Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee

The Amplified Fragment Length Polymorphism (AFLP) technique was used to assess the genetic diversity of B. bassiana isolates obtained from Hypothenemus hampei and Leucoptera coffeella from different regions in Nicaragua. A total of 48 isolates were analyzed using six primer combinations. Estimates of genetic similarities were obtained by the Dice coefficient, and a final dendrogram was constructed with the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) method. Principal Coordinate (PCO)analysis was performed to clasify the relationtship between isolates. Variation among and within regions, host and the year of collection was studied by Analysis of Molecular Variance (AMOVA). The year of collection showed 67.2% of variance within groups (isolates collected in 2004, 2000 and 1988-1993)and 32.8% of variance among groups. Low levels of genetic differentiation were observed, indicating a high level of gene flow between the regions (Fst=0.15), host species (Fst=0.068) and the year of collection (Fst=0.328).

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Main Authors: 64743 Elameen, A., 83369 Klingen, I., 83339 Klemsdal, S.S., 95785 Monzón, A.J., 95778 Monzón Centeno, A.J., 15193 Norwegian University of Life Science, Aas (Noruega), 15191 Norwegian Institute for Agricultural and Environmental Research, Hogskoleveien (Noruega), 3909 CATIE, Managua (Nicaragua). Proyecto MIP, 19844 Universidad Nacional Agraria, Managua (Nicaragua)
Format: biblioteca
Published: Hogskoloveien (Noruega) 2007
Subjects:COFFEA ARABICA, HYPOTHENEMUS HAMPEI, HONGOS ENTOMOPATOGENOS, HUESPEDES, POLIMORFISMO, FLUJO GENETICO, TECNICAS DE AISLAMIENTO, METODOS ESTADISTICOS, NICARAGUA,
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spelling KOHA-OAI-BVE:1236272020-02-03T22:39:52ZGenetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffeeInsect pathogenic fungi in Hypothenemus hampei, Leucoptera coffeella and in the soil in coffe plantations in Central America: natural occurrence, management system and genetic diversity 64743 Elameen, A. 83369 Klingen, I. 83339 Klemsdal, S.S. 95785 Monzón, A.J. 95778 Monzón Centeno, A.J. 15193 Norwegian University of Life Science, Aas (Noruega) 15191 Norwegian Institute for Agricultural and Environmental Research, Hogskoleveien (Noruega) 3909 CATIE, Managua (Nicaragua). Proyecto MIP 19844 Universidad Nacional Agraria, Managua (Nicaragua) Hogskoloveien (Noruega)20072007The Amplified Fragment Length Polymorphism (AFLP) technique was used to assess the genetic diversity of B. bassiana isolates obtained from Hypothenemus hampei and Leucoptera coffeella from different regions in Nicaragua. A total of 48 isolates were analyzed using six primer combinations. Estimates of genetic similarities were obtained by the Dice coefficient, and a final dendrogram was constructed with the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) method. Principal Coordinate (PCO)analysis was performed to clasify the relationtship between isolates. Variation among and within regions, host and the year of collection was studied by Analysis of Molecular Variance (AMOVA). The year of collection showed 67.2% of variance within groups (isolates collected in 2004, 2000 and 1988-1993)and 32.8% of variance among groups. Low levels of genetic differentiation were observed, indicating a high level of gene flow between the regions (Fst=0.15), host species (Fst=0.068) and the year of collection (Fst=0.328).The Amplified Fragment Length Polymorphism (AFLP) technique was used to assess the genetic diversity of B. bassiana isolates obtained from Hypothenemus hampei and Leucoptera coffeella from different regions in Nicaragua. A total of 48 isolates were analyzed using six primer combinations. Estimates of genetic similarities were obtained by the Dice coefficient, and a final dendrogram was constructed with the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) method. Principal Coordinate (PCO)analysis was performed to clasify the relationtship between isolates. Variation among and within regions, host and the year of collection was studied by Analysis of Molecular Variance (AMOVA). The year of collection showed 67.2% of variance within groups (isolates collected in 2004, 2000 and 1988-1993)and 32.8% of variance among groups. Low levels of genetic differentiation were observed, indicating a high level of gene flow between the regions (Fst=0.15), host species (Fst=0.068) and the year of collection (Fst=0.328).COFFEA ARABICAHYPOTHENEMUS HAMPEIHONGOS ENTOMOPATOGENOSHUESPEDESPOLIMORFISMOFLUJO GENETICOTECNICAS DE AISLAMIENTOMETODOS ESTADISTICOSNICARAGUAURN:ISBN:9788257507862
