Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]

In a joint project with Cirad, eRcane laboratory facilities have been equipped with a semi-automatic Near Infra-Red Spectroscopy (NIRS) device (a Bruker Matrix-F and linked CPS conveyor) dedicated to fresh cane analysis. The breeding programme at eRcane requires analysis of 8,000 sugar cane samples per year. Conventional methods to determine cane quality at eRcane consist of shredding stalk cane samples, pressing the resulting pulp in a hydraulic press and collecting plug and juice obtained. The plug is then weighed for determination of fibre content (fibre% cane) while juice is filtered for determination of brix% and pol%. Extracted Sugar (ES% cane) is computed using the data collected. Currently, the characterisation of 8,000 sugarcane varieties requires the mobilisation of five workers simultaneously, two days and a half per week, during five months. An experiment was conducted to evaluate if NIRS could be a feasible alternative for an easier and more rapid assessment of cane varieties quality. After a period of first handling, the semi-automatic system proved to be able to handle higher work rate than the conventional method, with only 2 operators. A preliminary calibration was developed using a 200 samples dataset. 75% of the dataset was used for calibration and 25% for validation. The prediction of Brix% juice, Pol% juice and of ES% cane exhibited reliable results, since the coefficients of determination (r2) of regressions between predicted and observed values exceeded 0.9 for these three traits and Ratio Performance to Deviation (RPD=Standard deviation/standard deviation of residuals) was higher than 3. The calibration has already reached interesting accuracies statistics for fibre% cane (r²>0.7, RPD >2). Prediction of Juice purity (Pol% juice / Brix% juice) showed very poor accuracy so far (r²<0.5, RPD<1.5). Juice purity prediction will not be sought further. Standard Error of Laboratory (SEL) was calculated and it turns out that it was really low: 0.01 for Brix% juice and Pol% juice; 0.03 for ES% cane and 0.15 for fibre% cane. Hence, Standard Error of Prediction (SEP) although rather acceptable compared to bibliography, was higher than SEL: 0.62 for Brix% juice, 0.61 for Pol% juice; 0.56 for ES% cane and 1.85 for fibre% cane. Improvement of NIRS prediction equations will be sought in order to have a completely automated tool, able to accurately predict simultaneously all quality parameters required for variety comparisons. (Texte intégral)

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Main Authors: Roussel, Camille, Warembourg, Fernand R., Davrieux, Fabrice, Bernard, J., Poser, Christophe
Format: conference_item biblioteca
Language:eng
Published: ISSCT
Subjects:U30 - Méthodes de recherche, F30 - Génétique et amélioration des plantes, F60 - Physiologie et biochimie végétale,
Online Access:http://agritrop.cirad.fr/577204/
http://agritrop.cirad.fr/577204/1/ID577204.pdf
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institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic U30 - Méthodes de recherche
F30 - Génétique et amélioration des plantes
F60 - Physiologie et biochimie végétale
U30 - Méthodes de recherche
F30 - Génétique et amélioration des plantes
F60 - Physiologie et biochimie végétale
spellingShingle U30 - Méthodes de recherche
F30 - Génétique et amélioration des plantes
F60 - Physiologie et biochimie végétale
U30 - Méthodes de recherche
F30 - Génétique et amélioration des plantes
F60 - Physiologie et biochimie végétale
Roussel, Camille
Warembourg, Fernand R.
Davrieux, Fabrice
Bernard, J.
Poser, Christophe
Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
description In a joint project with Cirad, eRcane laboratory facilities have been equipped with a semi-automatic Near Infra-Red Spectroscopy (NIRS) device (a Bruker Matrix-F and linked CPS conveyor) dedicated to fresh cane analysis. The breeding programme at eRcane requires analysis of 8,000 sugar cane samples per year. Conventional methods to determine cane quality at eRcane consist of shredding stalk cane samples, pressing the resulting pulp in a hydraulic press and collecting plug and juice obtained. The plug is then weighed for determination of fibre content (fibre% cane) while juice is filtered for determination of brix% and pol%. Extracted Sugar (ES% cane) is computed using the data collected. Currently, the characterisation of 8,000 sugarcane varieties requires the mobilisation of five workers simultaneously, two days and a half per week, during five months. An experiment was conducted to evaluate if NIRS could be a feasible alternative for an easier and more rapid assessment of cane varieties quality. After a period of first handling, the semi-automatic system proved to be able to handle higher work rate than the conventional method, with only 2 operators. A preliminary calibration was developed using a 200 samples dataset. 75% of the dataset was used for calibration and 25% for validation. The prediction of Brix% juice, Pol% juice and of ES% cane exhibited reliable results, since the coefficients of determination (r2) of regressions between predicted and observed values exceeded 0.9 for these three traits and Ratio Performance to Deviation (RPD=Standard deviation/standard deviation of residuals) was higher than 3. The calibration has already reached interesting accuracies statistics for fibre% cane (r²>0.7, RPD >2). Prediction of Juice purity (Pol% juice / Brix% juice) showed very poor accuracy so far (r²<0.5, RPD<1.5). Juice purity prediction will not be sought further. Standard Error of Laboratory (SEL) was calculated and it turns out that it was really low: 0.01 for Brix% juice and Pol% juice; 0.03 for ES% cane and 0.15 for fibre% cane. Hence, Standard Error of Prediction (SEP) although rather acceptable compared to bibliography, was higher than SEL: 0.62 for Brix% juice, 0.61 for Pol% juice; 0.56 for ES% cane and 1.85 for fibre% cane. Improvement of NIRS prediction equations will be sought in order to have a completely automated tool, able to accurately predict simultaneously all quality parameters required for variety comparisons. (Texte intégral)
format conference_item
topic_facet U30 - Méthodes de recherche
F30 - Génétique et amélioration des plantes
F60 - Physiologie et biochimie végétale
author Roussel, Camille
Warembourg, Fernand R.
