Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands

Premise of the study: Polymorphic markers were required for a native tree of the Mascarene Islands, Foetidia mauritiana (Lecythidaceae), to investigate the effects of fragmentation of lowland tropical habitats on tree mating systems and on gene flow. Methods and Results: Using microsatellite enrichment and next-generation sequencing, we identified 13 microsatellite loci (dinucleotide repeats). They were highly polymorphic in 121 trees sampled in the largest three populations on Réunion, revealing 2–17 different alleles per locus. Furthermore, they were found to be polymorphic in conspecific populations on Mauritius and in F. rodriguesiana from Rodrigues. Conclusions: These results indicate the utility of these markers to investigate genetic diversity, mating systems, and gene flow in a genus native to the biodiversity hotspot of Madagascar and the Indian Ocean islands.

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Main Authors: Martos, Florent, Lebreton, Gérard, Rivière, Eric, Humeau, Laurence, Chevallier, Marie-Hélène
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, K01 - Foresterie - Considérations générales, F40 - Écologie végétale, F70 - Taxonomie végétale et phytogéographie, Lecythidaceae, polymorphisme génétique, flux de gènes, identification, flore, biodiversité, forêt, marqueur génétique, allèle, organisme indigène, écosystème forestier, distribution géographique, http://aims.fao.org/aos/agrovoc/c_4247, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_37331, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_2983, http://aims.fao.org/aos/agrovoc/c_33949, http://aims.fao.org/aos/agrovoc/c_3062, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_8724, http://aims.fao.org/aos/agrovoc/c_34268, http://aims.fao.org/aos/agrovoc/c_1374842133961, http://aims.fao.org/aos/agrovoc/c_5083, http://aims.fao.org/aos/agrovoc/c_4510,
Online Access:http://agritrop.cirad.fr/581440/
http://agritrop.cirad.fr/581440/1/martos.pdf
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spelling dig-cirad-fr-5814402024-01-28T23:39:48Z http://agritrop.cirad.fr/581440/ http://agritrop.cirad.fr/581440/ Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands. Martos Florent, Lebreton Gérard, Rivière Eric, Humeau Laurence, Chevallier Marie-Hélène. 2016. Applications in Plant Sciences, 4 (8):e1600034, 4 p.https://doi.org/10.3732/apps.1600034 <https://doi.org/10.3732/apps.1600034> Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands Martos, Florent Lebreton, Gérard Rivière, Eric Humeau, Laurence Chevallier, Marie-Hélène eng 2016 Applications in Plant Sciences F30 - Génétique et amélioration des plantes K01 - Foresterie - Considérations générales F40 - Écologie végétale F70 - Taxonomie végétale et phytogéographie Lecythidaceae polymorphisme génétique flux de gènes identification flore biodiversité forêt marqueur génétique allèle organisme indigène écosystème forestier distribution géographique http://aims.fao.org/aos/agrovoc/c_4247 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_37331 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_8724 http://aims.fao.org/aos/agrovoc/c_34268 http://aims.fao.org/aos/agrovoc/c_1374842133961 http://aims.fao.org/aos/agrovoc/c_5083 Madagascar http://aims.fao.org/aos/agrovoc/c_4510 Premise of the study: Polymorphic markers were required for a native tree of the Mascarene Islands, Foetidia mauritiana (Lecythidaceae), to investigate the effects of fragmentation of lowland tropical habitats on tree mating systems and on gene flow. Methods and Results: Using microsatellite enrichment and next-generation sequencing, we identified 13 microsatellite loci (dinucleotide repeats). They were highly polymorphic in 121 trees sampled in the largest three populations on Réunion, revealing 2–17 different alleles per locus. Furthermore, they were found to be polymorphic in conspecific populations on Mauritius and in F. rodriguesiana from Rodrigues. Conclusions: These results indicate the utility of these markers to investigate genetic diversity, mating systems, and gene flow in a genus native to the biodiversity hotspot of Madagascar and the Indian Ocean islands. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/581440/1/martos.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.3732/apps.1600034 10.3732/apps.1600034 info:eu-repo/semantics/altIdentifier/doi/10.3732/apps.1600034 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.3732/apps.1600034
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
K01 - Foresterie - Considérations générales
F40 - Écologie végétale
F70 - Taxonomie végétale et phytogéographie
Lecythidaceae
polymorphisme génétique
flux de gènes
identification
flore
biodiversité
forêt
marqueur génétique
allèle
organisme indigène
écosystème forestier
distribution géographique
http://aims.fao.org/aos/agrovoc/c_4247
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_37331
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_2983
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_8724
