Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera
[Background] Rhinorhipidae Lawrence, 1988 is an enigmatic beetle family represented by a single species, Rhinorhipus tamborinensis Lawrence, 1988, from Australia, with poorly established affinities near the superfamily Elateroidea (click beetles, soldier beetles and fireflies) or the more inclusive series (infraorder) Elateriformia. Its evolutionary position may inform the basal relationships of the suborder Polyphaga, the largest clade of Coleoptera. [Results] We analyzed four densely sampled DNA datasets of major coleopteran lineages for mitogenomes, rRNA genes and single copy nuclear genes. Additionally, genome sequencing was used for incorporation of R. tamborinensis into a set of 4220 orthologs for 24 terminals representing 12 polyphagan superfamilies. Topologies differed to various degrees, but all consistently refute the proposed placement of Rhinorhipidae in Elateroidea and instead indicate either sister relationships with other Elateriformia, frequently together with Nosodendridae, another divergent small family hitherto placed in Derodontoidea, or in an isolated position among the deepest lineages of Polyphaga. The phylogenomic analyses recovered Rhinorhipus in a sister position to all other Elateriformia composed of five superfamilies. Therefore, we erect the new superfamily Rhinorhipoidea Lawrence, 1988, stat. Nov., with the type-family Rhinorhipidae. The origins of the Rhinorhipidae were dated to the Upper Triassic/Lower Jurassic at the very early phase of polyphagan diversification. [Conclusions] Thus, Rhinorhipidae adds another example to several recently recognized ancient relict lineages which are interspersed within contemporaneous hugely species-rich lineages of Coleoptera.
Main Authors: | , , , , , , , , , |
---|---|
Other Authors: | |
Format: | artículo biblioteca |
Published: |
BioMed Central
2018-05-02
|
Subjects: | New superfamily, Elateriformia, Phylotranscriptomics, Molecular phylogeny, Triassic, Rhinorhipidae, |
Online Access: | http://hdl.handle.net/10261/179738 http://dx.doi.org/10.13039/501100000275 |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
id |
dig-ipna-es-10261-179738 |
---|---|
record_format |
koha |
spelling |
dig-ipna-es-10261-1797382021-12-27T16:34:33Z Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera Kusy, Dominik Motyka, Michal Andújar, Carmelo Bocek, Matej Masek, Michal Sklenarova, Katerina Kokas, Filip Bocakova, Milada Vogler, Alfried P. Bocak, Ladislav Leverhulme Trust New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae [Background] Rhinorhipidae Lawrence, 1988 is an enigmatic beetle family represented by a single species, Rhinorhipus tamborinensis Lawrence, 1988, from Australia, with poorly established affinities near the superfamily Elateroidea (click beetles, soldier beetles and fireflies) or the more inclusive series (infraorder) Elateriformia. Its evolutionary position may inform the basal relationships of the suborder Polyphaga, the largest clade of Coleoptera. [Results] We analyzed four densely sampled DNA datasets of major coleopteran lineages for mitogenomes, rRNA genes and single copy nuclear genes. Additionally, genome sequencing was used for incorporation of R. tamborinensis into a set of 4220 orthologs for 24 terminals representing 12 polyphagan superfamilies. Topologies differed to various degrees, but all consistently refute the proposed placement of Rhinorhipidae in Elateroidea and instead indicate either sister relationships with other Elateriformia, frequently together with Nosodendridae, another divergent small family hitherto placed in Derodontoidea, or in an isolated position among the deepest lineages of Polyphaga. The phylogenomic analyses recovered Rhinorhipus in a sister position to all other Elateriformia composed of five superfamilies. Therefore, we erect the new superfamily Rhinorhipoidea Lawrence, 1988, stat. Nov., with the type-family Rhinorhipidae. The origins of the Rhinorhipidae were dated to the Upper Triassic/Lower Jurassic at the very early phase of polyphagan diversification. [Conclusions] Thus, Rhinorhipidae adds another example to several recently recognized ancient relict lineages which are interspersed within contemporaneous hugely species-rich lineages of Coleoptera. The study was funded by the IGA and GACR projects (PrF2018, 18-14942S to L.B., D.K., M.Mo. and Ma.B.), Leverhulme Trust (F/00696/P to A.P.V. and L.B.) and the NHM Biodiversity Initiative. Peer Reviewed 2019-04-09T15:48:14Z 2019-04-09T15:48:14Z 2018-05-02 2019-04-09T15:48:15Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1186/s12983-018-0262-0 e-issn: 1742-9994 Frontiers in Zoology 15:21 (2018) http://hdl.handle.net/10261/179738 10.1186/s12983-018-0262-0 http://dx.doi.org/10.13039/501100000275 29743928 Publisher's version https://doi.org/10.1186/s12983-018-0262-0 Sí open BioMed Central |
