Soil nematode abundance and functional group composition at a global scale

Soil organisms are a crucial part of the terrestrial biosphere. Despite their importance for ecosystem functioning, few quantitative, spatially explicit models of the active belowground community currently exist. In particular, nematodes are the most abundant animals on Earth, filling all trophic levels in the soil food web. Here we use 6,759 georeferenced samples to generate a mechanistic understanding of the patterns of the global abundance of nematodes in the soil and the composition of their functional groups. The resulting maps show that 4.4 ± 0.64 × 1020 nematodes (with a total biomass of approximately 0.3 gigatonnes) inhabit surface soils across the world, with higher abundances in sub-Arctic regions (38% of total) than in temperate (24%) or tropical (21%) regions. Regional variations in these global trends also provide insights into local patterns of soil fertility and functioning. These high-resolution models provide the first steps towards representing soil ecological processes in global biogeochemical models and will enable the prediction of elemental cycling under current and future climate scenarios.

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Main Authors: Hoogen, Johan van den, Geisen, Stefan, Routh, Devin, Ferris, Howard, Traunspurger, Walter, Wardle, David A., Goede, Ron G. M. de, Adams, Byron J., Ahmad, Wasim, Andriuzzi, Walter S., Bardgett, Richard D., Bonkowski, Michael, Campos-Herrera, R., Cares, Juvenil E., Caruso, Tancredi, Brito Caixeta, Larissa de, Chen, Xiaoyun, Costa, Sofia R., Creamer, Rachel, Cunha Castro, José Mauro da, Dam, Marie, Djigal, Djibril, Escuer, M., Griffiths, Bryan S., Gutiérrez, Carmen, Hohberg, Karin, Kalinkina, Daria, Kardol, Paul, Kergunteuil, Alan, Korthals, Gerard, Krashevska, Valentyna, Kudrin, Alexey A., Li, Qi, Liang, Wenju, Magilton, Matthew, Marais, Mariette, Rodríguez Martín, José Antonio, Matveeva, Elizaveta, Mayad, El Hassan, Mulder, Christian, Mullin, Peter, Neilson, Roy, Nguyen, T. A. Duong, Nielsen, Uffe N., Okada, Hiroaki, Palomares Rius, Juan E., Pan, Kaiwen, Peneva, Vlada, Pellissier, Loïc, Pereira da Silva, Julio Carlos, Pitteloud, Camille, Powers, Thomas O., Powers, Kirsten, Quist, Casper W., Rasmann, Sergio, Sánchez Moreno, Sara, Scheu, Stefan, Setälä, Heikki, Sushchuk, Anna, Tiunov, Alexei V., Trap, Jean, Putten, Wim van der, Vestergård, Mette, Villenave, Cecile, Waeyenberge, Lieven, Wall, Diana H., Wilschut, Rutger, Wright, Daniel G., Yang, Jiue-in, Crowther, Thomas Ward
Other Authors: Netherlands Organization for Scientific Research
Format: artículo biblioteca
Language:English
Published: 2019-08-08
Subjects:Biogeography, Ecological modelling, Machine learning,
Online Access:http://hdl.handle.net/10261/193342
http://dx.doi.org/10.13039/501100000270
http://dx.doi.org/10.13039/501100002261
http://dx.doi.org/10.13039/501100001807
http://dx.doi.org/10.13039/501100000923
http://dx.doi.org/10.13039/501100002367
http://dx.doi.org/10.13039/501100003593
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100004901
http://dx.doi.org/10.13039/501100001871
http://dx.doi.org/10.13039/501100001655
http://dx.doi.org/10.13039/501100001659
http://dx.doi.org/10.13039/100011150
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100001809
http://dx.doi.org/10.13039/100000001
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id dig-icvv-es-10261-193342
record_format koha
institution ICVV ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-icvv-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del ICVV España
language English
topic Biogeography
Ecological modelling
Machine learning
Biogeography
Ecological modelling
Machine learning
spellingShingle Biogeography
Ecological modelling
Machine learning
Biogeography
Ecological modelling
Machine learning
Hoogen, Johan van den
Geisen, Stefan
Routh, Devin
Ferris, Howard
Traunspurger, Walter
Wardle, David A.
Goede, Ron G. M. de
Adams, Byron J.
Ahmad, Wasim
Andriuzzi, Walter S.
Bardgett, Richard D.
Bonkowski, Michael
Campos-Herrera, R.
Cares, Juvenil E.
Caruso, Tancredi
Brito Caixeta, Larissa de
Chen, Xiaoyun
Costa, Sofia R.
Creamer, Rachel
Cunha Castro, José Mauro da
Dam, Marie
Djigal, Djibril
Escuer, M.
Griffiths, Bryan S.
