Tomato chlorotic mottle Guyane virus: A novel tomato-infecting bipartite begomovirus from French Guiana

This is the first description of the complete genome sequence of a new bipartite begomovirus isolated from tomato (Solanum lycopersicum) in French Guiana, for which we propose the tentative name “tomato chlorotic mottle Guyane virus” (ToCMoGFV). DNA-A and -B nucleotide sequences of ToCMoGFV are only distantly related to known New World begomoviruses. They share the highest nucleotide sequence identity of 80 % with the Brazilian isolates of macroptilium yellow spot virus (MacYSV) and 73 % with soybean chlorotic spot virus (SBCSV). Phylogenetic analysis demonstrated that this novel virus belongs to a new lineage of New World bipartite begomoviruses. The discovery of this new virus confirms the high genetic diversity of begomoviruses in Latin America.

Saved in:
Bibliographic Details
Main Authors: Lett, Jean-Michel, De Bruyn, Alexandre, Hoareau, Murielle, Ouattara, Alassane, Claverie, Sohini, Dalmon, Anne, Laplace, Damien, Lefeuvre, Pierre, Hostachy, Bruno
Format: article biblioteca
Language:eng
Subjects:H20 - Maladies des plantes, virus des végétaux, espèce nouvelle, phylogénie, génome, adn, séquence nucléotidique, génie génétique, Solanum lycopersicum, taxonomie, identification, begomovirus, http://aims.fao.org/aos/agrovoc/c_5985, http://aims.fao.org/aos/agrovoc/c_15733, http://aims.fao.org/aos/agrovoc/c_13325, http://aims.fao.org/aos/agrovoc/c_3224, http://aims.fao.org/aos/agrovoc/c_2347, http://aims.fao.org/aos/agrovoc/c_27583, http://aims.fao.org/aos/agrovoc/c_15974, http://aims.fao.org/aos/agrovoc/c_4475, http://aims.fao.org/aos/agrovoc/c_7631, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_61d49fca, http://aims.fao.org/aos/agrovoc/c_3093, http://aims.fao.org/aos/agrovoc/c_4221, http://aims.fao.org/aos/agrovoc/c_3081,
Online Access:http://agritrop.cirad.fr/577378/
http://agritrop.cirad.fr/577378/7/577378_version_editee.pdf
Tags: Add Tag
No Tags, Be the first to tag this record!
Description
Summary:This is the first description of the complete genome sequence of a new bipartite begomovirus isolated from tomato (Solanum lycopersicum) in French Guiana, for which we propose the tentative name “tomato chlorotic mottle Guyane virus” (ToCMoGFV). DNA-A and -B nucleotide sequences of ToCMoGFV are only distantly related to known New World begomoviruses. They share the highest nucleotide sequence identity of 80 % with the Brazilian isolates of macroptilium yellow spot virus (MacYSV) and 73 % with soybean chlorotic spot virus (SBCSV). Phylogenetic analysis demonstrated that this novel virus belongs to a new lineage of New World bipartite begomoviruses. The discovery of this new virus confirms the high genetic diversity of begomoviruses in Latin America.