institution |
IPNA ES |
collection |
DSpace |
country |
España |
countrycode |
ES |
component |
Bibliográfico |
access |
En linea |
databasecode |
dig-ipna-es |
tag |
biblioteca |
region |
Europa del Sur |
libraryname |
Biblioteca del IPNA España |
topic |
New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae |
spellingShingle |
New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae Kusy, Dominik Motyka, Michal Andújar, Carmelo Bocek, Matej Masek, Michal Sklenarova, Katerina Kokas, Filip Bocakova, Milada Vogler, Alfried P. Bocak, Ladislav Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
description |
[Background] Rhinorhipidae Lawrence, 1988 is an enigmatic beetle family represented by a single species, Rhinorhipus tamborinensis Lawrence, 1988, from Australia, with poorly established affinities near the superfamily Elateroidea (click beetles, soldier beetles and fireflies) or the more inclusive series (infraorder) Elateriformia. Its evolutionary position may inform the basal relationships of the suborder Polyphaga, the largest clade of Coleoptera. [Results] We analyzed four densely sampled DNA datasets of major coleopteran lineages for mitogenomes, rRNA genes and single copy nuclear genes. Additionally, genome sequencing was used for incorporation of R. tamborinensis into a set of 4220 orthologs for 24 terminals representing 12 polyphagan superfamilies. Topologies differed to various degrees, but all consistently refute the proposed placement of Rhinorhipidae in Elateroidea and instead indicate either sister relationships with other Elateriformia, frequently together with Nosodendridae, another divergent small family hitherto placed in Derodontoidea, or in an isolated position among the deepest lineages of Polyphaga. The phylogenomic analyses recovered Rhinorhipus in a sister position to all other Elateriformia composed of five superfamilies. Therefore, we erect the new superfamily Rhinorhipoidea Lawrence, 1988, stat. Nov., with the type-family Rhinorhipidae. The origins of the Rhinorhipidae were dated to the Upper Triassic/Lower Jurassic at the very early phase of polyphagan diversification. [Conclusions] Thus, Rhinorhipidae adds another example to several recently recognized ancient relict lineages which are interspersed within contemporaneous hugely species-rich lineages of Coleoptera. |
author2 |
Leverhulme Trust |
author_facet |
Leverhulme Trust Kusy, Dominik Motyka, Michal Andújar, Carmelo Bocek, Matej Masek, Michal Sklenarova, Katerina Kokas, Filip Bocakova, Milada Vogler, Alfried P. Bocak, Ladislav |
format |
artículo |
topic_facet |
New superfamily Elateriformia Phylotranscriptomics Molecular phylogeny Triassic Rhinorhipidae |
author |
Kusy, Dominik Motyka, Michal Andújar, Carmelo Bocek, Matej Masek, Michal Sklenarova, Katerina Kokas, Filip Bocakova, Milada Vogler, Alfried P. Bocak, Ladislav |
author_sort |
Kusy, Dominik |
title |
Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
title_short |
Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
title_full |
Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
title_fullStr |
Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
title_full_unstemmed |
Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera |
title_sort |
genome sequencing of rhinorhipus lawrence exposes an early branch of the coleoptera |
publisher |
BioMed Central |
publishDate |
2018-05-02 |
url |
http://hdl.handle.net/10261/179738 http://dx.doi.org/10.13039/501100000275 |
work_keys_str_mv |
AT kusydominik genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT motykamichal genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT andujarcarmelo genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT bocekmatej genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT masekmichal genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT sklenarovakaterina genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT kokasfilip genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT bocakovamilada genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT vogleralfriedp genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera AT bocakladislav genomesequencingofrhinorhipuslawrenceexposesanearlybranchofthecoleoptera |
_version_ |
1777669753964331008 |