http://aims.fao.org/aos/agrovoc/c_34268
http://aims.fao.org/aos/agrovoc/c_1374842133961
http://aims.fao.org/aos/agrovoc/c_5083
http://aims.fao.org/aos/agrovoc/c_4510
F30 - Génétique et amélioration des plantes
K01 - Foresterie - Considérations générales
F40 - Écologie végétale
F70 - Taxonomie végétale et phytogéographie
Lecythidaceae
polymorphisme génétique
flux de gènes
identification
flore
biodiversité
forêt
marqueur génétique
allèle
organisme indigène
écosystème forestier
distribution géographique
http://aims.fao.org/aos/agrovoc/c_4247
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_37331
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_2983
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_8724
http://aims.fao.org/aos/agrovoc/c_34268
http://aims.fao.org/aos/agrovoc/c_1374842133961
http://aims.fao.org/aos/agrovoc/c_5083
http://aims.fao.org/aos/agrovoc/c_4510
spellingShingle F30 - Génétique et amélioration des plantes
K01 - Foresterie - Considérations générales
F40 - Écologie végétale
F70 - Taxonomie végétale et phytogéographie
Lecythidaceae
polymorphisme génétique
flux de gènes
identification
flore
biodiversité
forêt
marqueur génétique
allèle
organisme indigène
écosystème forestier
distribution géographique
http://aims.fao.org/aos/agrovoc/c_4247
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_37331
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_2983
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_8724
http://aims.fao.org/aos/agrovoc/c_34268
http://aims.fao.org/aos/agrovoc/c_1374842133961
http://aims.fao.org/aos/agrovoc/c_5083
http://aims.fao.org/aos/agrovoc/c_4510
F30 - Génétique et amélioration des plantes
K01 - Foresterie - Considérations générales
F40 - Écologie végétale
F70 - Taxonomie végétale et phytogéographie
Lecythidaceae
polymorphisme génétique
flux de gènes
identification
flore
biodiversité
forêt
marqueur génétique
allèle
organisme indigène
écosystème forestier
distribution géographique
http://aims.fao.org/aos/agrovoc/c_4247
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_37331
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_2983
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_8724
http://aims.fao.org/aos/agrovoc/c_34268
http://aims.fao.org/aos/agrovoc/c_1374842133961
http://aims.fao.org/aos/agrovoc/c_5083
http://aims.fao.org/aos/agrovoc/c_4510
Martos, Florent
Lebreton, Gérard
Rivière, Eric
Humeau, Laurence
Chevallier, Marie-Hélène
Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
description Premise of the study: Polymorphic markers were required for a native tree of the Mascarene Islands, Foetidia mauritiana (Lecythidaceae), to investigate the effects of fragmentation of lowland tropical habitats on tree mating systems and on gene flow. Methods and Results: Using microsatellite enrichment and next-generation sequencing, we identified 13 microsatellite loci (dinucleotide repeats). They were highly polymorphic in 121 trees sampled in the largest three populations on Réunion, revealing 2–17 different alleles per locus. Furthermore, they were found to be polymorphic in conspecific populations on Mauritius and in F. rodriguesiana from Rodrigues. Conclusions: These results indicate the utility of these markers to investigate genetic diversity, mating systems, and gene flow in a genus native to the biodiversity hotspot of Madagascar and the Indian Ocean islands.
format article
topic_facet F30 - Génétique et amélioration des plantes
K01 - Foresterie - Considérations générales
F40 - Écologie végétale
F70 - Taxonomie végétale et phytogéographie
Lecythidaceae
polymorphisme génétique
flux de gènes
identification
flore
biodiversité
forêt
marqueur génétique
allèle
organisme indigène
écosystème forestier
distribution géographique
http://aims.fao.org/aos/agrovoc/c_4247
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_37331
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_2983
http://aims.fao.org/aos/agrovoc/c_33949
http://aims.fao.org/aos/agrovoc/c_3062
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_8724
http://aims.fao.org/aos/agrovoc/c_34268
http://aims.fao.org/aos/agrovoc/c_1374842133961
http://aims.fao.org/aos/agrovoc/c_5083
http://aims.fao.org/aos/agrovoc/c_4510
author Martos, Florent
Lebreton, Gérard
Rivière, Eric
Humeau, Laurence
Chevallier, Marie-Hélène
author_facet Martos, Florent
Lebreton, Gérard
Rivière, Eric
Humeau, Laurence
Chevallier, Marie-Hélène
author_sort Martos, Florent
title Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
title_short Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
title_full Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
title_fullStr Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
title_full_unstemmed Microsatellites in the tree Foetidia mauritiana (Lecythidaceae) and utility in other Foetidia taxa from the Mascarene Islands
title_sort microsatellites in the tree foetidia mauritiana (lecythidaceae) and utility in other foetidia taxa from the mascarene islands
url http://agritrop.cirad.fr/581440/
http://agritrop.cirad.fr/581440/1/martos.pdf
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