Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.

The bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content.

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Main Authors: DALL'AGNOL, R. F., PLOTEGHER, F., SOUZA, R. C., MENDES, I. de C., REIS JUNIOR, F. B. dos, BÉNA, G., MOULIN, L., HUNGRIA, M.
Other Authors: REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
Format: Separatas biblioteca
Language:English
eng
Published: 2016-11-22
Subjects:Fixação biológica de nitrogênio., Cerrado.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811
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spelling dig-alice-doc-10568112017-08-16T03:49:05Z Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'. DALL'AGNOL, R. F. PLOTEGHER, F. SOUZA, R. C. MENDES, I. de C. REIS JUNIOR, F. B. dos BÉNA, G. MOULIN, L. HUNGRIA, M. REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO. Fixação biológica de nitrogênio. Cerrado. The bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content. 2016-11-22T11:11:11Z 2016-11-22T11:11:11Z 2016-11-22 2016 2016-11-23T11:11:11Z Separatas FEMS Microbiology Ecology, 2016, v. 92, n. 8, 14 p., nov. 2016. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811 10.1093/femsec/fiw108 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Fixação biológica de nitrogênio.
Cerrado.
Fixação biológica de nitrogênio.
Cerrado.
spellingShingle Fixação biológica de nitrogênio.
Cerrado.
Fixação biológica de nitrogênio.
Cerrado.
DALL'AGNOL, R. F.
PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
description The bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content.
author2 REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
author_facet REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
DALL'AGNOL, R. F.
PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
format Separatas
topic_facet Fixação biológica de nitrogênio.
Cerrado.
author DALL'AGNOL, R. F.
PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
author_sort DALL'AGNOL, R. F.
title Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_short Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_full Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_fullStr Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_full_unstemmed Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_sort paraburkholderia nodosa is the main n2-fixing species trapped by promiscuous common bean (phaseolus vulgaris l.) in the brazilian 'cerradão'.
publishDate 2016-11-22
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811
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