Gutiérrez, Carmen
Hohberg, Karin
Kalinkina, Daria
Kardol, Paul
Kergunteuil, Alan
Korthals, Gerard
Krashevska, Valentyna
Kudrin, Alexey A.
Li, Qi
Liang, Wenju
Magilton, Matthew
Marais, Mariette
Rodríguez Martín, José Antonio
Matveeva, Elizaveta
Mayad, El Hassan
Mulder, Christian
Mullin, Peter
Neilson, Roy
Nguyen, T. A. Duong
Nielsen, Uffe N.
Okada, Hiroaki
Palomares Rius, Juan E.
Pan, Kaiwen
Peneva, Vlada
Pellissier, Loïc
Pereira da Silva, Julio Carlos
Pitteloud, Camille
Powers, Thomas O.
Powers, Kirsten
Quist, Casper W.
Rasmann, Sergio
Sánchez Moreno, Sara
Scheu, Stefan
Setälä, Heikki
Sushchuk, Anna
Tiunov, Alexei V.
Trap, Jean
Putten, Wim van der
Vestergård, Mette
Villenave, Cecile
Waeyenberge, Lieven
Wall, Diana H.
Wilschut, Rutger
Wright, Daniel G.
Yang, Jiue-in
Crowther, Thomas Ward
Soil nematode abundance and functional group composition at a global scale
description Soil organisms are a crucial part of the terrestrial biosphere. Despite their importance for ecosystem functioning, few quantitative, spatially explicit models of the active belowground community currently exist. In particular, nematodes are the most abundant animals on Earth, filling all trophic levels in the soil food web. Here we use 6,759 georeferenced samples to generate a mechanistic understanding of the patterns of the global abundance of nematodes in the soil and the composition of their functional groups. The resulting maps show that 4.4 ± 0.64 × 1020 nematodes (with a total biomass of approximately 0.3 gigatonnes) inhabit surface soils across the world, with higher abundances in sub-Arctic regions (38% of total) than in temperate (24%) or tropical (21%) regions. Regional variations in these global trends also provide insights into local patterns of soil fertility and functioning. These high-resolution models provide the first steps towards representing soil ecological processes in global biogeochemical models and will enable the prediction of elemental cycling under current and future climate scenarios.
author2 Netherlands Organization for Scientific Research
author_facet Netherlands Organization for Scientific Research
Hoogen, Johan van den
Geisen, Stefan
Routh, Devin
Ferris, Howard
Traunspurger, Walter
Wardle, David A.
Goede, Ron G. M. de
Adams, Byron J.
Ahmad, Wasim
Andriuzzi, Walter S.
Bardgett, Richard D.
Bonkowski, Michael
Campos-Herrera, R.
Cares, Juvenil E.
Caruso, Tancredi
Brito Caixeta, Larissa de
Chen, Xiaoyun
Costa, Sofia R.
Creamer, Rachel
Cunha Castro, José Mauro da
Dam, Marie
Djigal, Djibril
Escuer, M.
Griffiths, Bryan S.
Gutiérrez, Carmen
Hohberg, Karin
Kalinkina, Daria
Kardol, Paul
Kergunteuil, Alan
Korthals, Gerard
Krashevska, Valentyna
Kudrin, Alexey A.
Li, Qi
Liang, Wenju
Magilton, Matthew
Marais, Mariette
Rodríguez Martín, José Antonio
Matveeva, Elizaveta
Mayad, El Hassan
Mulder, Christian
Mullin, Peter
Neilson, Roy
Nguyen, T. A. Duong
Nielsen, Uffe N.
Okada, Hiroaki
Palomares Rius, Juan E.
Pan, Kaiwen
Peneva, Vlada
Pellissier, Loïc
Pereira da Silva, Julio Carlos
Pitteloud, Camille
Powers, Thomas O.
Powers, Kirsten
Quist, Casper W.
Rasmann, Sergio
Sánchez Moreno, Sara
Scheu, Stefan
Setälä, Heikki
Sushchuk, Anna
Tiunov, Alexei V.
Trap, Jean
Putten, Wim van der
Vestergård, Mette
Villenave, Cecile
Waeyenberge, Lieven
Wall, Diana H.
Wilschut, Rutger
Wright, Daniel G.
Yang, Jiue-in
Crowther, Thomas Ward
format artículo
topic_facet Biogeography
Ecological modelling
Machine learning
author Hoogen, Johan van den
Geisen, Stefan
Routh, Devin
Ferris, Howard
Traunspurger, Walter
Wardle, David A.
Goede, Ron G. M. de
Adams, Byron J.
Ahmad, Wasim
Andriuzzi, Walter S.
Bardgett, Richard D.
Bonkowski, Michael
Campos-Herrera, R.
Cares, Juvenil E.
