Biased-corrected richness estimates for the Amazonian tree flora
Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come.
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dig-cirad-fr-605382 |
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koha |
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CIRAD FR |
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DSpace |
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Francia |
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FR |
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Bibliográfico |
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En linea |
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dig-cirad-fr |
tag |
biblioteca |
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Europa del Oeste |
libraryname |
Biblioteca del CIRAD Francia |
language |
eng |
topic |
flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 |
spellingShingle |
flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 Ter Steege, Hans Prado, Paulo I. de Lima, Renato A. F. Pos, Edwin de Souza Coelho, Luiz de Andrade Lima Filho, Diogenes Salomão, Rafael P. Amaral, Iêda Leão de Almeida Matos, Francisca Dionízia Castilho, Carolina V. Phillips, Oliver L. Guevara, Juan Ernesto de Jesus Veiga Carim, Marcelo Cárdenas López, Dairon Magnusson, William E Wittmann, Florian Pires Martins, Maria Sabatier, Daniel Irume, Victória Irume da Silva Guimarães, José Renan Molino, Jean-François Banki, Olaf Fernandez Piedade, Maria Teresa Pitman, Nigel C. A. Ferreira Ramos, José Monteagudo Mendoza, Abel Venticinque, Eduardo Martins Garcia Luize, Bruno Nuñez Vargas, Percy Freire Silva, Thiago Sanna Moraes de Leão Novo, Evlyn Márcia Costa Reis, Neidiane Farias Terborgh, John Manzatto, Angelo Gilberto Casula, Katia Regina Honorio Coronado, Eurídice N. Montero, Juan Carlos Duque, Alvaro Costa, Flávia R.C Castaño Arboleda, Nicolás Schöngart, Jochen Zartman, Charles Eugene Killeen, Timothy J. Marimon, Beatriz Schwantes Marimon-Junior, Ben Hur Vasquez, Rodolfo Mostacedo, Bonifacio Demarchi, Layon O. Feldpausch, Ted R. Engel, Julien Petronelli, Pascal et al., Biased-corrected richness estimates for the Amazonian tree flora |
description |
Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come. |
format |
article |
topic_facet |
flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 |
author |
Ter Steege, Hans Prado, Paulo I. de Lima, Renato A. F. Pos, Edwin de Souza Coelho, Luiz de Andrade Lima Filho, Diogenes Salomão, Rafael P. Amaral, Iêda Leão de Almeida Matos, Francisca Dionízia Castilho, Carolina V. Phillips, Oliver L. Guevara, Juan Ernesto de Jesus Veiga Carim, Marcelo Cárdenas López, Dairon Magnusson, William E Wittmann, Florian Pires Martins, Maria Sabatier, Daniel Irume, Victória Irume da Silva Guimarães, José Renan Molino, Jean-François Banki, Olaf Fernandez Piedade, Maria Teresa Pitman, Nigel C. A. Ferreira Ramos, José Monteagudo Mendoza, Abel Venticinque, Eduardo Martins Garcia Luize, Bruno Nuñez Vargas, Percy Freire Silva, Thiago Sanna Moraes de Leão Novo, Evlyn Márcia Costa Reis, Neidiane Farias Terborgh, John Manzatto, Angelo Gilberto Casula, Katia Regina Honorio Coronado, Eurídice N. Montero, Juan Carlos Duque, Alvaro Costa, Flávia R.C Castaño Arboleda, Nicolás Schöngart, Jochen Zartman, Charles Eugene Killeen, Timothy J. Marimon, Beatriz Schwantes Marimon-Junior, Ben Hur Vasquez, Rodolfo Mostacedo, Bonifacio Demarchi, Layon O. Feldpausch, Ted R. Engel, Julien Petronelli, Pascal et al., |
author_facet |
Ter Steege, Hans Prado, Paulo I. de Lima, Renato A. F. Pos, Edwin de Souza Coelho, Luiz de Andrade Lima Filho, Diogenes Salomão, Rafael P. Amaral, Iêda Leão de Almeida Matos, Francisca Dionízia Castilho, Carolina V. Phillips, Oliver L. Guevara, Juan Ernesto de Jesus Veiga Carim, Marcelo Cárdenas López, Dairon Magnusson, William E Wittmann, Florian Pires Martins, Maria Sabatier, Daniel Irume, Victória Irume da Silva Guimarães, José Renan Molino, Jean-François Banki, Olaf Fernandez Piedade, Maria Teresa Pitman, Nigel C. A. Ferreira Ramos, José Monteagudo Mendoza, Abel Venticinque, Eduardo Martins Garcia Luize, Bruno Nuñez Vargas, Percy Freire Silva, Thiago Sanna Moraes de Leão Novo, Evlyn Márcia Costa Reis, Neidiane Farias Terborgh, John Manzatto, Angelo Gilberto Casula, Katia Regina Honorio Coronado, Eurídice N. Montero, Juan Carlos Duque, Alvaro Costa, Flávia R.C Castaño Arboleda, Nicolás Schöngart, Jochen Zartman, Charles Eugene Killeen, Timothy J. Marimon, Beatriz Schwantes Marimon-Junior, Ben Hur Vasquez, Rodolfo Mostacedo, Bonifacio Demarchi, Layon O. Feldpausch, Ted R. Engel, Julien Petronelli, Pascal et al., |