Davrieux, Fabrice
Bernard, J.
Poser, Christophe
author_facet Roussel, Camille
Warembourg, Fernand R.
Davrieux, Fabrice
Bernard, J.
Poser, Christophe
author_sort Roussel, Camille
title Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
title_short Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
title_full Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
title_fullStr Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
title_full_unstemmed Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]
title_sort development of nirs method for routine assessment of sugarcane quality in reunion island. [bo12]
publisher ISSCT
url http://agritrop.cirad.fr/577204/
http://agritrop.cirad.fr/577204/1/ID577204.pdf
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spelling dig-cirad-fr-5772042023-11-30T13:23:34Z http://agritrop.cirad.fr/577204/ http://agritrop.cirad.fr/577204/ Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12]. Roussel Camille, Warembourg Fernand R., Davrieux Fabrice, Bernard J., Poser Christophe. 2015. In : Pushing the frontiers of sugarcane improvement. ISSCT. Saint-Gilles : ISSCT, Résumé, 16. Germplasm and Breeding ISSCT Workshop. 11, Saint-Gilles, Réunion, 1 Juin 2015/5 Juin 2015.https://issct.org/wp-content/uploads/2020/Past%20Workshops/2013-2016/Presentations%20GBMB%20Workshop%20Reunion%20June15/RousselCWarembourgADavrieuxFBernardJPoserCDevelopmentNIRSMethodRoutineAssessmentSugarcaneQualityR.pdf <https://issct.org/wp-content/uploads/2020/Past%20Workshops/2013-2016/Presentations%20GBMB%20Workshop%20Reunion%20June15/RousselCWarembourgADavrieuxFBernardJPoserCDevelopmentNIRSMethodRoutineAssessmentSugarcaneQualityR.pdf> Development of NIRS method for routine assessment of sugarcane quality in Reunion Island. [BO12] Roussel, Camille Warembourg, Fernand R. Davrieux, Fabrice Bernard, J. Poser, Christophe eng 2015 ISSCT Pushing the frontiers of sugarcane improvement U30 - Méthodes de recherche F30 - Génétique et amélioration des plantes F60 - Physiologie et biochimie végétale In a joint project with Cirad, eRcane laboratory facilities have been equipped with a semi-automatic Near Infra-Red Spectroscopy (NIRS) device (a Bruker Matrix-F and linked CPS conveyor) dedicated to fresh cane analysis. The breeding programme at eRcane requires analysis of 8,000 sugar cane samples per year. Conventional methods to determine cane quality at eRcane consist of shredding stalk cane samples, pressing the resulting pulp in a hydraulic press and collecting plug and juice obtained. The plug is then weighed for determination of fibre content (fibre% cane) while juice is filtered for determination of brix% and pol%. Extracted Sugar (ES% cane) is computed using the data collected. Currently, the characterisation of 8,000 sugarcane varieties requires the mobilisation of five workers simultaneously, two days and a half per week, during five months. An experiment was conducted to evaluate if NIRS could be a feasible alternative for an easier and more rapid assessment of cane varieties quality. After a period of first handling, the semi-automatic system proved to be able to handle higher work rate than the conventional method, with only 2 operators. A preliminary calibration was developed using a 200 samples dataset. 75% of the dataset was used for calibration and 25% for validation. The prediction of Brix% juice, Pol% juice and of ES% cane exhibited reliable results, since the coefficients of determination (r2) of regressions between predicted and observed values exceeded 0.9 for these three traits and Ratio Performance to Deviation (RPD=Standard deviation/standard deviation of residuals) was higher than 3. The calibration has already reached interesting accuracies statistics for fibre% cane (r²>0.7, RPD >2). Prediction of Juice purity (Pol% juice / Brix% juice) showed very poor accuracy so far (r²<0.5, RPD<1.5). Juice purity prediction will not be sought further. Standard Error of Laboratory (SEL) was calculated and it turns out that it was really low: 0.01 for Brix% juice and Pol% juice; 0.03 for ES% cane and 0.15 for fibre% cane. Hence, Standard Error of Prediction (SEP) although rather acceptable compared to bibliography, was higher than SEL: 0.62 for Brix% juice, 0.61 for Pol% juice; 0.56 for ES% cane and 1.85 for fibre% cane. Improvement of NIRS prediction equations will be sought in order to have a completely automated tool, able to accurately predict simultaneously all quality parameters required for variety comparisons. (Texte intégral) conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/577204/1/ID577204.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://issct.org/wp-content/uploads/2020/Past%20Workshops/2013-2016/Presentations%20GBMB%20Workshop%20Reunion%20June15/RousselCWarembourgADavrieuxFBernardJPoserCDevelopmentNIRSMethodRoutineAssessmentSugarcaneQualityR.pdf info:eu-repo/semantics/altIdentifier/purl/https://issct.org/wp-content/uploads/2020/Past%20Workshops/2013-2016/Presentations%20GBMB%20Workshop%20Reunion%20June15/RousselCWarembourgADavrieuxFBernardJPoserCDevelopmentNIRSMethodRoutineAssessmentSugarcaneQualityR.pdf info:eu-repo/semantics/reference/purl/https://issct.org/activities/workshops/workshops-2013-2016/