Quinoa phenotyping methodologies: An international consensus

Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher-throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally.

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Main Authors: Stanschewski, Clara S., Rey, Elodie, Fiene, Gabriele, Craine, Evan B., Wellman, Gordon, Melino, Vanessa J., Patiranage, Dilan S.R., Johansen, Kasper, Schmöckel, Sandra M., Bertero, Hector Daniel, Oakey, Helena, Colque‐Little, Carla, Afzal, Irfan, Raubach, Sebastian, Miller, Nathan, Streich, Jared, Buchvaldt Amby, Daniel, Emrani, Nazgol, Warmington, Mark, Moussa, Magdi A.A., Wu, David, Jacobson, Daniel, Andreasen, Christian, Jung, Christian, Murphy, Kevin, Bazile, Didier, Tester, Mark
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, phénotype, Chenopodium quinoa, variation génétique, plasticité phénotypique, amélioration des cultures, http://aims.fao.org/aos/agrovoc/c_5776, http://aims.fao.org/aos/agrovoc/c_1531, http://aims.fao.org/aos/agrovoc/c_15975, http://aims.fao.org/aos/agrovoc/c_12386358, http://aims.fao.org/aos/agrovoc/c_331560,
Online Access:http://agritrop.cirad.fr/598979/
http://agritrop.cirad.fr/598979/1/Stanschewski%20et%20al-2021_plants-10-01759_Quinoa%20Phenotyping%20Methodologies%20-%20An%20International%20Consensus.pdf
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spelling dig-cirad-fr-5989792024-01-29T03:42:45Z http://agritrop.cirad.fr/598979/ http://agritrop.cirad.fr/598979/ Quinoa phenotyping methodologies: An international consensus. Stanschewski Clara S., Rey Elodie, Fiene Gabriele, Craine Evan B., Wellman Gordon, Melino Vanessa J., Patiranage Dilan S.R., Johansen Kasper, Schmöckel Sandra M., Bertero Hector Daniel, Oakey Helena, Colque‐Little Carla, Afzal Irfan, Raubach Sebastian, Miller Nathan, Streich Jared, Buchvaldt Amby Daniel, Emrani Nazgol, Warmington Mark, Moussa Magdi A.A., Wu David, Jacobson Daniel, Andreasen Christian, Jung Christian, Murphy Kevin, Bazile Didier, Tester Mark. 2021. Plants, 10 (9):1759, 54 p.https://doi.org/10.3390/plants10091759 <https://doi.org/10.3390/plants10091759> Quinoa phenotyping methodologies: An international consensus Stanschewski, Clara S. Rey, Elodie Fiene, Gabriele Craine, Evan B. Wellman, Gordon Melino, Vanessa J. Patiranage, Dilan S.R. Johansen, Kasper Schmöckel, Sandra M. Bertero, Hector Daniel Oakey, Helena Colque‐Little, Carla Afzal, Irfan Raubach, Sebastian Miller, Nathan Streich, Jared Buchvaldt Amby, Daniel Emrani, Nazgol Warmington, Mark Moussa, Magdi A.A. Wu, David Jacobson, Daniel Andreasen, Christian Jung, Christian Murphy, Kevin Bazile, Didier Tester, Mark eng 2021 Plants F30 - Génétique et amélioration des plantes phénotype Chenopodium quinoa variation génétique plasticité phénotypique amélioration des cultures http://aims.fao.org/aos/agrovoc/c_5776 http://aims.fao.org/aos/agrovoc/c_1531 http://aims.fao.org/aos/agrovoc/c_15975 http://aims.fao.org/aos/agrovoc/c_12386358 http://aims.fao.org/aos/agrovoc/c_331560 Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher-throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/598979/1/Stanschewski%20et%20al-2021_plants-10-01759_Quinoa%20Phenotyping%20Methodologies%20-%20An%20International%20Consensus.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.3390/plants10091759 10.3390/plants10091759 info:eu-repo/semantics/altIdentifier/doi/10.3390/plants10091759 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.3390/plants10091759
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
phénotype
Chenopodium quinoa
variation génétique
plasticité phénotypique
amélioration des cultures
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_1531
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_12386358
http://aims.fao.org/aos/agrovoc/c_331560
F30 - Génétique et amélioration des plantes
phénotype
Chenopodium quinoa
variation génétique
plasticité phénotypique
amélioration des cultures
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_1531
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_12386358
http://aims.fao.org/aos/agrovoc/c_331560
spellingShingle F30 - Génétique et amélioration des plantes
phénotype
Chenopodium quinoa
variation génétique
plasticité phénotypique
amélioration des cultures
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_1531
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_12386358
http://aims.fao.org/aos/agrovoc/c_331560
F30 - Génétique et amélioration des plantes
phénotype
Chenopodium quinoa
variation génétique
plasticité phénotypique
amélioration des cultures
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_1531
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_12386358
http://aims.fao.org/aos/agrovoc/c_331560
Stanschewski, Clara S.