author_sort |
Ter Steege, Hans |
title |
Biased-corrected richness estimates for the Amazonian tree flora |
title_short |
Biased-corrected richness estimates for the Amazonian tree flora |
title_full |
Biased-corrected richness estimates for the Amazonian tree flora |
title_fullStr |
Biased-corrected richness estimates for the Amazonian tree flora |
title_full_unstemmed |
Biased-corrected richness estimates for the Amazonian tree flora |
title_sort |
biased-corrected richness estimates for the amazonian tree flora |
url |
http://agritrop.cirad.fr/605382/ http://agritrop.cirad.fr/605382/1/605382.pdf |
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dig-cirad-fr-6053822024-01-29T06:04:04Z http://agritrop.cirad.fr/605382/ http://agritrop.cirad.fr/605382/ Biased-corrected richness estimates for the Amazonian tree flora. Ter Steege Hans, Prado Paulo I., de Lima Renato A. F., Pos Edwin, de Souza Coelho Luiz, de Andrade Lima Filho Diogenes, Salomão Rafael P., Amaral Iêda Leão, de Almeida Matos Francisca Dionízia, Castilho Carolina V., Phillips Oliver L., Guevara Juan Ernesto, de Jesus Veiga Carim Marcelo, Cárdenas López Dairon, Magnusson William E, Wittmann Florian, Pires Martins Maria, Sabatier Daniel, Irume Victória Irume, da Silva Guimarães José Renan, Molino Jean-François, Banki Olaf, Fernandez Piedade Maria Teresa, Pitman Nigel C. A., Ferreira Ramos José, Monteagudo Mendoza Abel, Venticinque Eduardo Martins, Garcia Luize Bruno, Nuñez Vargas Percy, Freire Silva Thiago Sanna, Moraes de Leão Novo Evlyn Márcia, Costa Reis Neidiane Farias, Terborgh John, Manzatto Angelo Gilberto, Casula Katia Regina, Honorio Coronado Eurídice N., Montero Juan Carlos, Duque Alvaro, Costa Flávia R.C, Castaño Arboleda Nicolás, Schöngart Jochen, Zartman Charles Eugene, Killeen Timothy J., Marimon Beatriz Schwantes, Marimon-Junior Ben Hur, Vasquez Rodolfo, Mostacedo Bonifacio, Demarchi Layon O., Feldpausch Ted R., Engel Julien, Petronelli Pascal, et al.. 2020. Scientific Reports, 10 (1030), 13 p.https://doi.org/10.1038/s41598-020-66686-3 <https://doi.org/10.1038/s41598-020-66686-3> Biased-corrected richness estimates for the Amazonian tree flora Ter Steege, Hans Prado, Paulo I. de Lima, Renato A. F. Pos, Edwin de Souza Coelho, Luiz de Andrade Lima Filho, Diogenes Salomão, Rafael P. Amaral, Iêda Leão de Almeida Matos, Francisca Dionízia Castilho, Carolina V. Phillips, Oliver L. Guevara, Juan Ernesto de Jesus Veiga Carim, Marcelo Cárdenas López, Dairon Magnusson, William E Wittmann, Florian Pires Martins, Maria Sabatier, Daniel Irume, Victória Irume da Silva Guimarães, José Renan Molino, Jean-François Banki, Olaf Fernandez Piedade, Maria Teresa Pitman, Nigel C. A. Ferreira Ramos, José Monteagudo Mendoza, Abel Venticinque, Eduardo Martins Garcia Luize, Bruno Nuñez Vargas, Percy Freire Silva, Thiago Sanna Moraes de Leão Novo, Evlyn Márcia Costa Reis, Neidiane Farias Terborgh, John Manzatto, Angelo Gilberto Casula, Katia Regina Honorio Coronado, Eurídice N. Montero, Juan Carlos Duque, Alvaro Costa, Flávia R.C Castaño Arboleda, Nicolás Schöngart, Jochen Zartman, Charles Eugene Killeen, Timothy J. Marimon, Beatriz Schwantes Marimon-Junior, Ben Hur Vasquez, Rodolfo Mostacedo, Bonifacio Demarchi, Layon O. Feldpausch, Ted R. Engel, Julien Petronelli, Pascal et al., eng 2020 Scientific Reports flore taxonomie dynamique des populations modèle de simulation arbre forestier biodiversité forêt espèce distribution géographique distribution des populations identification base de données spatiale composition botanique http://aims.fao.org/aos/agrovoc/c_2983 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_6111 http://aims.fao.org/aos/agrovoc/c_24242 http://aims.fao.org/aos/agrovoc/c_3052 http://aims.fao.org/aos/agrovoc/c_33949 http://aims.fao.org/aos/agrovoc/c_3062 http://aims.fao.org/aos/agrovoc/c_7280 http://aims.fao.org/aos/agrovoc/c_5083 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_9000154 http://aims.fao.org/aos/agrovoc/c_15945 Amazonie France http://aims.fao.org/aos/agrovoc/c_32372 http://aims.fao.org/aos/agrovoc/c_3081 Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/605382/1/605382.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.1038/s41598-020-66686-3 10.1038/s41598-020-66686-3 info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-020-66686-3 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1038/s41598-020-66686-3 info:eu-repo/grantAgreement/EC/H2020/795114//(EU) The threat status of endemic Atlantic Forest trees/THREAT info:eu-repo/grantAgreement/EC/H2020/ANR-10-LABX-2501//(FRA) CEnter of the study of Biodiversity in Amazonia/CEBA |