Caruso, Tancredi
Brito Caixeta, Larissa de
Chen, Xiaoyun
Costa, Sofia R.
Creamer, Rachel
Cunha Castro, José Mauro da
Dam, Marie
Djigal, Djibril
Escuer, M.
Griffiths, Bryan S.
Gutiérrez, Carmen
Hohberg, Karin
Kalinkina, Daria
Kardol, Paul
Kergunteuil, Alan
Korthals, Gerard
Krashevska, Valentyna
Kudrin, Alexey A.
Li, Qi
Liang, Wenju
Magilton, Matthew
Marais, Mariette
Rodríguez Martín, José Antonio
Matveeva, Elizaveta
Mayad, El Hassan
Mulder, Christian
Mullin, Peter
Neilson, Roy
Nguyen, T. A. Duong
Nielsen, Uffe N.
Okada, Hiroaki
Palomares Rius, Juan E.
Pan, Kaiwen
Peneva, Vlada
Pellissier, Loïc
Pereira da Silva, Julio Carlos
Pitteloud, Camille
Powers, Thomas O.
Powers, Kirsten
Quist, Casper W.
Rasmann, Sergio
Sánchez Moreno, Sara
Scheu, Stefan
Setälä, Heikki
Sushchuk, Anna
Tiunov, Alexei V.
Trap, Jean
Putten, Wim van der
Vestergård, Mette
Villenave, Cecile
Waeyenberge, Lieven
Wall, Diana H.
Wilschut, Rutger
Wright, Daniel G.
Yang, Jiue-in
Crowther, Thomas Ward
author_sort Hoogen, Johan van den
title Soil nematode abundance and functional group composition at a global scale
title_short Soil nematode abundance and functional group composition at a global scale
title_full Soil nematode abundance and functional group composition at a global scale
title_fullStr Soil nematode abundance and functional group composition at a global scale
title_full_unstemmed Soil nematode abundance and functional group composition at a global scale
title_sort soil nematode abundance and functional group composition at a global scale
publishDate 2019-08-08
url http://hdl.handle.net/10261/193342
http://dx.doi.org/10.13039/501100000270
http://dx.doi.org/10.13039/501100002261
http://dx.doi.org/10.13039/501100001807
http://dx.doi.org/10.13039/501100000923
http://dx.doi.org/10.13039/501100002367
http://dx.doi.org/10.13039/501100003593
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100004901
http://dx.doi.org/10.13039/501100001871
http://dx.doi.org/10.13039/501100001655
http://dx.doi.org/10.13039/501100001659
http://dx.doi.org/10.13039/100011150
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100001809
http://dx.doi.org/10.13039/100000001
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spelling dig-icvv-es-10261-1933422022-12-01T08:34:15Z Soil nematode abundance and functional group composition at a global scale Hoogen, Johan van den Geisen, Stefan Routh, Devin Ferris, Howard Traunspurger, Walter Wardle, David A. Goede, Ron G. M. de Adams, Byron J. Ahmad, Wasim Andriuzzi, Walter S. Bardgett, Richard D. Bonkowski, Michael Campos-Herrera, R. Cares, Juvenil E. Caruso, Tancredi Brito Caixeta, Larissa de Chen, Xiaoyun Costa, Sofia R. Creamer, Rachel Cunha Castro, José Mauro da Dam, Marie Djigal, Djibril Escuer, M. Griffiths, Bryan S. Gutiérrez, Carmen Hohberg, Karin Kalinkina, Daria Kardol, Paul Kergunteuil, Alan Korthals, Gerard Krashevska, Valentyna Kudrin, Alexey A. Li, Qi Liang, Wenju Magilton, Matthew Marais, Mariette Rodríguez Martín, José Antonio Matveeva, Elizaveta Mayad, El Hassan Mulder, Christian Mullin, Peter Neilson, Roy Nguyen, T. A. Duong Nielsen, Uffe N. Okada, Hiroaki Palomares Rius, Juan E. Pan, Kaiwen Peneva, Vlada Pellissier, Loïc Pereira da Silva, Julio Carlos Pitteloud, Camille Powers, Thomas O. Powers, Kirsten Quist, Casper W. Rasmann, Sergio Sánchez Moreno, Sara Scheu, Stefan Setälä, Heikki Sushchuk, Anna Tiunov, Alexei V. Trap, Jean Putten, Wim van der Vestergård, Mette Villenave, Cecile Waeyenberge, Lieven Wall, Diana H. Wilschut, Rutger Wright, Daniel G. Yang, Jiue-in Crowther, Thomas Ward Netherlands Organization for Scientific Research National Science Foundation (US) Global Environment Facility Natural Environment Research Council (UK) Fundação de Amparo à Pesquisa do Estado de São Paulo Minas Gerais Fundação de Amparo à Pesquisa do Estado de São Paulo Fundação para a Ciência e a Tecnologia (Portugal) European Commission Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil) German Research Foundation Chinese Academy of Sciences National Natural Science Foundation of China Ministerio de Economía y Competitividad (España) German Academic Exchange Service National Foundation for Science and Technology Development (Vietnam) Australian Research Council Scottish Government's Rural and Environment