ADC/1503958</a> FOR THE UPDATED VERSION.</p> <p>Gene models for protein-coding genes in the genome of the rice coral Montipora capitata, Hawaii Island. Annotation was performed with Augustus v3.3.1, using RNA-seq data as extrinsic evidence. Gene structures (.gff), coding sequences (_cds.fas), and amino acid sequences (_aa.fas) are provided. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Montipora capitata gene models v1.0, amino acid sequence.</p> <p>File Name: Mcap_genemodels_1.0_aa.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, coding sequence.</p> <p>File Name: Mcap_genemodels_1.0_cds.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, gene structure (GFF).</p> <p>File Name: Mcap_genemodels_1.0.gff</p></li></ul><p></p> 2018-10-22T00:00:00Z Dataset Dataset 10.15482/usda.adc/1478412 https://figshare.com/articles/dataset/Data_from_Draft_genome_of_the_rice_coral_Montipora_capitata_obtained_from_linked-read_sequencing/24663012 U.S. Public Domain
institution USDA US
collection Figshare
country Estados Unidos
countrycode US
component Datos de investigación
access En linea
databasecode dat-usda-us
tag biblioteca
region America del Norte
libraryname National Agricultural Library of USDA
topic Genetics
Gene expression (incl. microarray and other genome-wide approaches)
coral
genome assembly
gene annotation
Montipora capitata
Hawaii
gene models
linked-read sequencing
spellingShingle Genetics
Gene expression (incl. microarray and other genome-wide approaches)
coral
genome assembly
gene annotation
Montipora capitata
Hawaii
gene models
linked-read sequencing
Martin Helmkampf (17480229)
M. Renee Bellinger (17480232)
Scott M. Geib (17477535)
Sheina B. Sim (17480235)
Misaki Takabayashi (17480238)
Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
description <p>THIS DATA HAS BEEN UPDATED: PLEASE SEE <a href="http://dx.doi.org/10.15482/USDA.ADC/1503958">http://dx.doi.org/10.15482/USDA.ADC/1503958</a> FOR THE UPDATED VERSION.</p> <p>Gene models for protein-coding genes in the genome of the rice coral Montipora capitata, Hawaii Island. Annotation was performed with Augustus v3.3.1, using RNA-seq data as extrinsic evidence. Gene structures (.gff), coding sequences (_cds.fas), and amino acid sequences (_aa.fas) are provided. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Montipora capitata gene models v1.0, amino acid sequence.</p> <p>File Name: Mcap_genemodels_1.0_aa.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, coding sequence.</p> <p>File Name: Mcap_genemodels_1.0_cds.fas</p></li><br><li><p>Resource Title: Montipora capitata gene models v1.0, gene structure (GFF).</p> <p>File Name: Mcap_genemodels_1.0.gff</p></li></ul><p></p>
format Dataset
author Martin Helmkampf (17480229)
M. Renee Bellinger (17480232)
Scott M. Geib (17477535)
Sheina B. Sim (17480235)
Misaki Takabayashi (17480238)
author_facet Martin Helmkampf (17480229)
M. Renee Bellinger (17480232)
Scott M. Geib (17477535)
Sheina B. Sim (17480235)
Misaki Takabayashi (17480238)
author_sort Martin Helmkampf (17480229)
title Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
title_short Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
title_full Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
title_fullStr Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
title_full_unstemmed Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing
title_sort data from: draft genome of the rice coral montipora capitata obtained from linked-read sequencing
publishDate 2018
url https://figshare.com/articles/dataset/Data_from_Draft_genome_of_the_rice_coral_Montipora_capitata_obtained_from_linked-read_sequencing/24663012
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