Characterization of NgAgo cleavage sites

NgAgo and mutants were incubated with plasmid DNA and 5'P guide sequences targeting the plasmid. Nicked/cleaved products were amplified via primer extension, which terminates at the nick site, before being used to generate dsDNA that was ligated into pGEM-T-Easy. The library of ligated products were then sequenced. Raw reads from products generated via primers hybridizing on the 5' and 3' end of the target are deposited here.

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Bibliographic Details
Main Author: Purdue University (18794680)
Format: Dataset biblioteca
Published: 2021
Subjects:Genetics, raw sequence reads,
Online Access:https://figshare.com/articles/dataset/Characterization_of_NgAgo_cleavage_sites/25088783
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Description
Summary:NgAgo and mutants were incubated with plasmid DNA and 5'P guide sequences targeting the plasmid. Nicked/cleaved products were amplified via primer extension, which terminates at the nick site, before being used to generate dsDNA that was ligated into pGEM-T-Easy. The library of ligated products were then sequenced. Raw reads from products generated via primers hybridizing on the 5' and 3' end of the target are deposited here.