institution IICA
collection Koha
country Costa Rica
countrycode CR
component Bibliográfico
access En linea
Fisico
databasecode cat-sibiica
tag biblioteca
region America Central
libraryname Sistema de Bibliotecas IICA/CATIE
topic COFFEA ARABICA
HYPOTHENEMUS HAMPEI
HONGOS ENTOMOPATOGENOS
HUESPEDES
POLIMORFISMO
FLUJO GENETICO
TECNICAS DE AISLAMIENTO
METODOS ESTADISTICOS
NICARAGUA
COFFEA ARABICA
HYPOTHENEMUS HAMPEI
HONGOS ENTOMOPATOGENOS
HUESPEDES
POLIMORFISMO
FLUJO GENETICO
TECNICAS DE AISLAMIENTO
METODOS ESTADISTICOS
NICARAGUA
spellingShingle COFFEA ARABICA
HYPOTHENEMUS HAMPEI
HONGOS ENTOMOPATOGENOS
HUESPEDES
POLIMORFISMO
FLUJO GENETICO
TECNICAS DE AISLAMIENTO
METODOS ESTADISTICOS
NICARAGUA
COFFEA ARABICA
HYPOTHENEMUS HAMPEI
HONGOS ENTOMOPATOGENOS
HUESPEDES
POLIMORFISMO
FLUJO GENETICO
TECNICAS DE AISLAMIENTO
METODOS ESTADISTICOS
NICARAGUA
64743 Elameen, A.
83369 Klingen, I.
83339 Klemsdal, S.S.
95785 Monzón, A.J.
95778 Monzón Centeno, A.J.
15193 Norwegian University of Life Science, Aas (Noruega)
15191 Norwegian Institute for Agricultural and Environmental Research, Hogskoleveien (Noruega)
3909 CATIE, Managua (Nicaragua). Proyecto MIP
19844 Universidad Nacional Agraria, Managua (Nicaragua)
Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
description The Amplified Fragment Length Polymorphism (AFLP) technique was used to assess the genetic diversity of B. bassiana isolates obtained from Hypothenemus hampei and Leucoptera coffeella from different regions in Nicaragua. A total of 48 isolates were analyzed using six primer combinations. Estimates of genetic similarities were obtained by the Dice coefficient, and a final dendrogram was constructed with the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) method. Principal Coordinate (PCO)analysis was performed to clasify the relationtship between isolates. Variation among and within regions, host and the year of collection was studied by Analysis of Molecular Variance (AMOVA). The year of collection showed 67.2% of variance within groups (isolates collected in 2004, 2000 and 1988-1993)and 32.8% of variance among groups. Low levels of genetic differentiation were observed, indicating a high level of gene flow between the regions (Fst=0.15), host species (Fst=0.068) and the year of collection (Fst=0.328).
format
topic_facet COFFEA ARABICA
HYPOTHENEMUS HAMPEI
HONGOS ENTOMOPATOGENOS
HUESPEDES
POLIMORFISMO
FLUJO GENETICO
TECNICAS DE AISLAMIENTO
METODOS ESTADISTICOS
NICARAGUA
author 64743 Elameen, A.
83369 Klingen, I.
83339 Klemsdal, S.S.
95785 Monzón, A.J.
95778 Monzón Centeno, A.J.
15193 Norwegian University of Life Science, Aas (Noruega)
15191 Norwegian Institute for Agricultural and Environmental Research, Hogskoleveien (Noruega)
3909 CATIE, Managua (Nicaragua). Proyecto MIP
19844 Universidad Nacional Agraria, Managua (Nicaragua)
author_facet 64743 Elameen, A.
83369 Klingen, I.
83339 Klemsdal, S.S.
95785 Monzón, A.J.
95778 Monzón Centeno, A.J.
15193 Norwegian University of Life Science, Aas (Noruega)
15191 Norwegian Institute for Agricultural and Environmental Research, Hogskoleveien (Noruega)
3909 CATIE, Managua (Nicaragua). Proyecto MIP
19844 Universidad Nacional Agraria, Managua (Nicaragua)
author_sort 64743 Elameen, A.
title Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
title_short Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
title_full Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
title_fullStr Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
title_full_unstemmed Genetic diversity of Beauveria bassiana isolates in Hypothenemus hampei and Leucoptera coffeella populations in coffee
title_sort genetic diversity of beauveria bassiana isolates in hypothenemus hampei and leucoptera coffeella populations in coffee
publisher Hogskoloveien (Noruega)
publishDate 2007
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