The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease

Abstract Genome-wide associations studies (GWAS) are detecting new variants associated with late-onset of Alzheimer’s disease (LOAD), a multifactorial neurodegenerative disorder. The variants rs744373 BIN1, rs11136000 CLU and rs3764650 ABCA7 uncovered by GWAS led to different AD pathways, such as metabolism, trafficking and endocytosis of lipids and inflammation. However, most of the association studies did not replicate these variants with significance. This could be due to a small power effect evident when these variants are tested independently with LOAD. Therefore, we aimed to investigate whether the combination of different variants would additively modify the risk of association with LOAD that is observed in GWAS. We performed an association study testing pairwise variants in metabolism, trafficking and endocytosis of lipid (rs429358 and rs7412 APOE, rs744373 BIN1, rs3764650 ABCA7 and rs11136000 CLU) pathways with LOAD in samples from southeastern Brazil. Our data suggest a risk effect for LOAD between APOE with CLU and APOE with BIN1 genes.

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Main Authors: Santos,Lígia Ramos dos, Almeida,Jucimara Ferreira Figueiredo, Pimassoni,Lúcia Helena Sagrillo, Morelato,Renato Lírio, Paula,Flavia de
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Genética 2020
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000100113
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spelling oai:scielo:S1415-475720200001001132020-03-13The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s diseaseSantos,Lígia Ramos dosAlmeida,Jucimara Ferreira FigueiredoPimassoni,Lúcia Helena SagrilloMorelato,Renato LírioPaula,Flavia de GWAS variants APOE CLU BIN1 ABCA7 Abstract Genome-wide associations studies (GWAS) are detecting new variants associated with late-onset of Alzheimer’s disease (LOAD), a multifactorial neurodegenerative disorder. The variants rs744373 BIN1, rs11136000 CLU and rs3764650 ABCA7 uncovered by GWAS led to different AD pathways, such as metabolism, trafficking and endocytosis of lipids and inflammation. However, most of the association studies did not replicate these variants with significance. This could be due to a small power effect evident when these variants are tested independently with LOAD. Therefore, we aimed to investigate whether the combination of different variants would additively modify the risk of association with LOAD that is observed in GWAS. We performed an association study testing pairwise variants in metabolism, trafficking and endocytosis of lipid (rs429358 and rs7412 APOE, rs744373 BIN1, rs3764650 ABCA7 and rs11136000 CLU) pathways with LOAD in samples from southeastern Brazil. Our data suggest a risk effect for LOAD between APOE with CLU and APOE with BIN1 genes.info:eu-repo/semantics/openAccessSociedade Brasileira de GenéticaGenetics and Molecular Biology v.43 n.1 20202020-01-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000100113en10.1590/1678-4685-gmb-2018-0320
institution SCIELO
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country Brasil
countrycode BR
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access En linea
databasecode rev-scielo-br
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region America del Sur
libraryname SciELO
language English
format Digital
author Santos,Lígia Ramos dos
Almeida,Jucimara Ferreira Figueiredo
Pimassoni,Lúcia Helena Sagrillo
Morelato,Renato Lírio
Paula,Flavia de
spellingShingle Santos,Lígia Ramos dos
Almeida,Jucimara Ferreira Figueiredo
Pimassoni,Lúcia Helena Sagrillo
Morelato,Renato Lírio
Paula,Flavia de
The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
author_facet Santos,Lígia Ramos dos
Almeida,Jucimara Ferreira Figueiredo
Pimassoni,Lúcia Helena Sagrillo
Morelato,Renato Lírio
Paula,Flavia de
author_sort Santos,Lígia Ramos dos
title The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
title_short The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
title_full The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
title_fullStr The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
title_full_unstemmed The combined risk effect among BIN1, CLU, and APOE genes in Alzheimer’s disease
title_sort combined risk effect among bin1, clu, and apoe genes in alzheimer’s disease
description Abstract Genome-wide associations studies (GWAS) are detecting new variants associated with late-onset of Alzheimer’s disease (LOAD), a multifactorial neurodegenerative disorder. The variants rs744373 BIN1, rs11136000 CLU and rs3764650 ABCA7 uncovered by GWAS led to different AD pathways, such as metabolism, trafficking and endocytosis of lipids and inflammation. However, most of the association studies did not replicate these variants with significance. This could be due to a small power effect evident when these variants are tested independently with LOAD. Therefore, we aimed to investigate whether the combination of different variants would additively modify the risk of association with LOAD that is observed in GWAS. We performed an association study testing pairwise variants in metabolism, trafficking and endocytosis of lipid (rs429358 and rs7412 APOE, rs744373 BIN1, rs3764650 ABCA7 and rs11136000 CLU) pathways with LOAD in samples from southeastern Brazil. Our data suggest a risk effect for LOAD between APOE with CLU and APOE with BIN1 genes.
publisher Sociedade Brasileira de Genética
publishDate 2020
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000100113
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