Rey, Elodie
Fiene, Gabriele
Craine, Evan B.
Wellman, Gordon
Melino, Vanessa J.
Patiranage, Dilan S.R.
Johansen, Kasper
Schmöckel, Sandra M.
Bertero, Hector Daniel
Oakey, Helena
Colque‐Little, Carla
Afzal, Irfan
Raubach, Sebastian
Miller, Nathan
Streich, Jared
Buchvaldt Amby, Daniel
Emrani, Nazgol
Warmington, Mark
Moussa, Magdi A.A.
Wu, David
Jacobson, Daniel
Andreasen, Christian
Jung, Christian
Murphy, Kevin
Bazile, Didier
Tester, Mark
Quinoa phenotyping methodologies: An international consensus
description Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher-throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally.
format article
topic_facet F30 - Génétique et amélioration des plantes
phénotype
Chenopodium quinoa
variation génétique
plasticité phénotypique
amélioration des cultures
http://aims.fao.org/aos/agrovoc/c_5776
http://aims.fao.org/aos/agrovoc/c_1531
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_12386358
http://aims.fao.org/aos/agrovoc/c_331560
author Stanschewski, Clara S.
Rey, Elodie
Fiene, Gabriele
Craine, Evan B.
Wellman, Gordon
Melino, Vanessa J.
Patiranage, Dilan S.R.
Johansen, Kasper
Schmöckel, Sandra M.
Bertero, Hector Daniel
Oakey, Helena
Colque‐Little, Carla
Afzal, Irfan
Raubach, Sebastian
Miller, Nathan
Streich, Jared
Buchvaldt Amby, Daniel
Emrani, Nazgol
Warmington, Mark
Moussa, Magdi A.A.
Wu, David
Jacobson, Daniel
Andreasen, Christian
Jung, Christian
Murphy, Kevin
Bazile, Didier
Tester, Mark
author_facet Stanschewski, Clara S.
Rey, Elodie
Fiene, Gabriele
Craine, Evan B.
Wellman, Gordon
Melino, Vanessa J.
Patiranage, Dilan S.R.
Johansen, Kasper
Schmöckel, Sandra M.
Bertero, Hector Daniel
Oakey, Helena
Colque‐Little, Carla
Afzal, Irfan
Raubach, Sebastian
Miller, Nathan
Streich, Jared
Buchvaldt Amby, Daniel
Emrani, Nazgol
Warmington, Mark
Moussa, Magdi A.A.
Wu, David
Jacobson, Daniel
Andreasen, Christian
Jung, Christian
Murphy, Kevin
Bazile, Didier
Tester, Mark
author_sort Stanschewski, Clara S.
title Quinoa phenotyping methodologies: An international consensus
title_short Quinoa phenotyping methodologies: An international consensus
title_full Quinoa phenotyping methodologies: An international consensus
title_fullStr Quinoa phenotyping methodologies: An international consensus
title_full_unstemmed Quinoa phenotyping methodologies: An international consensus
title_sort quinoa phenotyping methodologies: an international consensus
url http://agritrop.cirad.fr/598979/
http://agritrop.cirad.fr/598979/1/Stanschewski%20et%20al-2021_plants-10-01759_Quinoa%20Phenotyping%20Methodologies%20-%20An%20International%20Consensus.pdf
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