Science and Analytical Services Russian Foundation for Basic Research Campos-Herrera, R. [0000-0003-0852-5269] Biogeography Ecological modelling Machine learning Soil organisms are a crucial part of the terrestrial biosphere. Despite their importance for ecosystem functioning, few quantitative, spatially explicit models of the active belowground community currently exist. In particular, nematodes are the most abundant animals on Earth, filling all trophic levels in the soil food web. Here we use 6,759 georeferenced samples to generate a mechanistic understanding of the patterns of the global abundance of nematodes in the soil and the composition of their functional groups. The resulting maps show that 4.4 ± 0.64 × 1020 nematodes (with a total biomass of approximately 0.3 gigatonnes) inhabit surface soils across the world, with higher abundances in sub-Arctic regions (38% of total) than in temperate (24%) or tropical (21%) regions. Regional variations in these global trends also provide insights into local patterns of soil fertility and functioning. These high-resolution models provide the first steps towards representing soil ecological processes in global biogeochemical models and will enable the prediction of elemental cycling under current and future climate scenarios. This research was supported by a grant from DOB Ecology to T.W.C., a grant from the Netherlands Organization for Scientific Research (grant 016.Veni.181.078) to S.G., grants from NSF (OPP 1115245, 1341736, 0840979) to B.J.A., by a Ramon y Cajal fellow award (RYC-2016-19939) to R.C.H., a grant from UNEP & Global Environment Facility to J.E.C., a grant from NERC (NE/M017036/1) to T.C., a grant from FAPEMIG/FAPESP/VALE S.A.(CRA-RDP-00136-10) to L.B.C., through the strategic programme UID/BIA/04050/2013 (POCI-01-0145-FEDER-007569) awarded to S.R.C., a grant from CNPq PROTAX (562346/2010-4) to J.M.d.C.C., a grant from DFG (CRC990) to V.K. and S.S., a grant from the MSHE of Russia (AAAA-A17-117112850234-5) to A.A.K., grants from the Chinese Academy of Sciences (XDB15010402) and the National Natural Science Foundation of China (41877047) to Q.L., grants from the National Natural Science Foundation of China (31330011, 31170484) to W.L., grants from NERC (NE/M017036/1) to M.M., grants from the Spanish Ministry of Innovation (CGL2009-14686-C02-01/ 02, CGL2013-43675-P) to J.A.R.M., grants from NSF (DEB-0450537, DEB-1145440) to P.M., T.O.P. and K. Powers, grants from the German Academic Exchange Service (PKZ 91540366) and NAFOSTED (106.05 – 2017.330) to T.A.D.N., by an ARC Discovery project (DP150104199) to U.N.N., by the National Key Research and Development Program of China (2016YFC0502101) and the National Natural Science Foundation of China (31370632) to K. Pan, a grant from the Natural Environment Research Council (NERC) to D.G.W., a grant from BAPHIQ (106AS-9.5.1-BQ-B3) J.-i.Y. The James Hutton Institute receives financial support from the Scottish Government Rural and Environment Science and Analytical Services (RESAS) division. Investigations in northwest Russia were carried out under state order for IB KarRC RAS and are partially supported by the Russian Foundation for Basic Research (18-34-00849). We thank E. Clark and A. Orgiazzi for review of the manuscript; and R. Bouharroud, Z. Ferji, L. Jackson and E. Mzough for providing data. Peer reviewed 2019-10-24T11:00:21Z 2019-10-24T11:00:21Z 2019-08-08 artículo http://purl.org/coar/resource_type/c_6501 Nature 572: 194-198 (2019) 0028-0836 http://hdl.handle.net/10261/193342 10.1038/s41586-019-1418-6 1476-4687 http://dx.doi.org/10.13039/501100000270 http://dx.doi.org/10.13039/501100002261 http://dx.doi.org/10.13039/501100001807 http://dx.doi.org/10.13039/501100000923 http://dx.doi.org/10.13039/501100002367 http://dx.doi.org/10.13039/501100003593 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100004901 http://dx.doi.org/10.13039/501100001871 http://dx.doi.org/10.13039/501100001655 http://dx.doi.org/10.13039/501100001659 http://dx.doi.org/10.13039/100011150 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/501100001809 http://dx.doi.org/10.13039/100000001 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/RYC-2016-19939 Postprint http://dx.doi.org/10.1038/s41586-019-1418-6 Sí open